BLASTX nr result

ID: Panax21_contig00023498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023498
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303864.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|XP_002297677.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
gb|AAR14272.1| predicted protein [Populus tremula x Populus alba]      79   3e-13
ref|XP_002512752.1| conserved hypothetical protein [Ricinus comm...    75   4e-12
ref|XP_002272318.1| PREDICTED: uncharacterized protein LOC100246...    75   7e-12

>ref|XP_002303864.1| predicted protein [Populus trichocarpa] gi|222841296|gb|EEE78843.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 46/81 (56%), Positives = 59/81 (72%), Gaps = 6/81 (7%)
 Frame = -2

Query: 232 KKLEANLNAGFSPVSSTPVFWKSRKRSASAKNVDQVIDDVDKKTP-KQEEAE-----QES 71
           K +EA    GFSPVSST VFWKSRKRSAS +N+D+V ++   +TP KQEE+      ++ 
Sbjct: 13  KMVEAEPLNGFSPVSSTRVFWKSRKRSASGRNLDKVTENTVNETPNKQEESSTDEKMEDP 72

Query: 70  TPVTVLSEKRKALFEPLEPVS 8
            P + LSE+RKALFEPLEPV+
Sbjct: 73  NPASELSERRKALFEPLEPVT 93


>ref|XP_002297677.1| predicted protein [Populus trichocarpa] gi|222844935|gb|EEE82482.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/72 (59%), Positives = 53/72 (73%), Gaps = 6/72 (8%)
 Frame = -2

Query: 205 GFSPVSSTPVFWKSRKRSASAKNVDQVIDDVDKKTP-KQEEAE-----QESTPVTVLSEK 44
           GFSPVSST +FWKSRKRSAS +N+D+V +D   +TP KQEE+      Q+      LSE+
Sbjct: 23  GFSPVSSTRIFWKSRKRSASGRNLDKVTEDNVNETPNKQEESSNDEKMQDQNLTPELSER 82

Query: 43  RKALFEPLEPVS 8
           RKALFEPLEPV+
Sbjct: 83  RKALFEPLEPVT 94


>gb|AAR14272.1| predicted protein [Populus tremula x Populus alba]
          Length = 221

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/72 (59%), Positives = 53/72 (73%), Gaps = 6/72 (8%)
 Frame = -2

Query: 205 GFSPVSSTPVFWKSRKRSASAKNVDQVIDDVDKKTP-KQEEAE-----QESTPVTVLSEK 44
           GFSPVSST +FWKSRKRSAS +N+D+V +D   +TP KQEE+      Q+      LSE+
Sbjct: 23  GFSPVSSTRIFWKSRKRSASGRNLDKVTEDNVNETPNKQEESSNDEKMQDQNLTRELSER 82

Query: 43  RKALFEPLEPVS 8
           RKALFEPLEPV+
Sbjct: 83  RKALFEPLEPVT 94


>ref|XP_002512752.1| conserved hypothetical protein [Ricinus communis]
           gi|223547763|gb|EEF49255.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 230

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 47/83 (56%), Positives = 59/83 (71%), Gaps = 8/83 (9%)
 Frame = -2

Query: 232 KKLEANLNAGFSPVSSTP-VFWKSRKRSASAKNVDQVIDDVDKKTP--KQEEA-----EQ 77
           KK++  L  GFS +SSTP + WKSR+RSASA+N D+V +D   +TP  KQEE+      +
Sbjct: 22  KKVDDGLLNGFS-ISSTPNISWKSRRRSASARNSDKVTNDTANETPPDKQEESYNDEKME 80

Query: 76  ESTPVTVLSEKRKALFEPLEPVS 8
           E   V VLSEKRKALFEPLEPV+
Sbjct: 81  ELNAVPVLSEKRKALFEPLEPVN 103


>ref|XP_002272318.1| PREDICTED: uncharacterized protein LOC100246715 [Vitis vinifera]
           gi|147792903|emb|CAN68795.1| hypothetical protein
           VITISV_016175 [Vitis vinifera]
           gi|298204768|emb|CBI25266.3| unnamed protein product
           [Vitis vinifera]
          Length = 201

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/79 (54%), Positives = 58/79 (73%), Gaps = 4/79 (5%)
 Frame = -2

Query: 232 KKLEANLNAGFSPVSS-TPVFWKSRKRSASAKNVDQVIDDVDKKTP-KQEEAEQEST--P 65
           KK + NL+ GFS VSS T VFW SR+RS S +N+++V +D    TP KQ+E+  E T   
Sbjct: 5   KKPDGNLD-GFSTVSSSTRVFWNSRRRSGSGRNLEKVAEDTSDNTPKKQDESPPEETMQD 63

Query: 64  VTVLSEKRKALFEPLEPVS 8
           ++VLSE+RKALFEPLEP++
Sbjct: 64  ISVLSERRKALFEPLEPLT 82


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