BLASTX nr result
ID: Panax21_contig00023349
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00023349 (494 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK96460.1| unknown [Populus trichocarpa x Populus deltoides] 58 7e-07 ref|NP_001189737.1| Aconitase/3-isopropylmalate dehydratase prot... 56 3e-06 ref|XP_002880023.1| aconitase C-terminal domain-containing prote... 56 3e-06 ref|NP_181837.1| Aconitase/3-isopropylmalate dehydratase protein... 56 3e-06 ref|XP_003531705.1| PREDICTED: 3-isopropylmalate dehydratase sma... 55 6e-06 >gb|ABK96460.1| unknown [Populus trichocarpa x Populus deltoides] Length = 255 Score = 58.2 bits (139), Expect = 7e-07 Identities = 27/28 (96%), Positives = 27/28 (96%) Frame = -3 Query: 492 PIGDAGPVIEAGGIFAYARKAGMIPSQA 409 PIGDAGPVIEAGGIFAYARK GMIPSQA Sbjct: 227 PIGDAGPVIEAGGIFAYARKTGMIPSQA 254 >ref|NP_001189737.1| Aconitase/3-isopropylmalate dehydratase protein [Arabidopsis thaliana] gi|330255114|gb|AEC10208.1| Aconitase/3-isopropylmalate dehydratase protein [Arabidopsis thaliana] Length = 222 Score = 56.2 bits (134), Expect = 3e-06 Identities = 26/28 (92%), Positives = 27/28 (96%) Frame = -3 Query: 492 PIGDAGPVIEAGGIFAYARKAGMIPSQA 409 PIGDAGPVI+AGGIFAYARKAGMIPS A Sbjct: 194 PIGDAGPVIDAGGIFAYARKAGMIPSAA 221 >ref|XP_002880023.1| aconitase C-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297325862|gb|EFH56282.1| aconitase C-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 251 Score = 56.2 bits (134), Expect = 3e-06 Identities = 26/28 (92%), Positives = 27/28 (96%) Frame = -3 Query: 492 PIGDAGPVIEAGGIFAYARKAGMIPSQA 409 PIGDAGPVI+AGGIFAYARKAGMIPS A Sbjct: 223 PIGDAGPVIDAGGIFAYARKAGMIPSAA 250 >ref|NP_181837.1| Aconitase/3-isopropylmalate dehydratase protein [Arabidopsis thaliana] gi|3763918|gb|AAC64298.1| 3-isopropylmalate dehydratase, small subunit [Arabidopsis thaliana] gi|14334970|gb|AAK59662.1| putative 3-isopropylmalate dehydratase, small subunit [Arabidopsis thaliana] gi|17104629|gb|AAL34203.1| putative 3-isopropylmalate dehydratase, small subunit [Arabidopsis thaliana] gi|20197634|gb|AAM15163.1| 3-isopropylmalate dehydratase, small subunit [Arabidopsis thaliana] gi|21592696|gb|AAM64645.1| 3-isopropylmalate dehydratase, small subunit [Arabidopsis thaliana] gi|330255113|gb|AEC10207.1| Aconitase/3-isopropylmalate dehydratase protein [Arabidopsis thaliana] Length = 251 Score = 56.2 bits (134), Expect = 3e-06 Identities = 26/28 (92%), Positives = 27/28 (96%) Frame = -3 Query: 492 PIGDAGPVIEAGGIFAYARKAGMIPSQA 409 PIGDAGPVI+AGGIFAYARKAGMIPS A Sbjct: 223 PIGDAGPVIDAGGIFAYARKAGMIPSAA 250 >ref|XP_003531705.1| PREDICTED: 3-isopropylmalate dehydratase small subunit-like [Glycine max] Length = 245 Score = 55.1 bits (131), Expect = 6e-06 Identities = 25/27 (92%), Positives = 26/27 (96%) Frame = -3 Query: 492 PIGDAGPVIEAGGIFAYARKAGMIPSQ 412 PIGDAGPVIEAGGIFAYARK GMIPS+ Sbjct: 219 PIGDAGPVIEAGGIFAYARKTGMIPSR 245