BLASTX nr result
ID: Panax21_contig00023366
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00023366 (429 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN66445.1| hypothetical protein VITISV_003574 [Vitis vinifera] 57 1e-12 emb|CBI31191.3| unnamed protein product [Vitis vinifera] 57 1e-12 ref|XP_003632552.1| PREDICTED: probable ADP-ribosylation factor ... 57 1e-12 ref|XP_002319204.1| predicted protein [Populus trichocarpa] gi|2... 45 7e-08 >emb|CAN66445.1| hypothetical protein VITISV_003574 [Vitis vinifera] Length = 1290 Score = 57.0 bits (136), Expect(2) = 1e-12 Identities = 26/67 (38%), Positives = 38/67 (56%) Frame = -3 Query: 415 SVQNSTPATIHSNDGGSLRNFGEISFLNTTPQWSSFHYSSPHGPHSSIPDQWHKSLHNVE 236 + +N TPA I S DGG + ++ + QW F S+ HGP SS+ + W + LHNV+ Sbjct: 945 TTENCTPAKIPSTDGGPPGKLDSVLSIDASMQWPLFQDSNAHGPSSSMSNPWDQGLHNVQ 1004 Query: 235 ATLNAGS 215 A+ N S Sbjct: 1005 ASANVTS 1011 Score = 40.4 bits (93), Expect(2) = 1e-12 Identities = 20/38 (52%), Positives = 25/38 (65%) Frame = -1 Query: 129 WNAFENPIGQLPFESIYQQSSEQVALQNPSSIADQYIG 16 WNAFE+ IG L SI Q S VA+ PS+ ADQ++G Sbjct: 1015 WNAFEDAIGHLSLGSIQQSSEPHVAVSKPST-ADQFLG 1051 >emb|CBI31191.3| unnamed protein product [Vitis vinifera] Length = 695 Score = 57.0 bits (136), Expect(2) = 1e-12 Identities = 26/67 (38%), Positives = 38/67 (56%) Frame = -3 Query: 415 SVQNSTPATIHSNDGGSLRNFGEISFLNTTPQWSSFHYSSPHGPHSSIPDQWHKSLHNVE 236 + +N TPA I S DGG + ++ + QW F S+ HGP SS+ + W + LHNV+ Sbjct: 440 TTENCTPAKIPSTDGGPPGKLDSVLSIDASMQWPLFQDSNAHGPSSSMSNPWDQGLHNVQ 499 Query: 235 ATLNAGS 215 A+ N S Sbjct: 500 ASANVTS 506 Score = 40.4 bits (93), Expect(2) = 1e-12 Identities = 20/38 (52%), Positives = 25/38 (65%) Frame = -1 Query: 129 WNAFENPIGQLPFESIYQQSSEQVALQNPSSIADQYIG 16 WNAFE+ IG L SI Q S VA+ PS+ ADQ++G Sbjct: 510 WNAFEDAIGHLSLGSIQQSSEPHVAVSKPST-ADQFLG 546 >ref|XP_003632552.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14-like [Vitis vinifera] Length = 677 Score = 57.0 bits (136), Expect(2) = 1e-12 Identities = 26/67 (38%), Positives = 38/67 (56%) Frame = -3 Query: 415 SVQNSTPATIHSNDGGSLRNFGEISFLNTTPQWSSFHYSSPHGPHSSIPDQWHKSLHNVE 236 + +N TPA I S DGG + ++ + QW F S+ HGP SS+ + W + LHNV+ Sbjct: 440 TTENCTPAKIPSTDGGPPGKLDSVLSIDASMQWPLFQDSNAHGPSSSMSNPWDQGLHNVQ 499 Query: 235 ATLNAGS 215 A+ N S Sbjct: 500 ASANVTS 506 Score = 40.4 bits (93), Expect(2) = 1e-12 Identities = 20/38 (52%), Positives = 25/38 (65%) Frame = -1 Query: 129 WNAFENPIGQLPFESIYQQSSEQVALQNPSSIADQYIG 16 WNAFE+ IG L SI Q S VA+ PS+ ADQ++G Sbjct: 510 WNAFEDAIGHLSLGSIQQSSEPHVAVSKPST-ADQFLG 546 >ref|XP_002319204.1| predicted protein [Populus trichocarpa] gi|222857580|gb|EEE95127.1| predicted protein [Populus trichocarpa] Length = 672 Score = 45.4 bits (106), Expect(2) = 7e-08 Identities = 26/65 (40%), Positives = 36/65 (55%) Frame = -3 Query: 409 QNSTPATIHSNDGGSLRNFGEISFLNTTPQWSSFHYSSPHGPHSSIPDQWHKSLHNVEAT 230 +N T + SN G S NF ++ L+T+ QW F S H SS+PD W +H+V+AT Sbjct: 427 ENLTSSVGPSNAGSS--NFDQVPSLHTSMQWPPFQNSVDHSS-SSVPDPWLGDVHSVQAT 483 Query: 229 LNAGS 215 N S Sbjct: 484 GNTSS 488 Score = 35.8 bits (81), Expect(2) = 7e-08 Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%) Frame = -1 Query: 135 QSWNAFE--NPIGQLPFESIYQQSSEQVALQNPSSIADQYIGLI 10 Q+W+AFE + + +P E I +QSSE L NPS ADQ I + Sbjct: 489 QNWSAFEFDDSVAGIPLEGI-KQSSEPQTLYNPSPTADQLINCV 531