BLASTX nr result
ID: Panax21_contig00023557
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00023557 (523 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266157.1| PREDICTED: ATP-dependent RNA helicase DBP2 [... 87 2e-15 ref|XP_002326066.1| predicted protein [Populus trichocarpa] gi|2... 85 6e-15 ref|XP_002523955.1| dead box ATP-dependent RNA helicase, putativ... 83 2e-14 ref|XP_002319430.1| predicted protein [Populus trichocarpa] gi|2... 79 5e-13 ref|XP_001786160.1| predicted protein [Physcomitrella patens sub... 67 2e-09 >ref|XP_002266157.1| PREDICTED: ATP-dependent RNA helicase DBP2 [Vitis vinifera] gi|297745752|emb|CBI15808.3| unnamed protein product [Vitis vinifera] Length = 568 Score = 86.7 bits (213), Expect = 2e-15 Identities = 45/83 (54%), Positives = 55/83 (66%) Frame = -2 Query: 522 FLVAQIRKAISDVQSGNTVAFATGKVXXXXXXXXXXXXXXXXXALSKQPSMGQMSINVED 343 FLVA IRKAI+DV SGNTVAFATGKV ALS MG S+N+E+ Sbjct: 486 FLVAHIRKAIADVGSGNTVAFATGKVARKKEREAAAAQKEARIALSNLSLMGPTSLNIEE 545 Query: 342 KYKYMIAPTMAKKEGSADDAWDD 274 KY++M++P+ K EG+ADDAWDD Sbjct: 546 KYRFMMSPSSIKTEGAADDAWDD 568 >ref|XP_002326066.1| predicted protein [Populus trichocarpa] gi|222862941|gb|EEF00448.1| predicted protein [Populus trichocarpa] Length = 530 Score = 85.1 bits (209), Expect = 6e-15 Identities = 46/83 (55%), Positives = 55/83 (66%) Frame = -2 Query: 522 FLVAQIRKAISDVQSGNTVAFATGKVXXXXXXXXXXXXXXXXXALSKQPSMGQMSINVED 343 FLVAQI+KAI+DV+SGNTVAFATGK ALSK MG IN+ED Sbjct: 450 FLVAQIKKAIADVESGNTVAFATGKAARRKEREAAASQKEARNALSKV--MGSTCINIED 507 Query: 342 KYKYMIAPTMAKKEGSADDAWDD 274 KY++MIAP++ EG+AD AWDD Sbjct: 508 KYRFMIAPSVITSEGAADSAWDD 530 >ref|XP_002523955.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] gi|223536802|gb|EEF38442.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] Length = 564 Score = 83.2 bits (204), Expect = 2e-14 Identities = 46/83 (55%), Positives = 54/83 (65%) Frame = -2 Query: 522 FLVAQIRKAISDVQSGNTVAFATGKVXXXXXXXXXXXXXXXXXALSKQPSMGQMSINVED 343 FLVAQI+KAI+DV+SGNTVAFATGKV LSK +G SIN+ED Sbjct: 484 FLVAQIKKAIADVKSGNTVAFATGKVARRKEREAAASQKEARNDLSK--LLGPTSINIED 541 Query: 342 KYKYMIAPTMAKKEGSADDAWDD 274 KY++MIA + K EG AD AWDD Sbjct: 542 KYRFMIASSNTKGEGVADSAWDD 564 >ref|XP_002319430.1| predicted protein [Populus trichocarpa] gi|222857806|gb|EEE95353.1| predicted protein [Populus trichocarpa] Length = 559 Score = 78.6 bits (192), Expect = 5e-13 Identities = 43/85 (50%), Positives = 53/85 (62%), Gaps = 2/85 (2%) Frame = -2 Query: 522 FLVAQIRKAISDVQSGNTVAFATGKVXXXXXXXXXXXXXXXXXALSKQPSM--GQMSINV 349 FLVAQI+KAI+DV+SGNTVAFATGK PS G IN+ Sbjct: 478 FLVAQIKKAIADVESGNTVAFATGKTARRKEREAAAALHKEAR---NDPSKVTGPACINI 534 Query: 348 EDKYKYMIAPTMAKKEGSADDAWDD 274 EDKY++M+AP++ K EG+AD AWDD Sbjct: 535 EDKYRFMMAPSIIKSEGAADSAWDD 559 >ref|XP_001786160.1| predicted protein [Physcomitrella patens subsp. patens] gi|162662029|gb|EDQ49028.1| predicted protein [Physcomitrella patens subsp. patens] Length = 377 Score = 67.0 bits (162), Expect = 2e-09 Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 2/85 (2%) Frame = -2 Query: 522 FLVAQIRKAISDVQSGNTVAFATGKVXXXXXXXXXXXXXXXXXALSKQPSMGQMSINVED 343 FLVAQIR+AI++ +SGNT+AFATGK +G ++ V+D Sbjct: 293 FLVAQIRRAITEAESGNTMAFATGKAARRKEREQAAAFREGRMTPLGVAQVGATTVRVDD 352 Query: 342 KYKYMIAPTM--AKKEGSADDAWDD 274 KYK+M++ T K EG+ADDAW+D Sbjct: 353 KYKHMLSATADPKKGEGAADDAWED 377