BLASTX nr result

ID: Panax21_contig00023443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023443
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17520.3| unnamed protein product [Vitis vinifera]              201   4e-50
ref|XP_002267514.1| PREDICTED: vam6/Vps39-like protein [Vitis vi...   201   4e-50
ref|XP_002327802.1| predicted protein [Populus trichocarpa] gi|2...   196   1e-48
ref|XP_002310230.1| predicted protein [Populus trichocarpa] gi|2...   191   4e-47
ref|XP_002521595.1| conserved hypothetical protein [Ricinus comm...   189   3e-46

>emb|CBI17520.3| unnamed protein product [Vitis vinifera]
          Length = 924

 Score =  201 bits (512), Expect = 4e-50
 Identities = 106/147 (72%), Positives = 117/147 (79%)
 Frame = -3

Query: 442  TYSNIYLTLLQIYLNPRRTTKNFEKRITNLVSSQTTSIPKVSSWTTVKTKGGRLAKKIAE 263
            T  NIYLTLLQIYLNPRRTTKNFEKRIT+LVSSQ TSIPKVSS T+VK KGGRL KKIAE
Sbjct: 700  TSGNIYLTLLQIYLNPRRTTKNFEKRITSLVSSQNTSIPKVSSGTSVKAKGGRLGKKIAE 759

Query: 262  IEGAEDTRISPXXXXXXXXXXXXXXXXXXXXXTIMLDEVLDVLSQRWDRVNGAQALKLLP 83
            IEGAED R+S                      +IMLDEVLD+LS+RWDR++GAQALKLLP
Sbjct: 760  IEGAEDMRVSLSSTDSGRSDGDADEPSEEGGSSIMLDEVLDLLSRRWDRIHGAQALKLLP 819

Query: 82   RDTKLQNLLPFLGPLMKKSSEAYRNFS 2
            R+TKLQNLLPFLGPL++KSSEAYRN S
Sbjct: 820  RETKLQNLLPFLGPLLRKSSEAYRNLS 846


>ref|XP_002267514.1| PREDICTED: vam6/Vps39-like protein [Vitis vinifera]
          Length = 1006

 Score =  201 bits (512), Expect = 4e-50
 Identities = 106/147 (72%), Positives = 117/147 (79%)
 Frame = -3

Query: 442  TYSNIYLTLLQIYLNPRRTTKNFEKRITNLVSSQTTSIPKVSSWTTVKTKGGRLAKKIAE 263
            T  NIYLTLLQIYLNPRRTTKNFEKRIT+LVSSQ TSIPKVSS T+VK KGGRL KKIAE
Sbjct: 782  TSGNIYLTLLQIYLNPRRTTKNFEKRITSLVSSQNTSIPKVSSGTSVKAKGGRLGKKIAE 841

Query: 262  IEGAEDTRISPXXXXXXXXXXXXXXXXXXXXXTIMLDEVLDVLSQRWDRVNGAQALKLLP 83
            IEGAED R+S                      +IMLDEVLD+LS+RWDR++GAQALKLLP
Sbjct: 842  IEGAEDMRVSLSSTDSGRSDGDADEPSEEGGSSIMLDEVLDLLSRRWDRIHGAQALKLLP 901

Query: 82   RDTKLQNLLPFLGPLMKKSSEAYRNFS 2
            R+TKLQNLLPFLGPL++KSSEAYRN S
Sbjct: 902  RETKLQNLLPFLGPLLRKSSEAYRNLS 928


>ref|XP_002327802.1| predicted protein [Populus trichocarpa] gi|222836887|gb|EEE75280.1|
            predicted protein [Populus trichocarpa]
          Length = 1008

 Score =  196 bits (499), Expect = 1e-48
 Identities = 103/144 (71%), Positives = 112/144 (77%)
 Frame = -3

Query: 433  NIYLTLLQIYLNPRRTTKNFEKRITNLVSSQTTSIPKVSSWTTVKTKGGRLAKKIAEIEG 254
            NIYLTLLQIYLNPR+TT NFEKRITNLVS Q T++PKVSS T VK KGGR  KKIA IEG
Sbjct: 787  NIYLTLLQIYLNPRKTTMNFEKRITNLVSFQNTNVPKVSSVTPVKAKGGRATKKIAAIEG 846

Query: 253  AEDTRISPXXXXXXXXXXXXXXXXXXXXXTIMLDEVLDVLSQRWDRVNGAQALKLLPRDT 74
            AED R+SP                     TIMLDEVLD+LS+RWDR+NGAQALKLLPR+T
Sbjct: 847  AEDLRVSPSGTDSSRSDGDADEFGDEGGSTIMLDEVLDLLSKRWDRINGAQALKLLPRET 906

Query: 73   KLQNLLPFLGPLMKKSSEAYRNFS 2
            KLQNLLPFLGPL+KKSSEAYRN S
Sbjct: 907  KLQNLLPFLGPLLKKSSEAYRNLS 930


>ref|XP_002310230.1| predicted protein [Populus trichocarpa] gi|222853133|gb|EEE90680.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  191 bits (486), Expect = 4e-47
 Identities = 100/145 (68%), Positives = 112/145 (77%)
 Frame = -3

Query: 436 SNIYLTLLQIYLNPRRTTKNFEKRITNLVSSQTTSIPKVSSWTTVKTKGGRLAKKIAEIE 257
           SN+YLTLLQIYLNP +TTKNFE+RITNLVS Q T+IPK+SS T VK KGGR  KKIA IE
Sbjct: 220 SNMYLTLLQIYLNPHKTTKNFEERITNLVSPQNTNIPKISSGTLVKAKGGRATKKIAAIE 279

Query: 256 GAEDTRISPXXXXXXXXXXXXXXXXXXXXXTIMLDEVLDVLSQRWDRVNGAQALKLLPRD 77
           GAED R+S                      TIMLDEVLD+LS+RWDR+NGAQALKLLP++
Sbjct: 280 GAEDIRVSLSGTDSSRSDGDADEFGEEGGSTIMLDEVLDLLSKRWDRINGAQALKLLPKE 339

Query: 76  TKLQNLLPFLGPLMKKSSEAYRNFS 2
           TKLQNLLPFLGPL+KKSSEAYRN S
Sbjct: 340 TKLQNLLPFLGPLLKKSSEAYRNLS 364


>ref|XP_002521595.1| conserved hypothetical protein [Ricinus communis]
            gi|223539273|gb|EEF40866.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 972

 Score =  189 bits (479), Expect = 3e-46
 Identities = 99/145 (68%), Positives = 112/145 (77%)
 Frame = -3

Query: 436  SNIYLTLLQIYLNPRRTTKNFEKRITNLVSSQTTSIPKVSSWTTVKTKGGRLAKKIAEIE 257
            +NIYLTLLQIYLNP++T KNFEKRI N+VSSQ  SIPKVSS  +VK+KGGR AKKIA IE
Sbjct: 750  ANIYLTLLQIYLNPQKTIKNFEKRIINIVSSQNISIPKVSSGASVKSKGGRGAKKIAAIE 809

Query: 256  GAEDTRISPXXXXXXXXXXXXXXXXXXXXXTIMLDEVLDVLSQRWDRVNGAQALKLLPRD 77
            GAED R+S                       IMLDEVLD+LS+RWDR+NGAQALKLLP++
Sbjct: 810  GAEDMRVSLGSTDSGRSDGDADEFSEEGGSMIMLDEVLDLLSRRWDRINGAQALKLLPKE 869

Query: 76   TKLQNLLPFLGPLMKKSSEAYRNFS 2
            TKLQNLLPFLGPLM+KSSEAYRN S
Sbjct: 870  TKLQNLLPFLGPLMRKSSEAYRNLS 894


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