BLASTX nr result

ID: Panax21_contig00023396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023396
         (976 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315142.1| predicted protein [Populus trichocarpa] gi|2...   139   8e-53
ref|XP_002336996.1| predicted protein [Populus trichocarpa] gi|2...   139   9e-53
ref|XP_002273466.1| PREDICTED: probable methyltransferase PMT23 ...   135   2e-52
emb|CAN73341.1| hypothetical protein VITISV_042403 [Vitis vinifera]   135   2e-52
ref|XP_002520775.1| ATP binding protein, putative [Ricinus commu...   135   3e-52

>ref|XP_002315142.1| predicted protein [Populus trichocarpa] gi|222864182|gb|EEF01313.1|
           predicted protein [Populus trichocarpa]
          Length = 514

 Score =  139 bits (350), Expect(2) = 8e-53
 Identities = 57/72 (79%), Positives = 67/72 (93%)
 Frame = +3

Query: 471 SVIGTQRLTFPDNVYDLVHCARCRVHWDGDGGKPLMELNRVLRPGGFFIWSATPVYRTDE 650
           SVIGTQ+LTFPDN +DL+HCARCRVHWD DGGKPLMELNR+LRPGGFF+WSATPVYR D+
Sbjct: 179 SVIGTQKLTFPDNAFDLIHCARCRVHWDADGGKPLMELNRILRPGGFFVWSATPVYRDDD 238

Query: 651 KDRNVWNCLYSV 686
           +DRNVWN + ++
Sbjct: 239 RDRNVWNSMVAL 250



 Score = 95.1 bits (235), Expect(2) = 8e-53
 Identities = 43/50 (86%), Positives = 48/50 (96%)
 Frame = +2

Query: 245 TLPMIKWGKRTRVILDVGCGVASFGGYLLNKDVITMSFAPKDQHEAQIQF 394
           TLP I+WG+ TRVILDVGCGVASFGGYLL++DVITMSFAPKD+HEAQIQF
Sbjct: 119 TLPSIEWGRHTRVILDVGCGVASFGGYLLDRDVITMSFAPKDEHEAQIQF 168



 Score = 83.6 bits (205), Expect = 7e-14
 Identities = 37/48 (77%), Positives = 45/48 (93%)
 Frame = +1

Query: 832 KDRNVWNYMVALTESICWKVVAKSFPSTGIGLVIYKKPVSSACYERRK 975
           +DRNVWN MVALT+SICWKVVAK+  S+GIGLVIY+KPVSS+CYE+R+
Sbjct: 239 RDRNVWNSMVALTKSICWKVVAKTVDSSGIGLVIYQKPVSSSCYEKRQ 286


>ref|XP_002336996.1| predicted protein [Populus trichocarpa] gi|222837541|gb|EEE75906.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  139 bits (350), Expect(2) = 9e-53
 Identities = 57/72 (79%), Positives = 67/72 (93%)
 Frame = +3

Query: 471 SVIGTQRLTFPDNVYDLVHCARCRVHWDGDGGKPLMELNRVLRPGGFFIWSATPVYRTDE 650
           SVIGTQ+LTFPDN +DL+HCARCRVHWD DGGKPLMELNR+LRPGGFF+WSATPVYR D+
Sbjct: 146 SVIGTQKLTFPDNAFDLIHCARCRVHWDADGGKPLMELNRILRPGGFFVWSATPVYRDDD 205

Query: 651 KDRNVWNCLYSV 686
           +DRNVWN + ++
Sbjct: 206 RDRNVWNSMVAL 217



 Score = 95.1 bits (235), Expect(2) = 9e-53
 Identities = 43/50 (86%), Positives = 48/50 (96%)
 Frame = +2

Query: 245 TLPMIKWGKRTRVILDVGCGVASFGGYLLNKDVITMSFAPKDQHEAQIQF 394
           TLP I+WG+ TRVILDVGCGVASFGGYLL++DVITMSFAPKD+HEAQIQF
Sbjct: 86  TLPSIEWGRHTRVILDVGCGVASFGGYLLDRDVITMSFAPKDEHEAQIQF 135



 Score = 83.6 bits (205), Expect = 7e-14
 Identities = 37/48 (77%), Positives = 45/48 (93%)
 Frame = +1

Query: 832 KDRNVWNYMVALTESICWKVVAKSFPSTGIGLVIYKKPVSSACYERRK 975
           +DRNVWN MVALT+SICWKVVAK+  S+GIGLVIY+KPVSS+CYE+R+
Sbjct: 206 RDRNVWNSMVALTKSICWKVVAKTVDSSGIGLVIYQKPVSSSCYEKRQ 253


>ref|XP_002273466.1| PREDICTED: probable methyltransferase PMT23 [Vitis vinifera]
           gi|297736564|emb|CBI25435.3| unnamed protein product
           [Vitis vinifera]
          Length = 606

 Score =  135 bits (339), Expect(2) = 2e-52
 Identities = 54/72 (75%), Positives = 68/72 (94%)
 Frame = +3

Query: 471 SVIGTQRLTFPDNVYDLVHCARCRVHWDGDGGKPLMELNRVLRPGGFFIWSATPVYRTDE 650
           +VIGTQ+LT+PDNVYDL+HCARCRVHWD +GG+PLMELNR+LRPGG+F+WSATPVYR DE
Sbjct: 271 AVIGTQKLTYPDNVYDLIHCARCRVHWDANGGRPLMELNRILRPGGYFVWSATPVYRKDE 330

Query: 651 KDRNVWNCLYSV 686
           +D++VWN + +V
Sbjct: 331 RDQSVWNAMVNV 342



 Score = 98.2 bits (243), Expect(2) = 2e-52
 Identities = 45/50 (90%), Positives = 49/50 (98%)
 Frame = +2

Query: 245 TLPMIKWGKRTRVILDVGCGVASFGGYLLNKDVITMSFAPKDQHEAQIQF 394
           TLP+IKWGK+ RVILDVGCGVASFGGYLL+KDVITMSFAPKD+HEAQIQF
Sbjct: 211 TLPIIKWGKKIRVILDVGCGVASFGGYLLDKDVITMSFAPKDEHEAQIQF 260



 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 35/56 (62%), Positives = 45/56 (80%)
 Frame = +1

Query: 808 SPVI*VKWKDRNVWNYMVALTESICWKVVAKSFPSTGIGLVIYKKPVSSACYERRK 975
           +PV     +D++VWN MV +T+SICWKVVAK+    GIGLVIY+KPVSS+CYE+RK
Sbjct: 323 TPVYRKDERDQSVWNAMVNVTKSICWKVVAKTVDLNGIGLVIYQKPVSSSCYEKRK 378


>emb|CAN73341.1| hypothetical protein VITISV_042403 [Vitis vinifera]
          Length = 578

 Score =  135 bits (339), Expect(2) = 2e-52
 Identities = 54/72 (75%), Positives = 68/72 (94%)
 Frame = +3

Query: 471 SVIGTQRLTFPDNVYDLVHCARCRVHWDGDGGKPLMELNRVLRPGGFFIWSATPVYRTDE 650
           +VIGTQ+LT+PDNVYDL+HCARCRVHWD +GG+PLMELNR+LRPGG+F+WSATPVYR DE
Sbjct: 277 AVIGTQKLTYPDNVYDLIHCARCRVHWDANGGRPLMELNRILRPGGYFVWSATPVYRKDE 336

Query: 651 KDRNVWNCLYSV 686
           +D++VWN + +V
Sbjct: 337 RDQSVWNAMVNV 348



 Score = 98.2 bits (243), Expect(2) = 2e-52
 Identities = 45/50 (90%), Positives = 49/50 (98%)
 Frame = +2

Query: 245 TLPMIKWGKRTRVILDVGCGVASFGGYLLNKDVITMSFAPKDQHEAQIQF 394
           TLP+IKWGK+ RVILDVGCGVASFGGYLL+KDVITMSFAPKD+HEAQIQF
Sbjct: 217 TLPIIKWGKKIRVILDVGCGVASFGGYLLDKDVITMSFAPKDEHEAQIQF 266


>ref|XP_002520775.1| ATP binding protein, putative [Ricinus communis]
           gi|223539906|gb|EEF41484.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 603

 Score =  135 bits (340), Expect(2) = 3e-52
 Identities = 54/72 (75%), Positives = 66/72 (91%)
 Frame = +3

Query: 471 SVIGTQRLTFPDNVYDLVHCARCRVHWDGDGGKPLMELNRVLRPGGFFIWSATPVYRTDE 650
           SVIGTQ+LT+PDN +D++HCARCRVHWD DGGKPL+ELNR+LRPGGFF+WSATPVYR DE
Sbjct: 268 SVIGTQKLTYPDNAFDMIHCARCRVHWDADGGKPLIELNRILRPGGFFVWSATPVYRDDE 327

Query: 651 KDRNVWNCLYSV 686
           +D NVWN + ++
Sbjct: 328 RDHNVWNAMVAL 339



 Score = 97.1 bits (240), Expect(2) = 3e-52
 Identities = 43/50 (86%), Positives = 50/50 (100%)
 Frame = +2

Query: 245 TLPMIKWGKRTRVILDVGCGVASFGGYLLNKDVITMSFAPKDQHEAQIQF 394
           TLP+I+WG+RTRV+LDVGCGVASFGGYLL+K+VITMSFAPKD+HEAQIQF
Sbjct: 208 TLPIIQWGRRTRVVLDVGCGVASFGGYLLDKEVITMSFAPKDEHEAQIQF 257



 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 36/62 (58%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
 Frame = +1

Query: 796 FYVQS--PVI*VKWKDRNVWNYMVALTESICWKVVAKSFPSTGIGLVIYKKPVSSACYER 969
           F+V S  PV     +D NVWN MVALT S+CWK V K+  S+GIGLVIY+KPV  +CYE+
Sbjct: 314 FFVWSATPVYRDDERDHNVWNAMVALTNSMCWKNVTKTMDSSGIGLVIYQKPVLPSCYEK 373

Query: 970 RK 975
           R+
Sbjct: 374 RQ 375


Top