BLASTX nr result

ID: Panax21_contig00023460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023460
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269610.2| PREDICTED: cellulose synthase A catalytic su...    95   8e-18
emb|CBI30713.3| unnamed protein product [Vitis vinifera]               95   8e-18
ref|XP_002316814.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_002522238.1| wd40 protein, putative [Ricinus communis] gi...    92   5e-17
ref|XP_004161207.1| PREDICTED: LOW QUALITY PROTEIN: cellulose sy...    91   2e-16

>ref|XP_002269610.2| PREDICTED: cellulose synthase A catalytic subunit 8 [UDP-forming]
           [Vitis vinifera]
          Length = 1360

 Score = 94.7 bits (234), Expect = 8e-18
 Identities = 39/55 (70%), Positives = 49/55 (89%)
 Frame = -2

Query: 507 GGNDKSVKAWNWSTYFDGGQTSSNSDLLHLNINLTRKVNWLCTTPSDSENLIICD 343
           GGNDK+VK W+ S Y D GQ SS++D+LHLNINL++KVNWLCTTP+DSENL++CD
Sbjct: 310 GGNDKTVKVWDCSRYLDAGQPSSSNDVLHLNINLSKKVNWLCTTPADSENLVVCD 364


>emb|CBI30713.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score = 94.7 bits (234), Expect = 8e-18
 Identities = 39/55 (70%), Positives = 49/55 (89%)
 Frame = -2

Query: 507 GGNDKSVKAWNWSTYFDGGQTSSNSDLLHLNINLTRKVNWLCTTPSDSENLIICD 343
           GGNDK+VK W+ S Y D GQ SS++D+LHLNINL++KVNWLCTTP+DSENL++CD
Sbjct: 290 GGNDKTVKVWDCSRYLDAGQPSSSNDVLHLNINLSKKVNWLCTTPADSENLVVCD 344


>ref|XP_002316814.1| predicted protein [Populus trichocarpa] gi|222859879|gb|EEE97426.1|
           predicted protein [Populus trichocarpa]
          Length = 343

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 41/62 (66%), Positives = 49/62 (79%)
 Frame = -2

Query: 528 KGGI*YQGGNDKSVKAWNWSTYFDGGQTSSNSDLLHLNINLTRKVNWLCTTPSDSENLII 349
           KG +   GGNDKSVK W+ S Y D  QT  NSD+L LNINL++KVNWLCTTP+DSENL++
Sbjct: 271 KGKLIISGGNDKSVKVWDCSKYDDAVQTGGNSDVLRLNINLSKKVNWLCTTPTDSENLVV 330

Query: 348 CD 343
           CD
Sbjct: 331 CD 332


>ref|XP_002522238.1| wd40 protein, putative [Ricinus communis]
           gi|223538491|gb|EEF40096.1| wd40 protein, putative
           [Ricinus communis]
          Length = 1458

 Score = 92.0 bits (227), Expect = 5e-17
 Identities = 39/62 (62%), Positives = 51/62 (82%)
 Frame = -2

Query: 528 KGGI*YQGGNDKSVKAWNWSTYFDGGQTSSNSDLLHLNINLTRKVNWLCTTPSDSENLII 349
           +G     GGNDKSVK W+ S Y D G ++SN+D+LHLNIN+++KVNWLCTTPS+SENL++
Sbjct: 295 RGKFIISGGNDKSVKVWDCSRYPDVGPSNSNNDILHLNINMSKKVNWLCTTPSESENLVV 354

Query: 348 CD 343
           CD
Sbjct: 355 CD 356


>ref|XP_004161207.1| PREDICTED: LOW QUALITY PROTEIN: cellulose synthase A catalytic
           subunit 8 [UDP-forming]-like [Cucumis sativus]
          Length = 1390

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 40/63 (63%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
 Frame = -2

Query: 528 KGGI*YQGGNDKSVKAWNWSTYFDGGQTSS-NSDLLHLNINLTRKVNWLCTTPSDSENLI 352
           KG     GGNDK +K WNW    D G+TSS N+++LHLNINL++KVNWLCTTPS++ENLI
Sbjct: 300 KGKFIVSGGNDKCIKLWNWCEVPDAGKTSSSNNEVLHLNINLSKKVNWLCTTPSETENLI 359

Query: 351 ICD 343
           +CD
Sbjct: 360 VCD 362


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