BLASTX nr result

ID: Panax21_contig00023521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023521
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234673.1| TIR1-like protein [Solanum lycopersicum] gi|...   151   5e-35
ref|XP_002520681.1| TRANSPORT INHIBITOR RESPONSE 1 protein, puta...   150   9e-35
ref|XP_002321035.1| f-box family protein [Populus trichocarpa] g...   149   2e-34
gb|ACX31301.2| transport inhibitor response 1 [Dimocarpus longan]     149   3e-34
gb|ACT53268.1| transport inhibitor response 1 [Nicotiana tabacum]     149   3e-34

>ref|NP_001234673.1| TIR1-like protein [Solanum lycopersicum]
           gi|256427109|gb|ACU81102.1| TIR1-like protein [Solanum
           lycopersicum]
          Length = 581

 Score =  151 bits (382), Expect = 5e-35
 Identities = 69/84 (82%), Positives = 77/84 (91%)
 Frame = -3

Query: 541 NAAKLETMRSLWLSSCSVSYGACKLLAQKLPRLNVEVIDERGPPDSSPESCPIEKLYIYR 362
           NAAKLETMRSLW+SSCSVS+ ACK+LAQK+PRLNVEVIDERGPPD+ PESCP+EKLYIYR
Sbjct: 497 NAAKLETMRSLWMSSCSVSFEACKMLAQKMPRLNVEVIDERGPPDTRPESCPVEKLYIYR 556

Query: 361 TVAGPRFDTPDFIWTMDEDAEAPL 290
           TVAG RFDTP ++WTMDEDA   L
Sbjct: 557 TVAGRRFDTPGYVWTMDEDAAVSL 580


>ref|XP_002520681.1| TRANSPORT INHIBITOR RESPONSE 1 protein, putative [Ricinus communis]
           gi|223540066|gb|EEF41643.1| TRANSPORT INHIBITOR RESPONSE
           1 protein, putative [Ricinus communis]
          Length = 585

 Score =  150 bits (380), Expect = 9e-35
 Identities = 68/80 (85%), Positives = 76/80 (95%)
 Frame = -3

Query: 541 NAAKLETMRSLWLSSCSVSYGACKLLAQKLPRLNVEVIDERGPPDSSPESCPIEKLYIYR 362
           NAAKLETMRSLW+SSCSVSYGACKLL QK+PRLNVEVIDERGPPD+ PESCP+EKLYIYR
Sbjct: 501 NAAKLETMRSLWMSSCSVSYGACKLLGQKMPRLNVEVIDERGPPDTRPESCPVEKLYIYR 560

Query: 361 TVAGPRFDTPDFIWTMDEDA 302
           +VAGPRFD P F++TMDED+
Sbjct: 561 SVAGPRFDMPGFVYTMDEDS 580


>ref|XP_002321035.1| f-box family protein [Populus trichocarpa]
           gi|222861808|gb|EEE99350.1| f-box family protein
           [Populus trichocarpa]
          Length = 584

 Score =  149 bits (377), Expect = 2e-34
 Identities = 67/80 (83%), Positives = 74/80 (92%)
 Frame = -3

Query: 541 NAAKLETMRSLWLSSCSVSYGACKLLAQKLPRLNVEVIDERGPPDSSPESCPIEKLYIYR 362
           NAAKLETMRSLW+SSCSVS+ ACKLL QK+PRLNVEVIDERGPPD  PESCP+EKLYIYR
Sbjct: 500 NAAKLETMRSLWMSSCSVSFRACKLLGQKMPRLNVEVIDERGPPDLRPESCPVEKLYIYR 559

Query: 361 TVAGPRFDTPDFIWTMDEDA 302
           T+AGPRFD P F+WTMDED+
Sbjct: 560 TIAGPRFDMPGFVWTMDEDS 579


>gb|ACX31301.2| transport inhibitor response 1 [Dimocarpus longan]
          Length = 586

 Score =  149 bits (376), Expect = 3e-34
 Identities = 68/80 (85%), Positives = 74/80 (92%)
 Frame = -3

Query: 541 NAAKLETMRSLWLSSCSVSYGACKLLAQKLPRLNVEVIDERGPPDSSPESCPIEKLYIYR 362
           NAAKLETMRSLW+SSCSVS+GACKLL QK+PRLNVEVIDERGPPDS PES P+EKLYIYR
Sbjct: 502 NAAKLETMRSLWMSSCSVSFGACKLLGQKMPRLNVEVIDERGPPDSRPESFPVEKLYIYR 561

Query: 361 TVAGPRFDTPDFIWTMDEDA 302
           TVAGPRFD P F+W MDED+
Sbjct: 562 TVAGPRFDMPGFVWNMDEDS 581


>gb|ACT53268.1| transport inhibitor response 1 [Nicotiana tabacum]
          Length = 581

 Score =  149 bits (375), Expect = 3e-34
 Identities = 68/84 (80%), Positives = 76/84 (90%)
 Frame = -3

Query: 541 NAAKLETMRSLWLSSCSVSYGACKLLAQKLPRLNVEVIDERGPPDSSPESCPIEKLYIYR 362
           NAAKLETMRSLW+SSCSVS+GACKLLAQK+PRLNVE IDERG PD+ PESCP+EKLYIYR
Sbjct: 497 NAAKLETMRSLWMSSCSVSFGACKLLAQKIPRLNVEAIDERGLPDTRPESCPVEKLYIYR 556

Query: 361 TVAGPRFDTPDFIWTMDEDAEAPL 290
           +VAGPRFD P F+WTMDE+A   L
Sbjct: 557 SVAGPRFDKPGFVWTMDEEAAVRL 580


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