BLASTX nr result

ID: Panax21_contig00023495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023495
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241039.1| uncharacterized protein LOC100805013 [Glycin...   184   7e-45
ref|XP_004158107.1| PREDICTED: probable rRNA-processing protein ...   176   2e-42
ref|XP_004143659.1| PREDICTED: probable rRNA-processing protein ...   176   2e-42
ref|XP_002526440.1| rRNA-processing protein EBP2, putative [Rici...   174   7e-42
ref|XP_003556506.1| PREDICTED: probable rRNA-processing protein ...   173   2e-41

>ref|NP_001241039.1| uncharacterized protein LOC100805013 [Glycine max]
           gi|255634741|gb|ACU17732.1| unknown [Glycine max]
          Length = 287

 Score =  184 bits (467), Expect = 7e-45
 Identities = 87/102 (85%), Positives = 93/102 (91%)
 Frame = +2

Query: 161 DGDVKLTEPSKNAIYNRDGLLDKFGDISWPENVEWIQKLSIDISQEQEVDVNDDLTRELA 340
           D DVKLTEPSKNA+YNRD LLDK GDISWPENVEWI KLS+D+ QEQEVDVNDDL RELA
Sbjct: 30  DEDVKLTEPSKNAVYNRDALLDKLGDISWPENVEWIHKLSVDVDQEQEVDVNDDLARELA 89

Query: 341 FYTQALEGTREAFVKFESMKLPFLRPSDYYAEMVKTDTHMVK 466
           FYTQALEGT+EAF KF+SM LPFLRP+DYYAEMVKTD HMVK
Sbjct: 90  FYTQALEGTKEAFEKFQSMGLPFLRPADYYAEMVKTDGHMVK 131


>ref|XP_004158107.1| PREDICTED: probable rRNA-processing protein EBP2 homolog [Cucumis
           sativus]
          Length = 311

 Score =  176 bits (446), Expect = 2e-42
 Identities = 89/144 (61%), Positives = 104/144 (72%), Gaps = 4/144 (2%)
 Frame = +2

Query: 47  MAVIQKGPTVFDEETANNADMG----DLNTXXXXXXXXXXXDDGDVKLTEPSKNAIYNRD 214
           M V  K  +  +E+T  + D      +  +           ++ DV+L+EPSKNAIYN D
Sbjct: 1   MGVSIKDASFLNEDTVEDGDFSSEDSEFESESESGSGSEEEEEEDVELSEPSKNAIYNAD 60

Query: 215 GLLDKFGDISWPENVEWIQKLSIDISQEQEVDVNDDLTRELAFYTQALEGTREAFVKFES 394
           GLLDK GDISWPENVEWI KL+ DI QE+EVDVNDDLTRELAFYTQAL+GTR A  KF+S
Sbjct: 61  GLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQALQGTRMALEKFQS 120

Query: 395 MKLPFLRPSDYYAEMVKTDTHMVK 466
           + LPFLRPSDYYAEMVKTDTHM K
Sbjct: 121 LGLPFLRPSDYYAEMVKTDTHMQK 144


>ref|XP_004143659.1| PREDICTED: probable rRNA-processing protein EBP2 homolog [Cucumis
           sativus]
          Length = 312

 Score =  176 bits (446), Expect = 2e-42
 Identities = 89/144 (61%), Positives = 104/144 (72%), Gaps = 4/144 (2%)
 Frame = +2

Query: 47  MAVIQKGPTVFDEETANNADMG----DLNTXXXXXXXXXXXDDGDVKLTEPSKNAIYNRD 214
           M V  K  +  +E+T  + D      +  +           ++ DV+L+EPSKNAIYN D
Sbjct: 1   MGVSIKDASFLNEDTVEDGDFSSEDSEFESESESGSGSEEEEEEDVELSEPSKNAIYNAD 60

Query: 215 GLLDKFGDISWPENVEWIQKLSIDISQEQEVDVNDDLTRELAFYTQALEGTREAFVKFES 394
           GLLDK GDISWPENVEWI KL+ DI QE+EVDVNDDLTRELAFYTQAL+GTR A  KF+S
Sbjct: 61  GLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQALQGTRMALEKFQS 120

Query: 395 MKLPFLRPSDYYAEMVKTDTHMVK 466
           + LPFLRPSDYYAEMVKTDTHM K
Sbjct: 121 LGLPFLRPSDYYAEMVKTDTHMQK 144


>ref|XP_002526440.1| rRNA-processing protein EBP2, putative [Ricinus communis]
           gi|223534220|gb|EEF35935.1| rRNA-processing protein
           EBP2, putative [Ricinus communis]
          Length = 307

 Score =  174 bits (441), Expect = 7e-42
 Identities = 89/144 (61%), Positives = 103/144 (71%), Gaps = 4/144 (2%)
 Frame = +2

Query: 47  MAVIQKGPTVFDEETANNADM----GDLNTXXXXXXXXXXXDDGDVKLTEPSKNAIYNRD 214
           M    K  T +DEE  ++ ++    GD +            ++ DVKL+EPSKNA+YNRD
Sbjct: 1   MGARDKDLTAYDEEPIDDEEIDNIDGDESDSEYESEPESESEEEDVKLSEPSKNAVYNRD 60

Query: 215 GLLDKFGDISWPENVEWIQKLSIDISQEQEVDVNDDLTRELAFYTQALEGTREAFVKFES 394
            L DK  DISWPENV WI KLS+DI QEQEVDVNDDL RELAFYTQALEGTR+AF K E+
Sbjct: 61  ALNDKLQDISWPENVSWIHKLSVDIEQEQEVDVNDDLARELAFYTQALEGTRKAFEKLET 120

Query: 395 MKLPFLRPSDYYAEMVKTDTHMVK 466
           M LPFLRPSDYYAEMVK+D HM K
Sbjct: 121 MGLPFLRPSDYYAEMVKSDIHMEK 144


>ref|XP_003556506.1| PREDICTED: probable rRNA-processing protein EBP2 homolog [Glycine
           max]
          Length = 287

 Score =  173 bits (438), Expect = 2e-41
 Identities = 82/100 (82%), Positives = 88/100 (88%)
 Frame = +2

Query: 167 DVKLTEPSKNAIYNRDGLLDKFGDISWPENVEWIQKLSIDISQEQEVDVNDDLTRELAFY 346
           DV+L EPSKNA+YNRD LLDK GDISWP NVEWI KLSID+ QEQEVDVNDDL RELAFY
Sbjct: 32  DVRLAEPSKNAVYNRDALLDKLGDISWPANVEWIHKLSIDVDQEQEVDVNDDLARELAFY 91

Query: 347 TQALEGTREAFVKFESMKLPFLRPSDYYAEMVKTDTHMVK 466
           TQALEGT+EAF K +SM LPFLRP+DYYAEMVKTD HM K
Sbjct: 92  TQALEGTKEAFEKLQSMGLPFLRPADYYAEMVKTDGHMEK 131


Top