BLASTX nr result

ID: Panax21_contig00023471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023471
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311552.1| ZIP transporter [Populus trichocarpa] gi|222...    87   1e-15
ref|XP_002521911.1| iaa-alanine resistance protein, putative [Ri...    84   9e-15
ref|XP_002285173.1| PREDICTED: IAA-alanine resistance protein 1 ...    80   2e-13
gb|ACU22819.1| unknown [Glycine max]                                   78   6e-13
ref|XP_003531130.1| PREDICTED: IAA-alanine resistance protein 1-...    77   2e-12

>ref|XP_002311552.1| ZIP transporter [Populus trichocarpa] gi|222851372|gb|EEE88919.1|
           ZIP transporter [Populus trichocarpa]
          Length = 400

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 54/109 (49%), Positives = 60/109 (55%)
 Frame = -2

Query: 338 GFTWALLWGQDPGQSSLVEVRFVQGIINTHVCVHRQXXXXXXXXXXXXXTVP*LQGFTAG 159
           G   ALLWGQDPGQSSL+E                                    GFTAG
Sbjct: 332 GTALALLWGQDPGQSSLIE------------------------------------GFTAG 355

Query: 158 GFIYIAVAGVLAEMNNGSPALKSTAIQITSLILGMFVCCPLALCISLVE 12
           GF+YIAVAGVLAEMNN    L+S+A+ ITSL+LGM V    ALCISLVE
Sbjct: 356 GFVYIAVAGVLAEMNNSKTTLRSSAVHITSLVLGMAV----ALCISLVE 400


>ref|XP_002521911.1| iaa-alanine resistance protein, putative [Ricinus communis]
           gi|223538949|gb|EEF40547.1| iaa-alanine resistance
           protein, putative [Ricinus communis]
          Length = 484

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 52/109 (47%), Positives = 59/109 (54%)
 Frame = -2

Query: 338 GFTWALLWGQDPGQSSLVEVRFVQGIINTHVCVHRQXXXXXXXXXXXXXTVP*LQGFTAG 159
           G   ALLWGQDPGQSSL+E                                    GFTAG
Sbjct: 416 GTALALLWGQDPGQSSLIE------------------------------------GFTAG 439

Query: 158 GFIYIAVAGVLAEMNNGSPALKSTAIQITSLILGMFVCCPLALCISLVE 12
           GFIYI+VAGVLAEMNN S   +S+A+ ITS++LGM V    ALCISL E
Sbjct: 440 GFIYISVAGVLAEMNNSSSTFRSSAVHITSMVLGMAV----ALCISLAE 484


>ref|XP_002285173.1| PREDICTED: IAA-alanine resistance protein 1 [Vitis vinifera]
           gi|297737576|emb|CBI26777.3| unnamed protein product
           [Vitis vinifera]
          Length = 483

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 55/109 (50%), Positives = 58/109 (53%)
 Frame = -2

Query: 338 GFTWALLWGQDPGQSSLVEVRFVQGIINTHVCVHRQXXXXXXXXXXXXXTVP*LQGFTAG 159
           G   ALL GQDPGQSSL+E                                    GFTAG
Sbjct: 415 GTALALLLGQDPGQSSLIE------------------------------------GFTAG 438

Query: 158 GFIYIAVAGVLAEMNNGSPALKSTAIQITSLILGMFVCCPLALCISLVE 12
           GFIYIAVAGVL EMNNG+  LK T IQ+TSLILGM V    AL ISLVE
Sbjct: 439 GFIYIAVAGVLPEMNNGNSTLKGTFIQLTSLILGMAV----ALGISLVE 483


>gb|ACU22819.1| unknown [Glycine max]
          Length = 402

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 53/110 (48%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
 Frame = -2

Query: 338 GFTWALLWGQDPGQSSLVEVRFVQGIINTHVCVHRQXXXXXXXXXXXXXTVP*LQGFTAG 159
           G   ALLWG+DPGQSSL+E                                    GFTAG
Sbjct: 333 GTALALLWGKDPGQSSLIE------------------------------------GFTAG 356

Query: 158 GFIYIAVAGVLAEMNN-GSPALKSTAIQITSLILGMFVCCPLALCISLVE 12
           GFIYIA+AGVLAEMNN G+ AL+ST +QI SL +GM V    AL ISLVE
Sbjct: 357 GFIYIAIAGVLAEMNNGGNTALRSTVVQIISLTIGMAV----ALGISLVE 402


>ref|XP_003531130.1| PREDICTED: IAA-alanine resistance protein 1-like [Glycine max]
          Length = 485

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 52/110 (47%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
 Frame = -2

Query: 338 GFTWALLWGQDPGQSSLVEVRFVQGIINTHVCVHRQXXXXXXXXXXXXXTVP*LQGFTAG 159
           G   ALLWG+DPGQSSL+E                                    GFTAG
Sbjct: 416 GTALALLWGKDPGQSSLIE------------------------------------GFTAG 439

Query: 158 GFIYIAVAGVLAEMNN-GSPALKSTAIQITSLILGMFVCCPLALCISLVE 12
           GFIYIA+AGVLAEMNN G+  L+ST +QI SL +GM V    AL ISLVE
Sbjct: 440 GFIYIAIAGVLAEMNNGGNTTLRSTVVQIISLTIGMAV----ALGISLVE 485


Top