BLASTX nr result

ID: Panax21_contig00023366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023366
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66445.1| hypothetical protein VITISV_003574 [Vitis vinifera]    57   1e-12
emb|CBI31191.3| unnamed protein product [Vitis vinifera]               57   1e-12
ref|XP_003632552.1| PREDICTED: probable ADP-ribosylation factor ...    57   1e-12
ref|XP_002319204.1| predicted protein [Populus trichocarpa] gi|2...    45   7e-08

>emb|CAN66445.1| hypothetical protein VITISV_003574 [Vitis vinifera]
          Length = 1290

 Score = 57.0 bits (136), Expect(2) = 1e-12
 Identities = 26/67 (38%), Positives = 38/67 (56%)
 Frame = -3

Query: 415  SVQNSTPATIHSNDGGSLRNFGEISFLNTTPQWSSFHYSSPHGPHSSIPDQWHKSLHNVE 236
            + +N TPA I S DGG       +  ++ + QW  F  S+ HGP SS+ + W + LHNV+
Sbjct: 945  TTENCTPAKIPSTDGGPPGKLDSVLSIDASMQWPLFQDSNAHGPSSSMSNPWDQGLHNVQ 1004

Query: 235  ATLNAGS 215
            A+ N  S
Sbjct: 1005 ASANVTS 1011



 Score = 40.4 bits (93), Expect(2) = 1e-12
 Identities = 20/38 (52%), Positives = 25/38 (65%)
 Frame = -1

Query: 129  WNAFENPIGQLPFESIYQQSSEQVALQNPSSIADQYIG 16
            WNAFE+ IG L   SI Q S   VA+  PS+ ADQ++G
Sbjct: 1015 WNAFEDAIGHLSLGSIQQSSEPHVAVSKPST-ADQFLG 1051


>emb|CBI31191.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score = 57.0 bits (136), Expect(2) = 1e-12
 Identities = 26/67 (38%), Positives = 38/67 (56%)
 Frame = -3

Query: 415 SVQNSTPATIHSNDGGSLRNFGEISFLNTTPQWSSFHYSSPHGPHSSIPDQWHKSLHNVE 236
           + +N TPA I S DGG       +  ++ + QW  F  S+ HGP SS+ + W + LHNV+
Sbjct: 440 TTENCTPAKIPSTDGGPPGKLDSVLSIDASMQWPLFQDSNAHGPSSSMSNPWDQGLHNVQ 499

Query: 235 ATLNAGS 215
           A+ N  S
Sbjct: 500 ASANVTS 506



 Score = 40.4 bits (93), Expect(2) = 1e-12
 Identities = 20/38 (52%), Positives = 25/38 (65%)
 Frame = -1

Query: 129 WNAFENPIGQLPFESIYQQSSEQVALQNPSSIADQYIG 16
           WNAFE+ IG L   SI Q S   VA+  PS+ ADQ++G
Sbjct: 510 WNAFEDAIGHLSLGSIQQSSEPHVAVSKPST-ADQFLG 546


>ref|XP_003632552.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD14-like [Vitis vinifera]
          Length = 677

 Score = 57.0 bits (136), Expect(2) = 1e-12
 Identities = 26/67 (38%), Positives = 38/67 (56%)
 Frame = -3

Query: 415 SVQNSTPATIHSNDGGSLRNFGEISFLNTTPQWSSFHYSSPHGPHSSIPDQWHKSLHNVE 236
           + +N TPA I S DGG       +  ++ + QW  F  S+ HGP SS+ + W + LHNV+
Sbjct: 440 TTENCTPAKIPSTDGGPPGKLDSVLSIDASMQWPLFQDSNAHGPSSSMSNPWDQGLHNVQ 499

Query: 235 ATLNAGS 215
           A+ N  S
Sbjct: 500 ASANVTS 506



 Score = 40.4 bits (93), Expect(2) = 1e-12
 Identities = 20/38 (52%), Positives = 25/38 (65%)
 Frame = -1

Query: 129 WNAFENPIGQLPFESIYQQSSEQVALQNPSSIADQYIG 16
           WNAFE+ IG L   SI Q S   VA+  PS+ ADQ++G
Sbjct: 510 WNAFEDAIGHLSLGSIQQSSEPHVAVSKPST-ADQFLG 546


>ref|XP_002319204.1| predicted protein [Populus trichocarpa] gi|222857580|gb|EEE95127.1|
           predicted protein [Populus trichocarpa]
          Length = 672

 Score = 45.4 bits (106), Expect(2) = 7e-08
 Identities = 26/65 (40%), Positives = 36/65 (55%)
 Frame = -3

Query: 409 QNSTPATIHSNDGGSLRNFGEISFLNTTPQWSSFHYSSPHGPHSSIPDQWHKSLHNVEAT 230
           +N T +   SN G S  NF ++  L+T+ QW  F  S  H   SS+PD W   +H+V+AT
Sbjct: 427 ENLTSSVGPSNAGSS--NFDQVPSLHTSMQWPPFQNSVDHSS-SSVPDPWLGDVHSVQAT 483

Query: 229 LNAGS 215
            N  S
Sbjct: 484 GNTSS 488



 Score = 35.8 bits (81), Expect(2) = 7e-08
 Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = -1

Query: 135 QSWNAFE--NPIGQLPFESIYQQSSEQVALQNPSSIADQYIGLI 10
           Q+W+AFE  + +  +P E I +QSSE   L NPS  ADQ I  +
Sbjct: 489 QNWSAFEFDDSVAGIPLEGI-KQSSEPQTLYNPSPTADQLINCV 531


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