BLASTX nr result

ID: Panax21_contig00023581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023581
         (1068 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276868.1| PREDICTED: nuclear cap-binding protein subun...   359   7e-97
gb|ACN43580.1| nuclear cap-binding protein [Solanum tuberosum]        345   1e-92
ref|XP_003543324.1| PREDICTED: nuclear cap-binding protein subun...   343   3e-92
gb|ACL54980.1| nuclear cap-binding protein CBP20 [Solanum tubero...   343   5e-92
gb|AFK38601.1| unknown [Lotus japonicus]                              341   2e-91

>ref|XP_002276868.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 1
           [Vitis vinifera] gi|359485224|ref|XP_003633238.1|
           PREDICTED: nuclear cap-binding protein subunit 2-like
           isoform 2 [Vitis vinifera]
           gi|359485226|ref|XP_003633239.1| PREDICTED: nuclear
           cap-binding protein subunit 2-like isoform 3 [Vitis
           vinifera]
          Length = 253

 Score =  359 bits (921), Expect = 7e-97
 Identities = 171/234 (73%), Positives = 192/234 (82%)
 Frame = +3

Query: 36  MALLFKDPNKISAYRDRRFQGTQEEFEHALLTSTTVYVGNMSFYTTEEQAYELFSRAGEI 215
           MALLFKDP+K+SAYRD+RF GTQE+FEHALLTS TVY+GNMSFYTTEEQ YELFSRAGEI
Sbjct: 1   MALLFKDPSKLSAYRDKRFPGTQEDFEHALLTSMTVYIGNMSFYTTEEQVYELFSRAGEI 60

Query: 216 KKIVMGLDKNTKTPCGFCFIMYYSREDAEDSAKYISGTILDDRPIRVDFDWGFXXXXXXX 395
           KKI+MGLDKN+KTPCGFCF++YYSR+DAED+ KYISGT+LDDRPIRVDFDWGF       
Sbjct: 61  KKIIMGLDKNSKTPCGFCFVLYYSRDDAEDAVKYISGTVLDDRPIRVDFDWGFQEGRQWG 120

Query: 396 XXXXXXXVRDEYRTDYDPGRGGYGKMVQKELEAQRELVDYGAGSLGSFPPVMPSQYGRNX 575
                  VRDEYRTDYDPGRGGYGK+VQ+ELEAQR+LVDYG+GSLGSFPPVMPSQYGR+ 
Sbjct: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQRELEAQRQLVDYGSGSLGSFPPVMPSQYGRH- 179

Query: 576 XXXXXXXXXXXXXXXXXXKRHREDDRHGPEISKRTSEQNPRRNSDHDSRPEKNP 737
                             KRHR+DDRH  + SKRTS+ + RRNSDHDSRPEKNP
Sbjct: 180 GGSQGHGGSNRHSRDYPRKRHRDDDRHSHDFSKRTSDHDSRRNSDHDSRPEKNP 233


>gb|ACN43580.1| nuclear cap-binding protein [Solanum tuberosum]
          Length = 255

 Score =  345 bits (884), Expect = 1e-92
 Identities = 172/235 (73%), Positives = 183/235 (77%), Gaps = 1/235 (0%)
 Frame = +3

Query: 36  MALLFKDPNKISAYRDRRFQGTQEEFEHALLTSTTVYVGNMSFYTTEEQAYELFSRAGEI 215
           MA LFKD  KISAYRDRRF GTQEEFE ALL S TVYVGNMSFYTTEEQ YELFSRAGEI
Sbjct: 1   MASLFKDLAKISAYRDRRFPGTQEEFEDALLRSITVYVGNMSFYTTEEQVYELFSRAGEI 60

Query: 216 KKIVMGLDKNTKTPCGFCFIMYYSREDAEDSAKYISGTILDDRPIRVDFDWGFXXXXXXX 395
           KKIVMGLDKN+KTPCGFCFIMYYSR+DAEDS KYISGTILDDRPIRVDFDWGF       
Sbjct: 61  KKIVMGLDKNSKTPCGFCFIMYYSRDDAEDSVKYISGTILDDRPIRVDFDWGFQEGRQWG 120

Query: 396 XXXXXXXVRDEYRTDYDPGRGGYGKMVQKELEAQRELVDYGAGSLGSFPPVMPS-QYGRN 572
                  VRDEYRTDYDPGRGGYGK+VQKELEAQR+LVDYG GSLG++PPVMPS  YGR+
Sbjct: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGAYPPVMPSPHYGRH 180

Query: 573 XXXXXXXXXXXXXXXXXXXKRHREDDRHGPEISKRTSEQNPRRNSDHDSRPEKNP 737
                              KRHREDD H P+  KRT ++  RRNSDH+SRPEKNP
Sbjct: 181 NGGNHGRGGSYRHGREYHRKRHREDDHHRPDYPKRTYDRESRRNSDHESRPEKNP 235


>ref|XP_003543324.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Glycine max]
          Length = 258

 Score =  343 bits (881), Expect = 3e-92
 Identities = 170/238 (71%), Positives = 186/238 (78%), Gaps = 4/238 (1%)
 Frame = +3

Query: 36  MALLFKDPNKISAYRDRRFQGTQEEFEHALLTSTTVYVGNMSFYTTEEQAYELFSRAGEI 215
           MALLFKDP+KISAYRDRRF GTQEEFEHAL+TSTTVYVGNMSFYTTEEQ YELFSR GEI
Sbjct: 1   MALLFKDPSKISAYRDRRFPGTQEEFEHALVTSTTVYVGNMSFYTTEEQVYELFSRTGEI 60

Query: 216 KKIVMGLDKNTKTPCGFCFIMYYSREDAEDSAKYISGTILDDRPIRVDFDWGFXXXXXXX 395
           KKI+MGLDKNTKTPCGFCF++YYSRED ED+ KYISGTILDDRPIRVDFDWGF       
Sbjct: 61  KKIIMGLDKNTKTPCGFCFVLYYSREDTEDACKYISGTILDDRPIRVDFDWGFQEGRQWG 120

Query: 396 XXXXXXXVRDEYRTDYDPG---RGGYGKMVQKELEAQRELVDYGAGSLGSFPPVMPSQYG 566
                  VRDEYRTDYDP     GGYGK+VQKELE QR+LVDYGAGSLGSFPPV+P+ YG
Sbjct: 121 RGRSGGQVRDEYRTDYDPDILLLGGYGKLVQKELEVQRQLVDYGAGSLGSFPPVIPTSYG 180

Query: 567 RN-XXXXXXXXXXXXXXXXXXXKRHREDDRHGPEISKRTSEQNPRRNSDHDSRPEKNP 737
           R+                    KRHR+D+RH  E SKRTS+   RRN+DH+SRPEKNP
Sbjct: 181 RHGGGGGHGHGGSHRHGRDYYRKRHRDDERHTHESSKRTSDHESRRNTDHESRPEKNP 238


>gb|ACL54980.1| nuclear cap-binding protein CBP20 [Solanum tuberosum]
           gi|219944399|gb|ACL54981.1| nuclear cap-binding protein
           CBP20 [Solanum tuberosum] gi|224460063|gb|ACN43582.1|
           nuclear cap-binding protein [Solanum tuberosum]
           gi|262065509|gb|ACY07775.1| CBP20 protein [Solanum
           tuberosum]
          Length = 255

 Score =  343 bits (879), Expect = 5e-92
 Identities = 171/235 (72%), Positives = 182/235 (77%), Gaps = 1/235 (0%)
 Frame = +3

Query: 36  MALLFKDPNKISAYRDRRFQGTQEEFEHALLTSTTVYVGNMSFYTTEEQAYELFSRAGEI 215
           MA LFKD  KISAYRDRRF GTQEEFE ALL S TVYVGNMSFYTTEEQ YELFSRAGEI
Sbjct: 1   MASLFKDLAKISAYRDRRFPGTQEEFEDALLRSITVYVGNMSFYTTEEQVYELFSRAGEI 60

Query: 216 KKIVMGLDKNTKTPCGFCFIMYYSREDAEDSAKYISGTILDDRPIRVDFDWGFXXXXXXX 395
           KKIVMGLDKN+KTPCGFCFIMYYSR+DAEDS KYISGTILDDRPIRVDFDWGF       
Sbjct: 61  KKIVMGLDKNSKTPCGFCFIMYYSRDDAEDSVKYISGTILDDRPIRVDFDWGFQEGRQWG 120

Query: 396 XXXXXXXVRDEYRTDYDPGRGGYGKMVQKELEAQRELVDYGAGSLGSFPPVM-PSQYGRN 572
                  VRDEYRTDYDPGRGGYGK+VQKELEAQR+LVDYG GSLG++PPVM P  YGR+
Sbjct: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGAYPPVMPPPHYGRH 180

Query: 573 XXXXXXXXXXXXXXXXXXXKRHREDDRHGPEISKRTSEQNPRRNSDHDSRPEKNP 737
                              KRHREDD H P+  KRT ++  RRNSDH+SRPEKNP
Sbjct: 181 NGGNHGRGGSYRHGRDYQRKRHREDDHHRPDYPKRTYDRESRRNSDHESRPEKNP 235


>gb|AFK38601.1| unknown [Lotus japonicus]
          Length = 253

 Score =  341 bits (874), Expect = 2e-91
 Identities = 166/234 (70%), Positives = 183/234 (78%)
 Frame = +3

Query: 36  MALLFKDPNKISAYRDRRFQGTQEEFEHALLTSTTVYVGNMSFYTTEEQAYELFSRAGEI 215
           MA LFKD  K+SAYRDRRF GTQ+EFE ALL STTVYVGNMSFYTTEEQ YELFSRAGEI
Sbjct: 1   MATLFKDLTKLSAYRDRRFPGTQDEFEQALLASTTVYVGNMSFYTTEEQVYELFSRAGEI 60

Query: 216 KKIVMGLDKNTKTPCGFCFIMYYSREDAEDSAKYISGTILDDRPIRVDFDWGFXXXXXXX 395
           KKI+MGLDKNTKTPCGFCF++YYSRED ED+ KY+SGTILDDRPIRVDFDWGF       
Sbjct: 61  KKIIMGLDKNTKTPCGFCFVLYYSREDTEDACKYVSGTILDDRPIRVDFDWGFQEGRQWG 120

Query: 396 XXXXXXXVRDEYRTDYDPGRGGYGKMVQKELEAQRELVDYGAGSLGSFPPVMPSQYGRNX 575
                  VRDEYRTDYDPGRGGYGK+VQKELEAQR+LVDYG+GSLGSFPP++ + YGR+ 
Sbjct: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGSGSLGSFPPMVSTSYGRH- 179

Query: 576 XXXXXXXXXXXXXXXXXXKRHREDDRHGPEISKRTSEQNPRRNSDHDSRPEKNP 737
                             KRHR+DD H  E SKRTS+   RRNSDH+SRPEKNP
Sbjct: 180 GRNHGHGGSHRPGRDYHRKRHRDDDHHTNESSKRTSDHESRRNSDHESRPEKNP 233


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