BLASTX nr result

ID: Panax21_contig00023699 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023699
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300042.1| predicted protein [Populus trichocarpa] gi|2...   116   4e-39
ref|XP_003575367.1| PREDICTED: LOW QUALITY PROTEIN: polyribonucl...   117   6e-39
dbj|BAJ93434.1| predicted protein [Hordeum vulgare subsp. vulgare]    118   6e-39
gb|EEC73607.1| hypothetical protein OsI_08089 [Oryza sativa Indi...   119   1e-38
sp|Q6KAI0.1|PNP2_ORYSJ RecName: Full=Polyribonucleotide nucleoti...   119   1e-38

>ref|XP_002300042.1| predicted protein [Populus trichocarpa] gi|222847300|gb|EEE84847.1|
           predicted protein [Populus trichocarpa]
          Length = 961

 Score =  116 bits (291), Expect(2) = 4e-39
 Identities = 56/80 (70%), Positives = 67/80 (83%)
 Frame = -3

Query: 362 KAGKQKKERTLSMISEKTFEKIRNLSEAPIEAVFTDPTYGKFERGEALDNITKDVKQALE 183
           KAGK KK+  LS++S++T EK+RNL+EA IEAVFTDP+YGKFERGEALDNI ++ K+ LE
Sbjct: 275 KAGKHKKDYKLSLVSDRTLEKVRNLTEAKIEAVFTDPSYGKFERGEALDNIAQEAKRTLE 334

Query: 182 AECDEESLKVLSKTVDTVRK 123
            ECD ESL VLSK VD VRK
Sbjct: 335 EECDTESLTVLSKVVDRVRK 354



 Score = 70.1 bits (170), Expect(2) = 4e-39
 Identities = 32/41 (78%), Positives = 35/41 (85%)
 Frame = -1

Query: 124 KRRIIAEGLRLDGRHLDEVRPIYCEVGNLPVLHGSSLFSRG 2
           + RIIAEG R+DGR LDEVRP+YCE G LP LHGSSLFSRG
Sbjct: 358 RNRIIAEGFRVDGRRLDEVRPLYCEAGYLPNLHGSSLFSRG 398


>ref|XP_003575367.1| PREDICTED: LOW QUALITY PROTEIN: polyribonucleotide
           nucleotidyltransferase-like [Brachypodium distachyon]
          Length = 983

 Score =  117 bits (293), Expect(2) = 6e-39
 Identities = 59/81 (72%), Positives = 68/81 (83%)
 Frame = -3

Query: 362 KAGKQKKERTLSMISEKTFEKIRNLSEAPIEAVFTDPTYGKFERGEALDNITKDVKQALE 183
           +AGK+K+E  LSMIS+ ++EKIR LSEAPIE VFTD TYGKFERGEAL+ IT+ VK  LE
Sbjct: 284 RAGKEKREYKLSMISDGSYEKIRTLSEAPIEEVFTDKTYGKFERGEALEKITQSVKLKLE 343

Query: 182 AECDEESLKVLSKTVDTVRKE 120
            ECDEESLK LSK VDTVRK+
Sbjct: 344 DECDEESLKFLSKAVDTVRKQ 364



 Score = 68.6 bits (166), Expect(2) = 6e-39
 Identities = 30/41 (73%), Positives = 35/41 (85%)
 Frame = -1

Query: 124 KRRIIAEGLRLDGRHLDEVRPIYCEVGNLPVLHGSSLFSRG 2
           ++RII EGLRLDGR LDEVRP+YCE    P+LHGS+LFSRG
Sbjct: 367 RKRIIKEGLRLDGRQLDEVRPLYCESSTYPILHGSALFSRG 407


>dbj|BAJ93434.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 726

 Score =  118 bits (296), Expect(2) = 6e-39
 Identities = 58/81 (71%), Positives = 69/81 (85%)
 Frame = -3

Query: 362 KAGKQKKERTLSMISEKTFEKIRNLSEAPIEAVFTDPTYGKFERGEALDNITKDVKQALE 183
           +AGK+K+E  LSMIS++++EKIR LSEAPIE VFTD +YGKFERGEAL NIT+ VK+ LE
Sbjct: 21  RAGKEKREYKLSMISDESYEKIRTLSEAPIEEVFTDKSYGKFERGEALQNITESVKEKLE 80

Query: 182 AECDEESLKVLSKTVDTVRKE 120
            ECDEESLK L K VDTVRK+
Sbjct: 81  EECDEESLKFLPKAVDTVRKQ 101



 Score = 67.4 bits (163), Expect(2) = 6e-39
 Identities = 29/41 (70%), Positives = 35/41 (85%)
 Frame = -1

Query: 124 KRRIIAEGLRLDGRHLDEVRPIYCEVGNLPVLHGSSLFSRG 2
           ++RII EGLR+DGR LDEVRP+YCE    P+LHGS+LFSRG
Sbjct: 104 RKRIIKEGLRVDGRRLDEVRPLYCESSTYPILHGSALFSRG 144


>gb|EEC73607.1| hypothetical protein OsI_08089 [Oryza sativa Indica Group]
          Length = 1030

 Score =  119 bits (297), Expect(2) = 1e-38
 Identities = 58/81 (71%), Positives = 69/81 (85%)
 Frame = -3

Query: 362 KAGKQKKERTLSMISEKTFEKIRNLSEAPIEAVFTDPTYGKFERGEALDNITKDVKQALE 183
           +AGK+KKE  +S+IS+K++EKIR LSEAPIE VFTD TYGKFERGEAL+NIT+ VK  LE
Sbjct: 281 RAGKKKKEYKISLISDKSYEKIRTLSEAPIEEVFTDSTYGKFERGEALENITQSVKAKLE 340

Query: 182 AECDEESLKVLSKTVDTVRKE 120
            ECDE+SLK L K VDTVRK+
Sbjct: 341 EECDEDSLKFLHKAVDTVRKQ 361



 Score = 65.9 bits (159), Expect(2) = 1e-38
 Identities = 28/41 (68%), Positives = 35/41 (85%)
 Frame = -1

Query: 124 KRRIIAEGLRLDGRHLDEVRPIYCEVGNLPVLHGSSLFSRG 2
           ++RII +GLR+DGR LDEVRP+YCE    P+LHGS+LFSRG
Sbjct: 364 RKRIIEKGLRVDGRQLDEVRPLYCESSTYPILHGSALFSRG 404


>sp|Q6KAI0.1|PNP2_ORYSJ RecName: Full=Polyribonucleotide nucleotidyltransferase 2,
           mitochondrial; AltName: Full=Polynucleotide
           phosphorylase 2; Short=PNPase 2; Flags: Precursor
           gi|47847669|dbj|BAD21450.1| putative polyribonucleotide
           nucleotidyltransferase [Oryza sativa Japonica Group]
          Length = 982

 Score =  119 bits (297), Expect(2) = 1e-38
 Identities = 58/81 (71%), Positives = 69/81 (85%)
 Frame = -3

Query: 362 KAGKQKKERTLSMISEKTFEKIRNLSEAPIEAVFTDPTYGKFERGEALDNITKDVKQALE 183
           +AGK+KKE  +S+IS+K++EKIR LSEAPIE VFTD TYGKFERGEAL+NIT+ VK  LE
Sbjct: 287 RAGKKKKEYKISLISDKSYEKIRTLSEAPIEEVFTDSTYGKFERGEALENITQSVKAKLE 346

Query: 182 AECDEESLKVLSKTVDTVRKE 120
            ECDE+SLK L K VDTVRK+
Sbjct: 347 EECDEDSLKFLHKAVDTVRKQ 367



 Score = 65.9 bits (159), Expect(2) = 1e-38
 Identities = 28/41 (68%), Positives = 35/41 (85%)
 Frame = -1

Query: 124 KRRIIAEGLRLDGRHLDEVRPIYCEVGNLPVLHGSSLFSRG 2
           ++RII +GLR+DGR LDEVRP+YCE    P+LHGS+LFSRG
Sbjct: 370 RKRIIEKGLRVDGRQLDEVRPLYCESSTYPILHGSALFSRG 410


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