BLASTX nr result

ID: Panax21_contig00023431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023431
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331484.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
dbj|BAG49074.1| 30S ribosomal protein S16 [Populus alba]              111   7e-23
ref|XP_004172096.1| PREDICTED: 30S ribosomal protein S16-like [C...   105   5e-21
ref|XP_002863022.1| ribosomal protein S16 family protein [Arabid...   104   7e-21
ref|XP_002281553.1| PREDICTED: 30S ribosomal protein S16 [Vitis ...   104   7e-21

>ref|XP_002331484.1| predicted protein [Populus trichocarpa] gi|222873562|gb|EEF10693.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score =  112 bits (280), Expect = 3e-23
 Identities = 51/66 (77%), Positives = 57/66 (86%)
 Frame = -2

Query: 492 YWLSVGAQPSDPVQRLLFRAGVLPPPPMLAMGRKGGPRDTRPIDPMTARYLPSEKPTNSD 313
           YWLSVGAQPS+PVQR+LFRAGVLPPPPM+ MGRKGGPRDTRP+DPMT R+L  EK  +S 
Sbjct: 61  YWLSVGAQPSEPVQRILFRAGVLPPPPMMVMGRKGGPRDTRPVDPMTGRFLSPEKSPSSS 120

Query: 312 QSVESK 295
           QS  SK
Sbjct: 121 QSNASK 126


>dbj|BAG49074.1| 30S ribosomal protein S16 [Populus alba]
          Length = 136

 Score =  111 bits (277), Expect = 7e-23
 Identities = 50/66 (75%), Positives = 57/66 (86%)
 Frame = -2

Query: 492 YWLSVGAQPSDPVQRLLFRAGVLPPPPMLAMGRKGGPRDTRPIDPMTARYLPSEKPTNSD 313
           YWLSVGAQPS+PVQR+LFRAG+LPPPPM+ MGRKGGPRDTRP+DPMT R+L  EK  +S 
Sbjct: 61  YWLSVGAQPSEPVQRILFRAGLLPPPPMMVMGRKGGPRDTRPVDPMTGRFLSPEKSPSSS 120

Query: 312 QSVESK 295
           QS  SK
Sbjct: 121 QSNASK 126


>ref|XP_004172096.1| PREDICTED: 30S ribosomal protein S16-like [Cucumis sativus]
          Length = 127

 Score =  105 bits (261), Expect = 5e-21
 Identities = 45/59 (76%), Positives = 57/59 (96%), Gaps = 1/59 (1%)
 Frame = -2

Query: 492 YWLSVGAQPSDPVQRLLFRAGVLPPPPMLAMGRKGGPRDTRPIDPMTARYL-PSEKPTN 319
           YWLSVGAQPSDPVQR+LFR+G+LPPPPM+AMGRKGGPRDTRP+DP++ R++ P++KPT+
Sbjct: 61  YWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDTRPVDPLSGRFVTPAKKPTD 119


>ref|XP_002863022.1| ribosomal protein S16 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297793207|ref|XP_002864488.1| ribosomal
           protein S16 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297308822|gb|EFH39281.1| ribosomal protein
           S16 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310323|gb|EFH40747.1| ribosomal protein S16 family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 135

 Score =  104 bits (260), Expect = 7e-21
 Identities = 46/57 (80%), Positives = 52/57 (91%)
 Frame = -2

Query: 492 YWLSVGAQPSDPVQRLLFRAGVLPPPPMLAMGRKGGPRDTRPIDPMTARYLPSEKPT 322
           YWLSVGAQPSDPVQRLLFR+G+LPPPPM+AMGRKGG RDTRP+DPMT RY+ +E  T
Sbjct: 61  YWLSVGAQPSDPVQRLLFRSGLLPPPPMVAMGRKGGARDTRPVDPMTGRYVDAENKT 117


>ref|XP_002281553.1| PREDICTED: 30S ribosomal protein S16 [Vitis vinifera]
           gi|297738652|emb|CBI27897.3| unnamed protein product
           [Vitis vinifera]
          Length = 136

 Score =  104 bits (260), Expect = 7e-21
 Identities = 46/61 (75%), Positives = 54/61 (88%)
 Frame = -2

Query: 492 YWLSVGAQPSDPVQRLLFRAGVLPPPPMLAMGRKGGPRDTRPIDPMTARYLPSEKPTNSD 313
           YWLSVGAQPSDPVQ++LFRAG+LPPPPM+AMGRKGG RDTRP+DP+T R L   KPT+ +
Sbjct: 61  YWLSVGAQPSDPVQQILFRAGLLPPPPMVAMGRKGGHRDTRPVDPLTGRILTPNKPTDVE 120

Query: 312 Q 310
           Q
Sbjct: 121 Q 121


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