BLASTX nr result

ID: Panax21_contig00023556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023556
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004174042.1| PREDICTED: probable ion channel CASTOR-like,...    68   9e-10
ref|XP_004135518.1| PREDICTED: ion channel CASTOR-like [Cucumis ...    68   9e-10
ref|XP_002330696.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
gb|ADC36212.1| CASTOR [Medicago truncatula]                            67   2e-09
ref|XP_003554802.1| PREDICTED: ion channel CASTOR [Glycine max]        66   3e-09

>ref|XP_004174042.1| PREDICTED: probable ion channel CASTOR-like, partial [Cucumis
           sativus]
          Length = 132

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = -2

Query: 356 VWRGNLPKDLIVAKSAERILFCGWRRDMEDMVMVI 252
           VWRG+LPKD IV KSAERIL CGWRRDMEDM+MV+
Sbjct: 4   VWRGSLPKDFIVPKSAERILLCGWRRDMEDMIMVL 38


>ref|XP_004135518.1| PREDICTED: ion channel CASTOR-like [Cucumis sativus]
          Length = 882

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = -2

Query: 356 VWRGNLPKDLIVAKSAERILFCGWRRDMEDMVMVI 252
           VWRG+LPKD IV KSAERIL CGWRRDMEDM+MV+
Sbjct: 594 VWRGSLPKDFIVPKSAERILLCGWRRDMEDMIMVL 628


>ref|XP_002330696.1| predicted protein [Populus trichocarpa] gi|222872300|gb|EEF09431.1|
           predicted protein [Populus trichocarpa]
          Length = 884

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = -2

Query: 356 VWRGNLPKDLIVAKSAERILFCGWRRDMEDMVMVI 252
           VWRG+LPKD IV K AERILFCGWRRDMEDM+MV+
Sbjct: 597 VWRGSLPKDSIVPKPAERILFCGWRRDMEDMIMVL 631


>gb|ADC36212.1| CASTOR [Medicago truncatula]
          Length = 824

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = -2

Query: 356 VWRGNLPKDLIVAKSAERILFCGWRRDMEDMVMVI 252
           VWRG+LPKD +  +SAERILFCGWRRDMEDM+MV+
Sbjct: 536 VWRGSLPKDFVFPRSAERILFCGWRRDMEDMIMVL 570


>ref|XP_003554802.1| PREDICTED: ion channel CASTOR [Glycine max]
          Length = 846

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = -2

Query: 356 VWRGNLPKDLIVAKSAERILFCGWRRDMEDMVMVILQGIYYAS 228
           VWRG+LPKD +  KS ERILFCGWRRDMEDM+MV+   + + S
Sbjct: 558 VWRGSLPKDFVYPKSPERILFCGWRRDMEDMIMVLDASLAHGS 600


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