BLASTX nr result
ID: Panax21_contig00023585
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00023585 (691 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK47703.1| unknown [Medicago truncatula] 124 1e-26 ref|XP_003610521.1| Ribosomal RNA processing protein-like protei... 124 1e-26 ref|XP_002318342.1| predicted protein [Populus trichocarpa] gi|2... 124 1e-26 ref|XP_002267225.2| PREDICTED: uncharacterized protein LOC100247... 120 3e-25 emb|CAN72961.1| hypothetical protein VITISV_016489 [Vitis vinifera] 120 3e-25 >gb|AFK47703.1| unknown [Medicago truncatula] Length = 546 Score = 124 bits (312), Expect = 1e-26 Identities = 74/159 (46%), Positives = 94/159 (59%) Frame = +3 Query: 3 SLLDSPKIAFKRTNPKKRKRVRSVDGQKSQYPELSGLGDXXXXXXXXXXXXXXXXXXXXX 182 SL +PK A + KKRKR ++ G+ SQ +L+G GD Sbjct: 413 SLCATPKAAGDVS--KKRKRTKNSKGKTSQDFDLNG-GDAED------------------ 451 Query: 183 XXXXGDAAAKTNEKSAKKVRFSIKNNLVWKPHSPMPPQDLRLPPSVTPRGSALKKGLSPG 362 A AK+ +KS+KKVRFS+KNNLVWKPHSP+PPQ LR+PPSVTPRGSALK+G+ PG Sbjct: 452 -----SAVAKSGDKSSKKVRFSMKNNLVWKPHSPLPPQSLRIPPSVTPRGSALKQGVPPG 506 Query: 363 PIREMPPATXXXXXXXXXXXXXXPISPSIKRLRKLQSLS 479 PIREMP + PS+KR++KL+SLS Sbjct: 507 PIREMPLQNKKAKLKKAGRRTIIGVVPSVKRMKKLRSLS 545 >ref|XP_003610521.1| Ribosomal RNA processing protein-like protein [Medicago truncatula] gi|355511576|gb|AES92718.1| Ribosomal RNA processing protein-like protein [Medicago truncatula] Length = 546 Score = 124 bits (312), Expect = 1e-26 Identities = 74/159 (46%), Positives = 94/159 (59%) Frame = +3 Query: 3 SLLDSPKIAFKRTNPKKRKRVRSVDGQKSQYPELSGLGDXXXXXXXXXXXXXXXXXXXXX 182 SL +PK A + KKRKR ++ G+ SQ +L+G GD Sbjct: 413 SLCATPKAAGDVS--KKRKRTKNSKGKTSQDFDLNG-GDAED------------------ 451 Query: 183 XXXXGDAAAKTNEKSAKKVRFSIKNNLVWKPHSPMPPQDLRLPPSVTPRGSALKKGLSPG 362 A AK+ +KS+KKVRFS+KNNLVWKPHSP+PPQ LR+PPSVTPRGSALK+G+ PG Sbjct: 452 -----SAVAKSGDKSSKKVRFSMKNNLVWKPHSPLPPQSLRIPPSVTPRGSALKQGVPPG 506 Query: 363 PIREMPPATXXXXXXXXXXXXXXPISPSIKRLRKLQSLS 479 PIREMP + PS+KR++KL+SLS Sbjct: 507 PIREMPLQNKKAKLKKAGRRTIIGVVPSVKRMKKLRSLS 545 >ref|XP_002318342.1| predicted protein [Populus trichocarpa] gi|222859015|gb|EEE96562.1| predicted protein [Populus trichocarpa] Length = 545 Score = 124 bits (312), Expect = 1e-26 Identities = 69/159 (43%), Positives = 90/159 (56%) Frame = +3 Query: 3 SLLDSPKIAFKRTNPKKRKRVRSVDGQKSQYPELSGLGDXXXXXXXXXXXXXXXXXXXXX 182 S+ D PK+ KKRKR + V+ ++S+ E +G D Sbjct: 407 SVCDFPKVTGNGNLSKKRKRAKRVELKQSENQESNGQEDDEAGT---------------- 450 Query: 183 XXXXGDAAAKTNEKSAKKVRFSIKNNLVWKPHSPMPPQDLRLPPSVTPRGSALKKGLSPG 362 AK+ EKSAKKVRFS+KNNL+WKP +P+PPQ LR+PPSVTPRGSALKKG+ PG Sbjct: 451 -----STMAKSTEKSAKKVRFSMKNNLIWKPSTPLPPQSLRIPPSVTPRGSALKKGIPPG 505 Query: 363 PIREMPPATXXXXXXXXXXXXXXPISPSIKRLRKLQSLS 479 P+REMP ISP+ KR++KL+SL+ Sbjct: 506 PVREMPAKKNMKQRAKSMKKVIKGISPATKRVKKLKSLA 544 >ref|XP_002267225.2| PREDICTED: uncharacterized protein LOC100247924 [Vitis vinifera] Length = 547 Score = 120 bits (300), Expect = 3e-25 Identities = 75/161 (46%), Positives = 87/161 (54%), Gaps = 3/161 (1%) Frame = +3 Query: 6 LLDSPKIAFKRTNPKKRKRVRSVDGQKSQYPELSGLGDXXXXXXXXXXXXXXXXXXXXXX 185 L DSP T KKRKR ++ + ++S GD Sbjct: 414 LCDSPTRPVNGTVSKKRKRAKN-----NNEHDVSSQGDDE-------------------- 448 Query: 186 XXXGDAAAKTNEKSAKKVRFSIKNNLVWKPHSPMPPQDLRLPPSVTPRGSALKKGLSPGP 365 A AK+ KSAKKV+FSIKNNLVWKP SP+PPQ LRLPPSVTPRGSALKKG+ PGP Sbjct: 449 ---SSALAKSKGKSAKKVKFSIKNNLVWKPQSPLPPQSLRLPPSVTPRGSALKKGIPPGP 505 Query: 366 IREMP---PATXXXXXXXXXXXXXXPISPSIKRLRKLQSLS 479 +REMP ISP+IKRL+KLQSLS Sbjct: 506 VREMPQTKKVKKRAKSLKKGRNGIKSISPAIKRLKKLQSLS 546 >emb|CAN72961.1| hypothetical protein VITISV_016489 [Vitis vinifera] Length = 547 Score = 120 bits (300), Expect = 3e-25 Identities = 75/161 (46%), Positives = 87/161 (54%), Gaps = 3/161 (1%) Frame = +3 Query: 6 LLDSPKIAFKRTNPKKRKRVRSVDGQKSQYPELSGLGDXXXXXXXXXXXXXXXXXXXXXX 185 L DSP T KKRKR ++ + ++S GD Sbjct: 414 LCDSPTRLVNGTVSKKRKRAKN-----NNEHDVSSQGDDE-------------------- 448 Query: 186 XXXGDAAAKTNEKSAKKVRFSIKNNLVWKPHSPMPPQDLRLPPSVTPRGSALKKGLSPGP 365 A AK+ KSAKKV+FSIKNNLVWKP SP+PPQ LRLPPSVTPRGSALKKG+ PGP Sbjct: 449 ---SSALAKSKGKSAKKVKFSIKNNLVWKPQSPLPPQSLRLPPSVTPRGSALKKGIPPGP 505 Query: 366 IREMP---PATXXXXXXXXXXXXXXPISPSIKRLRKLQSLS 479 +REMP ISP+IKRL+KLQSLS Sbjct: 506 VREMPQTKKVKKRAKSLKKGRNGIKSISPAIKRLKKLQSLS 546