BLASTX nr result

ID: Panax21_contig00023534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023534
         (1295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632043.1| PREDICTED: LOW QUALITY PROTEIN: Werner Syndr...   355   1e-95
emb|CBI17293.3| unnamed protein product [Vitis vinifera]              290   4e-76
ref|XP_002328909.1| predicted protein [Populus trichocarpa] gi|2...   285   1e-74
ref|XP_004171094.1| PREDICTED: Werner Syndrome-like exonuclease-...   283   9e-74
ref|XP_004133981.1| PREDICTED: Werner Syndrome-like exonuclease-...   280   4e-73

>ref|XP_003632043.1| PREDICTED: LOW QUALITY PROTEIN: Werner Syndrome-like exonuclease-like
            [Vitis vinifera]
          Length = 331

 Score =  355 bits (911), Expect = 1e-95
 Identities = 182/298 (61%), Positives = 216/298 (72%)
 Frame = -3

Query: 1212 DWDQPFTDQELQAIVAAFQXXXXXXSIKCPDTGNCAEQRPKTRRRLPDSLSGSQQQHPFT 1033
            DWDQP T Q+L+ + A         S   P T   A+ R K RRRLP+S+  ++    F 
Sbjct: 23   DWDQPMTQQQLEELDAIESAFRSQTSSSTP-TSQEADDRRKIRRRLPNSIGSNRCPSAFK 81

Query: 1032 GNSSSPFSLAPCPRNWLNKICLSTHQAKSMMRYPQITFGGKIVYSRTVSEVEKASEELLK 853
            G   + FSL+PCP N    +  S  Q    MR P+I FGG IVYSRTV+EVEKA+ ELLK
Sbjct: 82   GRDLNSFSLSPCPTNRFLNLFHSPCQENFKMRLPKINFGGHIVYSRTVTEVEKATAELLK 141

Query: 852  FVEAKKRGAGRTVLGFDIEWKPTFKRGVKPGKAAVMQICGDKSHCHVMHIIHTGIPQKLR 673
             VE KK+  G+ +LGFDIEW+PTF++GV  GKAAVMQICG  SHC+VMHIIH+GIP+ L 
Sbjct: 142  IVETKKKELGQAILGFDIEWRPTFRKGVSQGKAAVMQICGGNSHCYVMHIIHSGIPRNLX 201

Query: 672  SLLEDPTSVKVGVCIANDATKVFRDHKVSVEALEDLSKLANQKLGGDPKSWSLGLLTEML 493
            SLLEDPTS+KVGV IANDA KVF+DH VSV+ LEDLS LANQKLGGD K W LG LTEML
Sbjct: 202  SLLEDPTSIKVGVGIANDAVKVFKDHSVSVKDLEDLSYLANQKLGGDAKKWGLGSLTEML 261

Query: 492  ICKKLPKPSHIRVGNWEAAVLSEAQLQYAATDAFASWYIYEALKKLPDPVDNKSEKPE 319
            I K+L KP+ IR+GNWEA VLS+AQL+YAATDAFASWY+YE LK  PD  +NK E+ E
Sbjct: 262  ISKQLLKPNKIRLGNWEADVLSKAQLEYAATDAFASWYLYEVLKSFPDTAENKIEELE 319


>emb|CBI17293.3| unnamed protein product [Vitis vinifera]
          Length = 301

 Score =  290 bits (743), Expect = 4e-76
 Identities = 159/298 (53%), Positives = 190/298 (63%)
 Frame = -3

Query: 1212 DWDQPFTDQELQAIVAAFQXXXXXXSIKCPDTGNCAEQRPKTRRRLPDSLSGSQQQHPFT 1033
            DWDQP T Q+L+ + A         S   P T   A+ R K RRRLP+S+  ++    F 
Sbjct: 23   DWDQPMTQQQLEELDAIESAFRSQTSSSTP-TSQEADDRRKIRRRLPNSIGSNRCPSAFK 81

Query: 1032 GNSSSPFSLAPCPRNWLNKICLSTHQAKSMMRYPQITFGGKIVYSRTVSEVEKASEELLK 853
            G   + FSL+PCP N    +  S  Q    MR P+I FGG IVYSRTV+EVEKA+ ELLK
Sbjct: 82   GRDLNSFSLSPCPTNRFLNLFHSPCQENFKMRLPKINFGGHIVYSRTVTEVEKATAELLK 141

Query: 852  FVEAKKRGAGRTVLGFDIEWKPTFKRGVKPGKAAVMQICGDKSHCHVMHIIHTGIPQKLR 673
             VE KK+  G+ +LGFDIEW+PTF++GV  GKAA                          
Sbjct: 142  IVETKKKELGQAILGFDIEWRPTFRKGVSQGKAA-------------------------- 175

Query: 672  SLLEDPTSVKVGVCIANDATKVFRDHKVSVEALEDLSKLANQKLGGDPKSWSLGLLTEML 493
                DPTS+KVGV IANDA KVF+DH VSV+ LEDLS LANQKLGGD K W LG LTEML
Sbjct: 176  ----DPTSIKVGVGIANDAVKVFKDHSVSVKDLEDLSYLANQKLGGDAKKWGLGSLTEML 231

Query: 492  ICKKLPKPSHIRVGNWEAAVLSEAQLQYAATDAFASWYIYEALKKLPDPVDNKSEKPE 319
            I K+L KP+ IR+GNWEA VLS+AQL+YAATDAFASWY+YE LK  PD  +NK E+ E
Sbjct: 232  ISKQLLKPNKIRLGNWEADVLSKAQLEYAATDAFASWYLYEVLKSFPDTAENKIEELE 289


>ref|XP_002328909.1| predicted protein [Populus trichocarpa] gi|222839339|gb|EEE77676.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  285 bits (730), Expect = 1e-74
 Identities = 157/312 (50%), Positives = 196/312 (62%), Gaps = 21/312 (6%)
 Frame = -3

Query: 1212 DWDQPFTDQELQ---AIVAAFQXXXXXXSIKCPDTGNCA------------------EQR 1096
            DWDQP TDQEL+   AI A+FQ      S     +   A                  ++ 
Sbjct: 21   DWDQPLTDQELEAIDAIEASFQSSTPSSSSSSSSSTPAATTPSSSIINKRHSSPQKDQEP 80

Query: 1095 PKTRRRLPDSLSGSQQQHPFTGNSSSPFSLAPCPRNWLNKICLSTHQAKSMMRYPQITFG 916
            PKTRR+LP+S+           + S PFSL+PC             Q    MRYP + FG
Sbjct: 81   PKTRRQLPNSIF----------SLSKPFSLSPC-------------QGNVKMRYPAMKFG 117

Query: 915  GKIVYSRTVSEVEKASEELLKFVEAKKRGAGRTVLGFDIEWKPTFKRGVKPGKAAVMQIC 736
            G+I+YSRT  EVEKA+ ELL+ +EA+KR   R ++GFDIEWKP+F  GV PGKAAVMQIC
Sbjct: 118  GQILYSRTSIEVEKAARELLQSLEAEKREMDRVIIGFDIEWKPSFTTGVLPGKAAVMQIC 177

Query: 735  GDKSHCHVMHIIHTGIPQKLRSLLEDPTSVKVGVCIANDATKVFRDHKVSVEALEDLSKL 556
             + S CHVMHI H+GI   L+ LLED   VKVG+ I  D  KVFRD+  SV+++EDLS L
Sbjct: 178  ANTSLCHVMHIFHSGITPSLQFLLEDSKLVKVGIGIGGDCAKVFRDYNASVKSVEDLSYL 237

Query: 555  ANQKLGGDPKSWSLGLLTEMLICKKLPKPSHIRVGNWEAAVLSEAQLQYAATDAFASWYI 376
            ANQKL G PK+W L  L ++L+CK+L KP+ IR+GNW+  VLS+ QLQYAATDAFASW +
Sbjct: 238  ANQKLDGKPKTWGLQALAKILVCKELQKPNKIRLGNWQVDVLSKEQLQYAATDAFASWQL 297

Query: 375  YEALKKLPDPVD 340
            Y+ LK LPD  D
Sbjct: 298  YQVLKSLPDAKD 309


>ref|XP_004171094.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
          Length = 314

 Score =  283 bits (723), Expect = 9e-74
 Identities = 155/294 (52%), Positives = 196/294 (66%), Gaps = 6/294 (2%)
 Frame = -3

Query: 1215 SDWDQPFTDQELQAIVA---AFQXXXXXXSI--KCPDTGNCAEQRPKTRRRLPDSLSGSQ 1051
            S++DQPFT+Q+LQAI A   A+Q            PD    +   P T RRLP S+   Q
Sbjct: 31   SEFDQPFTEQQLQAIEAIEAAYQSTSAKKRRPNSTPDGNEVSCVSPDTGRRLPRSIFSHQ 90

Query: 1050 QQHPFTGNSSSPFS-LAPCPRNWLNKICLSTHQAKSMMRYPQITFGGKIVYSRTVSEVEK 874
                     S  FS L+PC  N             S MR+P + +GG+I+YSRTVSEV++
Sbjct: 91   ---------SPRFSPLSPCRVN-------------SKMRFPALNYGGRIIYSRTVSEVDR 128

Query: 873  ASEELLKFVEAKKRGAGRTVLGFDIEWKPTFKRGVKPGKAAVMQICGDKSHCHVMHIIHT 694
            AS EL K + + ++   +  +GFDIEW+P+FKRGV PGKAAVMQ+C + S CHVMHIIH+
Sbjct: 129  ASRELAKKINSTRKAMDQITIGFDIEWRPSFKRGVPPGKAAVMQLCLENSECHVMHIIHS 188

Query: 693  GIPQKLRSLLEDPTSVKVGVCIANDATKVFRDHKVSVEALEDLSKLANQKLGGDPKSWSL 514
            GIPQ L++LLED T  K GV IA+DA+KVF+++ VSV+ L ++S LANQKL G PK W L
Sbjct: 189  GIPQSLQALLEDDTLSKAGVGIASDASKVFKEYNVSVKPLNEISDLANQKLAGVPKKWGL 248

Query: 513  GLLTEMLICKKLPKPSHIRVGNWEAAVLSEAQLQYAATDAFASWYIYEALKKLP 352
              LTEMLI K+L KP  IR+GNWE AVLS+ QLQYAATDAFASWY++E LK  P
Sbjct: 249  RALTEMLISKELQKPDRIRLGNWEVAVLSKDQLQYAATDAFASWYLHEILKGFP 302


>ref|XP_004133981.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
          Length = 314

 Score =  280 bits (717), Expect = 4e-73
 Identities = 154/294 (52%), Positives = 195/294 (66%), Gaps = 6/294 (2%)
 Frame = -3

Query: 1215 SDWDQPFTDQELQAIVA---AFQXXXXXXSI--KCPDTGNCAEQRPKTRRRLPDSLSGSQ 1051
            S++DQPFT+Q+LQAI A   A+Q            PD    +   P T RRLP S+   Q
Sbjct: 31   SEFDQPFTEQQLQAIEAIEAAYQSTSAKKRRPNSTPDGNEVSCVSPDTGRRLPRSIFSHQ 90

Query: 1050 QQHPFTGNSSSPFS-LAPCPRNWLNKICLSTHQAKSMMRYPQITFGGKIVYSRTVSEVEK 874
                     S  FS L+PC  N             S MR+P + +GG+I+YSRTVSEV++
Sbjct: 91   ---------SPRFSPLSPCRVN-------------SKMRFPALNYGGRIIYSRTVSEVDR 128

Query: 873  ASEELLKFVEAKKRGAGRTVLGFDIEWKPTFKRGVKPGKAAVMQICGDKSHCHVMHIIHT 694
            AS EL K + + ++   +  +GFDIEW+P+FKRGV PGKAAVMQ+C + S CHVMHIIH+
Sbjct: 129  ASRELAKKINSTRKAMDQITIGFDIEWRPSFKRGVPPGKAAVMQLCLENSECHVMHIIHS 188

Query: 693  GIPQKLRSLLEDPTSVKVGVCIANDATKVFRDHKVSVEALEDLSKLANQKLGGDPKSWSL 514
            GIPQ L++LLED T  K GV IA+DA+KVF+++ VSV+ L ++S LANQKL G PK W L
Sbjct: 189  GIPQSLQALLEDDTLSKAGVGIASDASKVFKEYNVSVKPLNEISDLANQKLAGVPKKWGL 248

Query: 513  GLLTEMLICKKLPKPSHIRVGNWEAAVLSEAQLQYAATDAFASWYIYEALKKLP 352
              LTE LI K+L KP  IR+GNWE AVLS+ QLQYAATDAFASWY++E LK  P
Sbjct: 249  RALTETLISKELQKPDRIRLGNWEVAVLSKDQLQYAATDAFASWYLHEILKGFP 302


Top