BLASTX nr result

ID: Panax21_contig00023510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023510
         (768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169643.1| PREDICTED: LOW QUALITY PROTEIN: scarecrow-li...   365   6e-99
ref|XP_004147202.1| PREDICTED: scarecrow-like protein 27-like [C...   365   6e-99
emb|CBI31914.3| unnamed protein product [Vitis vinifera]              360   2e-97
ref|XP_002266783.1| PREDICTED: scarecrow-like protein 22-like [V...   360   2e-97
ref|XP_002329873.1| GRAS family transcription factor [Populus tr...   359   4e-97

>ref|XP_004169643.1| PREDICTED: LOW QUALITY PROTEIN: scarecrow-like protein 27-like
            [Cucumis sativus]
          Length = 774

 Score =  365 bits (937), Expect = 6e-99
 Identities = 177/255 (69%), Positives = 211/255 (82%)
 Frame = +3

Query: 3    SEVSPLIQFTNFTSNQALIEALGDADSIHIIDFDIGFGAQWSSFLQELPRKERGAPSLKI 182
            SE+SPLIQF NFT NQAL+EAL D D IHI+DFDIGFGAQW+SF+QEL  + RGAPSLKI
Sbjct: 493  SEISPLIQFVNFTCNQALLEALDDIDRIHIVDFDIGFGAQWASFMQELSLRNRGAPSLKI 552

Query: 183  TAFASPTTHHPIELGLMYENLTQFANETGVSFELEVVNFDSFDPNSYSMPPSQSSKNEAI 362
            TAFASP+THHPIELGLM ENLTQFAN+ G+SFE EVVNFDS + NS+S+P  +SS+NEA+
Sbjct: 553  TAFASPSTHHPIELGLMRENLTQFANDIGISFEFEVVNFDSLNQNSFSLPFPRSSENEAV 612

Query: 363  AVNLPIWSLSGYLPALTSLLRFIKNLSPKIIVSMDRGCERIELPSPQHLLHELQYYEVLL 542
            AVN P+W  S     L SLLRFIK LSPKI+VS+DRGC+R +LP PQH+L  LQ Y  LL
Sbjct: 613  AVNFPLWCSSNQPAMLPSLLRFIKQLSPKIVVSLDRGCDRSDLPFPQHMLQALQSYINLL 672

Query: 543  DSIEAANVTSETVNKIEKFLFQPRIESMVLGRLHFPQQMPPWKSLFASMGFSAVAFSNFA 722
            +S++A N+ S+ VNKIE+FL QPRIES VLGRL  P++MPPWK+LFAS GF+ V FSNF 
Sbjct: 673  ESLDAINMNSDAVNKIERFLLQPRIESTVLGRLRAPERMPPWKTLFASAGFTPVTFSNFT 732

Query: 723  ESQADCVAQRTQVRG 767
            E+QA+CVA+RT VRG
Sbjct: 733  ETQAECVAKRTSVRG 747


>ref|XP_004147202.1| PREDICTED: scarecrow-like protein 27-like [Cucumis sativus]
          Length = 774

 Score =  365 bits (937), Expect = 6e-99
 Identities = 177/255 (69%), Positives = 211/255 (82%)
 Frame = +3

Query: 3    SEVSPLIQFTNFTSNQALIEALGDADSIHIIDFDIGFGAQWSSFLQELPRKERGAPSLKI 182
            SE+SPLIQF NFT NQAL+EAL D D IHI+DFDIGFGAQW+SF+QEL  + RGAPSLKI
Sbjct: 493  SEISPLIQFVNFTCNQALLEALDDIDRIHIVDFDIGFGAQWASFMQELSLRNRGAPSLKI 552

Query: 183  TAFASPTTHHPIELGLMYENLTQFANETGVSFELEVVNFDSFDPNSYSMPPSQSSKNEAI 362
            TAFASP+THHPIELGLM ENLTQFAN+ G+SFE EVVNFDS + NS+S+P  +SS+NEA+
Sbjct: 553  TAFASPSTHHPIELGLMRENLTQFANDIGISFEFEVVNFDSLNQNSFSLPFPRSSENEAV 612

Query: 363  AVNLPIWSLSGYLPALTSLLRFIKNLSPKIIVSMDRGCERIELPSPQHLLHELQYYEVLL 542
            AVN P+W  S     L SLLRFIK LSPKI+VS+DRGC+R +LP PQH+L  LQ Y  LL
Sbjct: 613  AVNFPLWCSSNQPAMLPSLLRFIKQLSPKIVVSLDRGCDRSDLPFPQHMLQALQSYINLL 672

Query: 543  DSIEAANVTSETVNKIEKFLFQPRIESMVLGRLHFPQQMPPWKSLFASMGFSAVAFSNFA 722
            +S++A N+ S+ VNKIE+FL QPRIES VLGRL  P++MPPWK+LFAS GF+ V FSNF 
Sbjct: 673  ESLDAINMNSDAVNKIERFLLQPRIESTVLGRLRAPERMPPWKTLFASAGFTPVTFSNFT 732

Query: 723  ESQADCVAQRTQVRG 767
            E+QA+CVA+RT VRG
Sbjct: 733  ETQAECVAKRTSVRG 747


>emb|CBI31914.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  360 bits (923), Expect = 2e-97
 Identities = 179/256 (69%), Positives = 212/256 (82%), Gaps = 1/256 (0%)
 Frame = +3

Query: 3   SEVSPLIQFTNFTSNQALIEALGDADSIHIIDFDIGFGAQWSSFLQELPRKERGAPSLKI 182
           S+VSPLIQF NFT NQAL+EAL DAD IHIIDFDIGFGAQW+SF+QELP + RGAPSLKI
Sbjct: 230 SDVSPLIQFANFTCNQALLEALDDADRIHIIDFDIGFGAQWASFMQELPVRNRGAPSLKI 289

Query: 183 TAFASP-TTHHPIELGLMYENLTQFANETGVSFELEVVNFDSFDPNSYSMPPSQSSKNEA 359
           TA ASP TTHHP+EL L+ ENLT FA+E G++FEL+VVNFDSFDP SYSMP  ++S+NEA
Sbjct: 290 TALASPSTTHHPLELKLLRENLTLFADEIGIAFELQVVNFDSFDPVSYSMPYFRTSENEA 349

Query: 360 IAVNLPIWSLSGYLPALTSLLRFIKNLSPKIIVSMDRGCERIELPSPQHLLHELQYYEVL 539
           I VN PIWS S +  AL  LLRFIK LSPK++VS+DRGC+R +LP  QHLLH +Q Y  L
Sbjct: 350 IVVNFPIWSSSNHPAALPLLLRFIKQLSPKLMVSLDRGCDRGDLPLQQHLLHGIQSYTNL 409

Query: 540 LDSIEAANVTSETVNKIEKFLFQPRIESMVLGRLHFPQQMPPWKSLFASMGFSAVAFSNF 719
           L+S++A N  ++TV+KIE+FLFQPRIES  LGRL  P +MPPWK+LFAS GF+ V+FSNF
Sbjct: 410 LESLDATNAMTDTVSKIERFLFQPRIESTTLGRLRSPDKMPPWKTLFASAGFTPVSFSNF 469

Query: 720 AESQADCVAQRTQVRG 767
            ESQADCV +RT VRG
Sbjct: 470 TESQADCVVKRTLVRG 485


>ref|XP_002266783.1| PREDICTED: scarecrow-like protein 22-like [Vitis vinifera]
          Length = 814

 Score =  360 bits (923), Expect = 2e-97
 Identities = 179/256 (69%), Positives = 212/256 (82%), Gaps = 1/256 (0%)
 Frame = +3

Query: 3    SEVSPLIQFTNFTSNQALIEALGDADSIHIIDFDIGFGAQWSSFLQELPRKERGAPSLKI 182
            S+VSPLIQF NFT NQAL+EAL DAD IHIIDFDIGFGAQW+SF+QELP + RGAPSLKI
Sbjct: 532  SDVSPLIQFANFTCNQALLEALDDADRIHIIDFDIGFGAQWASFMQELPVRNRGAPSLKI 591

Query: 183  TAFASP-TTHHPIELGLMYENLTQFANETGVSFELEVVNFDSFDPNSYSMPPSQSSKNEA 359
            TA ASP TTHHP+EL L+ ENLT FA+E G++FEL+VVNFDSFDP SYSMP  ++S+NEA
Sbjct: 592  TALASPSTTHHPLELKLLRENLTLFADEIGIAFELQVVNFDSFDPVSYSMPYFRTSENEA 651

Query: 360  IAVNLPIWSLSGYLPALTSLLRFIKNLSPKIIVSMDRGCERIELPSPQHLLHELQYYEVL 539
            I VN PIWS S +  AL  LLRFIK LSPK++VS+DRGC+R +LP  QHLLH +Q Y  L
Sbjct: 652  IVVNFPIWSSSNHPAALPLLLRFIKQLSPKLMVSLDRGCDRGDLPLQQHLLHGIQSYTNL 711

Query: 540  LDSIEAANVTSETVNKIEKFLFQPRIESMVLGRLHFPQQMPPWKSLFASMGFSAVAFSNF 719
            L+S++A N  ++TV+KIE+FLFQPRIES  LGRL  P +MPPWK+LFAS GF+ V+FSNF
Sbjct: 712  LESLDATNAMTDTVSKIERFLFQPRIESTTLGRLRSPDKMPPWKTLFASAGFTPVSFSNF 771

Query: 720  AESQADCVAQRTQVRG 767
             ESQADCV +RT VRG
Sbjct: 772  TESQADCVVKRTLVRG 787


>ref|XP_002329873.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222871110|gb|EEF08241.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 777

 Score =  359 bits (921), Expect = 4e-97
 Identities = 174/255 (68%), Positives = 211/255 (82%)
 Frame = +3

Query: 3    SEVSPLIQFTNFTSNQALIEALGDADSIHIIDFDIGFGAQWSSFLQELPRKERGAPSLKI 182
            SEVSPLIQF NFT NQAL+EA+ DADSIHI+DFDIGFGAQW+SF+QELPR  RG  SLK 
Sbjct: 497  SEVSPLIQFVNFTCNQALLEAVDDADSIHIVDFDIGFGAQWASFMQELPRN-RGVRSLKT 555

Query: 183  TAFASPTTHHPIELGLMYENLTQFANETGVSFELEVVNFDSFDPNSYSMPPSQSSKNEAI 362
            TAFASP+THHP+ELGLM +NLTQFANE G+SFEL+V+NFDS + N YS+P  ++++NEA+
Sbjct: 556  TAFASPSTHHPVELGLMRDNLTQFANEIGLSFELDVINFDSLEQNCYSLPFFRTNENEAV 615

Query: 363  AVNLPIWSLSGYLPALTSLLRFIKNLSPKIIVSMDRGCERIELPSPQHLLHELQYYEVLL 542
             VN PIW  S    AL SLLRFIK LSPKI+VS+DRGC+R +LP PQH+LH LQ Y  LL
Sbjct: 616  VVNFPIWCSSNQPSALPSLLRFIKQLSPKIVVSLDRGCDRSDLPFPQHILHALQSYVHLL 675

Query: 543  DSIEAANVTSETVNKIEKFLFQPRIESMVLGRLHFPQQMPPWKSLFASMGFSAVAFSNFA 722
            +S++A N T++ VNKIE+FL QPRIES VLGRL  P++MP WK++FAS+GFS V FSNF 
Sbjct: 676  ESLDAVNATTDAVNKIERFLLQPRIESTVLGRLRAPEKMPNWKTIFASVGFSPVTFSNFT 735

Query: 723  ESQADCVAQRTQVRG 767
            E+QA+CV +RT VRG
Sbjct: 736  ETQAECVVKRTPVRG 750


Top