BLASTX nr result

ID: Panax21_contig00023558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023558
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316622.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002334289.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_002316621.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
emb|CBI23554.3| unnamed protein product [Vitis vinifera]              107   8e-22
emb|CBI23454.3| unnamed protein product [Vitis vinifera]              107   8e-22

>ref|XP_002316622.1| predicted protein [Populus trichocarpa] gi|222859687|gb|EEE97234.1|
           predicted protein [Populus trichocarpa]
          Length = 641

 Score =  115 bits (288), Expect = 4e-24
 Identities = 63/121 (52%), Positives = 81/121 (66%), Gaps = 5/121 (4%)
 Frame = +1

Query: 1   AWKNWRDGRASDVIDPVLRQGAGSIYNITRCIHIALLCVQENIADRPTMALVILMLGSVS 180
           AW+NWR+G A D+IDPVL   +GS   + RCIHI LLCVQEN+A+RPTMA V+LML S S
Sbjct: 526 AWRNWREGTAQDIIDPVL--SSGSATEMLRCIHIGLLCVQENVAERPTMASVVLMLSSSS 583

Query: 181 LTLGVPSEPAFFYNTS-----MSASREYTXXXXXXXXXXXXXNMPAQLSQNEVSVTELSA 345
           LTL +PS+PAFF N+S     +S+S E+              ++   LS+NEVS+TEL  
Sbjct: 584 LTLQIPSQPAFFMNSSTYQSDLSSSMEHN---SRVTESSLSESVAIPLSKNEVSITELYP 640

Query: 346 R 348
           R
Sbjct: 641 R 641


>ref|XP_002334289.1| predicted protein [Populus trichocarpa] gi|222870672|gb|EEF07803.1|
           predicted protein [Populus trichocarpa]
          Length = 638

 Score =  114 bits (286), Expect = 6e-24
 Identities = 63/121 (52%), Positives = 80/121 (66%), Gaps = 5/121 (4%)
 Frame = +1

Query: 1   AWKNWRDGRASDVIDPVLRQGAGSIYNITRCIHIALLCVQENIADRPTMALVILMLGSVS 180
           AW+NWR+G A D+IDPVL   +GS   + RCIHI LLCVQEN+A+RPTMA V+LML S S
Sbjct: 522 AWRNWREGTAQDIIDPVL--SSGSATEMLRCIHIGLLCVQENVAERPTMASVVLMLSSSS 579

Query: 181 LTLGVPSEPAFFYNTS-----MSASREYTXXXXXXXXXXXXXNMPAQLSQNEVSVTELSA 345
           LTL +PS+PAFF N+S     +S+S  +               +P  LS+NEVS+TEL  
Sbjct: 580 LTLQIPSQPAFFMNSSTYQSDLSSSMGHNSRVTESSLSESEVMIP--LSKNEVSITELYP 637

Query: 346 R 348
           R
Sbjct: 638 R 638


>ref|XP_002316621.1| predicted protein [Populus trichocarpa] gi|222859686|gb|EEE97233.1|
           predicted protein [Populus trichocarpa]
          Length = 637

 Score =  111 bits (277), Expect = 7e-23
 Identities = 61/118 (51%), Positives = 75/118 (63%), Gaps = 2/118 (1%)
 Frame = +1

Query: 1   AWKNWRDGRASDVIDPVLRQGAGSIYNITRCIHIALLCVQENIADRPTMALVILMLGSVS 180
           AW+NWR+G A D+IDPVL   +GS   + RCIHI LLCVQEN+A+RPTMA V+LML S S
Sbjct: 522 AWRNWREGTAQDMIDPVL--SSGSATEMMRCIHIGLLCVQENVAERPTMASVVLMLSSSS 579

Query: 181 LTLGVPSEPAFFYNTS--MSASREYTXXXXXXXXXXXXXNMPAQLSQNEVSVTELSAR 348
           LTL +PS+PAFF N+S   S                   +    LS+NEVS+TEL  R
Sbjct: 580 LTLQIPSQPAFFMNSSTYQSDLSSSMGHNSRVTESSLCESEAIPLSENEVSITELYPR 637


>emb|CBI23554.3| unnamed protein product [Vitis vinifera]
          Length = 247

 Score =  107 bits (268), Expect = 8e-22
 Identities = 57/117 (48%), Positives = 74/117 (63%), Gaps = 1/117 (0%)
 Frame = +1

Query: 1   AWKNWRDGRASDVIDPVLRQGAGSIYNITRCIHIALLCVQENIADRPTMALVILMLGSVS 180
           AWKNWR+G+A++V+DP +  G GS   I RCIHI LLCVQEN ADRPTMA ++LML S S
Sbjct: 133 AWKNWREGKATNVMDPTM--GIGSTSEIMRCIHIGLLCVQENEADRPTMASIVLMLNSYS 190

Query: 181 LTLGVPSEPAFFYNTSMSASREY-TXXXXXXXXXXXXXNMPAQLSQNEVSVTELSAR 348
           L+L +PS+PAFF N+ M+                    +  A+ S NE S+T+L  R
Sbjct: 191 LSLPLPSQPAFFMNSGMNGDLPLELEDNSSVTKSDHSQSKSAKFSANEASITDLYPR 247


>emb|CBI23454.3| unnamed protein product [Vitis vinifera]
          Length = 647

 Score =  107 bits (268), Expect = 8e-22
 Identities = 57/117 (48%), Positives = 74/117 (63%), Gaps = 1/117 (0%)
 Frame = +1

Query: 1   AWKNWRDGRASDVIDPVLRQGAGSIYNITRCIHIALLCVQENIADRPTMALVILMLGSVS 180
           AWKNWR+G+A++V+DP +  G GS   I RCIHI LLCVQEN ADRPTMA ++LML S S
Sbjct: 533 AWKNWREGKATNVMDPTM--GIGSTSEIMRCIHIGLLCVQENEADRPTMASIVLMLNSYS 590

Query: 181 LTLGVPSEPAFFYNTSMSASREY-TXXXXXXXXXXXXXNMPAQLSQNEVSVTELSAR 348
           L+L +PS+PAFF N+ M+                    +  A+ S NE S+T+L  R
Sbjct: 591 LSLPLPSQPAFFMNSGMNGDLPLELEDNSSVTKSDHSQSKSAKFSANEASITDLYPR 647



 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/77 (63%), Positives = 61/77 (79%)
 Frame = +1

Query: 1   AWKNWRDGRASDVIDPVLRQGAGSIYNITRCIHIALLCVQENIADRPTMALVILMLGSVS 180
           AW++WRDG A +VIDP +  G+ S   I RCIHI LLCVQEN+ADRPTMA V+LML S S
Sbjct: 235 AWRSWRDGSAPNVIDPSVSSGSRS--EIMRCIHIGLLCVQENVADRPTMASVVLMLSSYS 292

Query: 181 LTLGVPSEPAFFYNTSM 231
           +TL +PS+PAFF ++SM
Sbjct: 293 ITLPLPSQPAFFMHSSM 309


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