BLASTX nr result

ID: Panax21_contig00023673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023673
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150203.1| PREDICTED: CCR4-NOT transcription complex su...    90   2e-16
ref|XP_003549742.1| PREDICTED: CCR4-NOT transcription complex su...    84   1e-14
emb|CBI28248.3| unnamed protein product [Vitis vinifera]               80   1e-13
ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex su...    80   1e-13
emb|CAN83603.1| hypothetical protein VITISV_020807 [Vitis vinifera]    80   1e-13

>ref|XP_004150203.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like [Cucumis
           sativus]
          Length = 853

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 44/65 (67%), Positives = 55/65 (84%)
 Frame = +1

Query: 337 MDSRDSSSVTTPNRDTSSSPPEEDGSLSVTAALAKDAALLYQSGKFADCLKVLNQLLQKK 516
           MD+RDSSS +  NRD SSS  E+DG+LS+TAALA++AA L+QSGK+  C++VLNQLLQKK
Sbjct: 1   MDARDSSSSSALNRDGSSSAVEDDGALSITAALAREAASLFQSGKYVGCVEVLNQLLQKK 60

Query: 517 EGDPK 531
           E DPK
Sbjct: 61  EDDPK 65


>ref|XP_003549742.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like [Glycine
           max]
          Length = 857

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 44/68 (64%), Positives = 53/68 (77%), Gaps = 3/68 (4%)
 Frame = +1

Query: 337 MDSRD---SSSVTTPNRDTSSSPPEEDGSLSVTAALAKDAALLYQSGKFADCLKVLNQLL 507
           M+SRD   SS  +T NRD SS+   EDG  +V  ALAKDAAL +QSGKFA+C++VLNQLL
Sbjct: 1   MESRDLPSSSPSSTANRDASSATDAEDGVFTVAVALAKDAALHFQSGKFAECVEVLNQLL 60

Query: 508 QKKEGDPK 531
           QKK+GDPK
Sbjct: 61  QKKQGDPK 68


>emb|CBI28248.3| unnamed protein product [Vitis vinifera]
          Length = 812

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/65 (64%), Positives = 51/65 (78%)
 Frame = +1

Query: 337 MDSRDSSSVTTPNRDTSSSPPEEDGSLSVTAALAKDAALLYQSGKFADCLKVLNQLLQKK 516
           MDSRD+S  +   RD +S  P++D  LSV A+LAKDAALL+QS KF++CL VLNQLLQKK
Sbjct: 1   MDSRDTSLSSAATRDGAS--PDDDAGLSVAASLAKDAALLFQSRKFSECLDVLNQLLQKK 58

Query: 517 EGDPK 531
           E DPK
Sbjct: 59  EDDPK 63


>ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like [Vitis
           vinifera]
          Length = 857

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/65 (64%), Positives = 51/65 (78%)
 Frame = +1

Query: 337 MDSRDSSSVTTPNRDTSSSPPEEDGSLSVTAALAKDAALLYQSGKFADCLKVLNQLLQKK 516
           MDSRD+S  +   RD +S  P++D  LSV A+LAKDAALL+QS KF++CL VLNQLLQKK
Sbjct: 1   MDSRDTSLSSAATRDGAS--PDDDAGLSVAASLAKDAALLFQSRKFSECLDVLNQLLQKK 58

Query: 517 EGDPK 531
           E DPK
Sbjct: 59  EDDPK 63


>emb|CAN83603.1| hypothetical protein VITISV_020807 [Vitis vinifera]
          Length = 154

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/65 (64%), Positives = 51/65 (78%)
 Frame = +1

Query: 337 MDSRDSSSVTTPNRDTSSSPPEEDGSLSVTAALAKDAALLYQSGKFADCLKVLNQLLQKK 516
           MDSRD+S  +   RD +S  P++D  LSV A+LAKDAALL+QS KF++CL VLNQLLQKK
Sbjct: 1   MDSRDTSLSSAATRDGAS--PDDDAGLSVAASLAKDAALLFQSRKFSECLDVLNQLLQKK 58

Query: 517 EGDPK 531
           E DPK
Sbjct: 59  EDDPK 63


Top