BLASTX nr result

ID: Panax21_contig00023349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023349
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96460.1| unknown [Populus trichocarpa x Populus deltoides]       58   7e-07
ref|NP_001189737.1| Aconitase/3-isopropylmalate dehydratase prot...    56   3e-06
ref|XP_002880023.1| aconitase C-terminal domain-containing prote...    56   3e-06
ref|NP_181837.1| Aconitase/3-isopropylmalate dehydratase protein...    56   3e-06
ref|XP_003531705.1| PREDICTED: 3-isopropylmalate dehydratase sma...    55   6e-06

>gb|ABK96460.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 255

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = -3

Query: 492 PIGDAGPVIEAGGIFAYARKAGMIPSQA 409
           PIGDAGPVIEAGGIFAYARK GMIPSQA
Sbjct: 227 PIGDAGPVIEAGGIFAYARKTGMIPSQA 254


>ref|NP_001189737.1| Aconitase/3-isopropylmalate dehydratase protein [Arabidopsis
           thaliana] gi|330255114|gb|AEC10208.1|
           Aconitase/3-isopropylmalate dehydratase protein
           [Arabidopsis thaliana]
          Length = 222

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = -3

Query: 492 PIGDAGPVIEAGGIFAYARKAGMIPSQA 409
           PIGDAGPVI+AGGIFAYARKAGMIPS A
Sbjct: 194 PIGDAGPVIDAGGIFAYARKAGMIPSAA 221


>ref|XP_002880023.1| aconitase C-terminal domain-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325862|gb|EFH56282.1| aconitase
           C-terminal domain-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 251

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = -3

Query: 492 PIGDAGPVIEAGGIFAYARKAGMIPSQA 409
           PIGDAGPVI+AGGIFAYARKAGMIPS A
Sbjct: 223 PIGDAGPVIDAGGIFAYARKAGMIPSAA 250


>ref|NP_181837.1| Aconitase/3-isopropylmalate dehydratase protein [Arabidopsis
           thaliana] gi|3763918|gb|AAC64298.1| 3-isopropylmalate
           dehydratase, small subunit [Arabidopsis thaliana]
           gi|14334970|gb|AAK59662.1| putative 3-isopropylmalate
           dehydratase, small subunit [Arabidopsis thaliana]
           gi|17104629|gb|AAL34203.1| putative 3-isopropylmalate
           dehydratase, small subunit [Arabidopsis thaliana]
           gi|20197634|gb|AAM15163.1| 3-isopropylmalate
           dehydratase, small subunit [Arabidopsis thaliana]
           gi|21592696|gb|AAM64645.1| 3-isopropylmalate
           dehydratase, small subunit [Arabidopsis thaliana]
           gi|330255113|gb|AEC10207.1| Aconitase/3-isopropylmalate
           dehydratase protein [Arabidopsis thaliana]
          Length = 251

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = -3

Query: 492 PIGDAGPVIEAGGIFAYARKAGMIPSQA 409
           PIGDAGPVI+AGGIFAYARKAGMIPS A
Sbjct: 223 PIGDAGPVIDAGGIFAYARKAGMIPSAA 250


>ref|XP_003531705.1| PREDICTED: 3-isopropylmalate dehydratase small subunit-like
           [Glycine max]
          Length = 245

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = -3

Query: 492 PIGDAGPVIEAGGIFAYARKAGMIPSQ 412
           PIGDAGPVIEAGGIFAYARK GMIPS+
Sbjct: 219 PIGDAGPVIEAGGIFAYARKTGMIPSR 245


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