BLASTX nr result

ID: Panax21_contig00023411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023411
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523870.1| 5'->3' exoribonuclease, putative [Ricinus co...   216   4e-54
ref|XP_003606089.1| 5'-3' exoribonuclease [Medicago truncatula] ...   200   3e-49
ref|XP_002450312.1| hypothetical protein SORBIDRAFT_05g003580 [S...   168   1e-39
gb|AFW64884.1| hypothetical protein ZEAMMB73_783884 [Zea mays]        164   2e-38
gb|AFW61092.1| hypothetical protein ZEAMMB73_651968 [Zea mays]        163   4e-38

>ref|XP_002523870.1| 5'->3' exoribonuclease, putative [Ricinus communis]
            gi|223536958|gb|EEF38596.1| 5'->3' exoribonuclease,
            putative [Ricinus communis]
          Length = 993

 Score =  216 bits (551), Expect = 4e-54
 Identities = 116/251 (46%), Positives = 156/251 (62%), Gaps = 4/251 (1%)
 Frame = +2

Query: 53   VCIVKKPYQFLHIWILREYLELDFAICDPPEKFKPDFERIIDDFIFMCFLNGNDFLPHMP 232
            V  ++KPYQFLH+WILR+YL+L+  I DPPE F  D ERIIDDF+FMCF  GNDF+P++P
Sbjct: 283  VSFIEKPYQFLHVWILRDYLKLEMDIYDPPENFTFDSERIIDDFVFMCFFAGNDFIPNLP 342

Query: 233  TLEIHERSVNLLMHVYKTEFKNFGGYLVDMQRVEDKKAGFIKLKRVEKFILLVGSFEENI 412
            TL+IHER+V+LLM VYK  FK  GGYLVD+ +V   K  ++ LKRVEKFILL+G++EE I
Sbjct: 343  TLQIHERAVDLLMTVYKKNFKKLGGYLVDVHQVNSLKNDYLDLKRVEKFILLIGAYEEMI 402

Query: 413  FKKRSDLRERKIRRILSEDEEARVDE-DQDLGINELSIDSTILPVXXXXXXXXXXXXXXX 589
            FKKRS+LRER +R++    + A   E D ++  + L I  + L                 
Sbjct: 403  FKKRSELRERMLRKLCQHSDAANAKELDGNVEQDMLKISFSSLDAKAQISEDLVSVSAVS 462

Query: 590  XXXXANNPEILRNTXXXXXXXXXYTRKASDIFENGCLGADKVRLSAPGHKDKYYKEKFCS 769
                 +   +L+NT           R+ SD+F+NG   AD V+L   G K +YY++KF +
Sbjct: 463  ISLWFS---VLQNTKRFKEELKARLRQKSDLFQNGGFRADTVKLGTTGWKKRYYEQKFSA 519

Query: 770  E---DTESTRK 793
            E   D E  RK
Sbjct: 520  ENPSDIELIRK 530


>ref|XP_003606089.1| 5'-3' exoribonuclease [Medicago truncatula]
           gi|355507144|gb|AES88286.1| 5'-3' exoribonuclease
           [Medicago truncatula]
          Length = 866

 Score =  200 bits (508), Expect = 3e-49
 Identities = 96/233 (41%), Positives = 147/233 (63%)
 Frame = +2

Query: 74  YQFLHIWILREYLELDFAICDPPEKFKPDFERIIDDFIFMCFLNGNDFLPHMPTLEIHER 253
           ++ LHIW+LREYLE++  I DPP+ F  D ERI+DDFIF+CF +GNDFLPH+P+L IHE 
Sbjct: 262 FKLLHIWLLREYLEIEMKIEDPPKNFVFDLERIVDDFIFICFFSGNDFLPHLPSLYIHED 321

Query: 254 SVNLLMHVYKTEFKNFGGYLVDMQRVEDKKAGFIKLKRVEKFILLVGSFEENIFKKRSDL 433
           +++LLM VYK EF   GGYLVD+ ++ +K   ++KL RVEKF+L+VG++EE IF KR+ +
Sbjct: 322 AIDLLMTVYKKEFSKIGGYLVDINKIGEKHGAYVKLSRVEKFVLMVGTYEEKIFSKRTAI 381

Query: 434 RERKIRRILSEDEEARVDEDQDLGINELSIDSTILPVXXXXXXXXXXXXXXXXXXXANNP 613
           R++K+RR++S++E ++ +E       +   +++                        ++ 
Sbjct: 382 RDKKLRRLISDNENSKQEELNSHDCMDFDNENS-----SNCALRIKKAEASDNVCPQSDE 436

Query: 614 EILRNTXXXXXXXXXYTRKASDIFENGCLGADKVRLSAPGHKDKYYKEKFCSE 772
           EIL+NT           +   D+F++G    DK++L   G K++YYKEKF  E
Sbjct: 437 EILKNTKDLKEKLKKCIKDKGDLFKSGDFLTDKIKLGNVGFKERYYKEKFSVE 489


>ref|XP_002450312.1| hypothetical protein SORBIDRAFT_05g003580 [Sorghum bicolor]
            gi|241936155|gb|EES09300.1| hypothetical protein
            SORBIDRAFT_05g003580 [Sorghum bicolor]
          Length = 696

 Score =  168 bits (425), Expect = 1e-39
 Identities = 96/254 (37%), Positives = 137/254 (53%), Gaps = 10/254 (3%)
 Frame = +2

Query: 65   KKPYQFLHIWILREYLELDFAICDPPEKFKPDFERIIDDFIFMCFLNGNDFLPHMPTLEI 244
            KKPYQFL+IW+LREYLELD  I +P    K D ER+IDDFIF+CFL GNDF+PH+P++EI
Sbjct: 310  KKPYQFLNIWVLREYLELDLKIPNPV--VKTDIERLIDDFIFICFLTGNDFIPHIPSVEI 367

Query: 245  HERSVNLLMHVYKTEFKNFGGYLVDMQRVEDKKAGFIKLKRVEKFILLVGSFEENIFKKR 424
            HE +++LL+ VYK  F   GGY+V  ++++DK A ++K+ R+EKF   +   EE IF KR
Sbjct: 368  HEGAIDLLLEVYKQAFNKMGGYIVSTEKLKDKHAAYLKVLRLEKFFHELSLCEEKIFVKR 427

Query: 425  SDLRER----KIRRILSEDEEARVD------EDQDLGINELSIDSTILPVXXXXXXXXXX 574
             +LRER     +RR   E +E   D      +  DL +   S +  I             
Sbjct: 428  YELRERLQRNLVRRAAEEWKERNYDNMEENPDGPDLTVKSFSTNGGI------------- 474

Query: 575  XXXXXXXXXANNPEILRNTXXXXXXXXXYTRKASDIFENGCLGADKVRLSAPGHKDKYYK 754
                      +  ++  NT           R   DI ++G    D +RL   G K ++++
Sbjct: 475  -----CTNSQDESDVTANTLELRRNLKDTLRNKQDIVKSGACKHDAIRLGFAGWKSRFFR 529

Query: 755  EKFCSEDTESTRKV 796
            EKF  E +    K+
Sbjct: 530  EKFGVEKSNEVGKL 543


>gb|AFW64884.1| hypothetical protein ZEAMMB73_783884 [Zea mays]
          Length = 893

 Score =  164 bits (416), Expect = 2e-38
 Identities = 93/244 (38%), Positives = 132/244 (54%)
 Frame = +2

Query: 65   KKPYQFLHIWILREYLELDFAICDPPEKFKPDFERIIDDFIFMCFLNGNDFLPHMPTLEI 244
            KKPYQF++IW+LREYLELD  I +P    K D ER+IDDFIF+CFL GNDF+P +P++EI
Sbjct: 299  KKPYQFVNIWVLREYLELDLKIPNPV--VKTDIERLIDDFIFICFLTGNDFIPRIPSVEI 356

Query: 245  HERSVNLLMHVYKTEFKNFGGYLVDMQRVEDKKAGFIKLKRVEKFILLVGSFEENIFKKR 424
            HE +++LL+  YK  F   GGY+V  ++++DK A ++K+ R+EKF   +   EE IF KR
Sbjct: 357  HEGAIDLLLEAYKQTFNKMGGYIVSTEKLKDKHAAYLKVSRLEKFFHELSLCEEKIFLKR 416

Query: 425  SDLRERKIRRILSEDEEARVDEDQDLGINELSIDSTILPVXXXXXXXXXXXXXXXXXXXA 604
             DLRE   R+ L +  E   + + D  + E +    +                      A
Sbjct: 417  YDLRESLQRKFLRQAAEECKETNYDT-MEENTDGLNLTAKSFSTNCSISTYSQDESDVKA 475

Query: 605  NNPEILRNTXXXXXXXXXYTRKASDIFENGCLGADKVRLSAPGHKDKYYKEKFCSEDTES 784
            N  E+ RN            R   D+ ++G    D +RL   G K +YY+EKF  E    
Sbjct: 476  NTLELRRNLKDA-------LRNKQDLIKSGSCKHDMIRLGLAGWKSRYYREKFGVEKLSE 528

Query: 785  TRKV 796
              K+
Sbjct: 529  VGKL 532


>gb|AFW61092.1| hypothetical protein ZEAMMB73_651968 [Zea mays]
          Length = 1079

 Score =  163 bits (413), Expect = 4e-38
 Identities = 89/181 (49%), Positives = 115/181 (63%)
 Frame = +2

Query: 2   CEILSEISTGKE*SSSKVCIVKKPYQFLHIWILREYLELDFAICDPPEKFKPDFERIIDD 181
           CE  ++   G+     +  + KKPYQFL+IW LREYLE +F + +PP  F+ DFERI+DD
Sbjct: 277 CEGKAKRKAGEYDEKGEAIVPKKPYQFLNIWTLREYLEYEFRMPNPP--FQIDFERIVDD 334

Query: 182 FIFMCFLNGNDFLPHMPTLEIHERSVNLLMHVYKTEFKNFGGYLVDMQRVEDKKAGFIKL 361
           FIFMCF  GNDFLPHMPTLEI E ++NLLM VYK EF + GGYL D    +        L
Sbjct: 335 FIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFPSMGGYLTDSCTPD--------L 386

Query: 362 KRVEKFILLVGSFEENIFKKRSDLRERKIRRILSEDEEARVDEDQDLGINELSIDSTILP 541
            RVE FI  VGS+E+ IF+KR+ L +R+  RI  E  +A+  +D D  +     D  I+P
Sbjct: 387 NRVEHFIQAVGSYEDKIFQKRARLHQRQAERIKREKAQAKRGDDLDPHVR----DDLIVP 442

Query: 542 V 544
           V
Sbjct: 443 V 443


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