BLASTX nr result

ID: Panax21_contig00023337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023337
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76982.1| unknown [Picea sitchensis]                              78   7e-13
gb|ADE76387.1| unknown [Picea sitchensis]                              78   7e-13
ref|XP_002270029.1| PREDICTED: ribosome biogenesis protein BRX1 ...    75   4e-12
emb|CAN61504.1| hypothetical protein VITISV_011736 [Vitis vinifera]    75   4e-12
ref|XP_003575256.1| PREDICTED: ribosome biogenesis protein BRX1 ...    75   6e-12

>gb|ADE76982.1| unknown [Picea sitchensis]
          Length = 317

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 32/39 (82%), Positives = 36/39 (92%)
 Frame = -2

Query: 370 IWFRNYQISCPHAGADKIDRGGLEKMTLVEVGPRFCLNP 254
           +WFRNYQIS PH G +KIDRGGL+KMTL+EVGPRFCLNP
Sbjct: 212 VWFRNYQISVPHQGTEKIDRGGLDKMTLIEVGPRFCLNP 250


>gb|ADE76387.1| unknown [Picea sitchensis]
          Length = 244

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 32/39 (82%), Positives = 36/39 (92%)
 Frame = -2

Query: 370 IWFRNYQISCPHAGADKIDRGGLEKMTLVEVGPRFCLNP 254
           +WFRNYQIS PH G +KIDRGGL+KMTL+EVGPRFCLNP
Sbjct: 139 VWFRNYQISVPHQGTEKIDRGGLDKMTLIEVGPRFCLNP 177


>ref|XP_002270029.1| PREDICTED: ribosome biogenesis protein BRX1 homolog [Vitis
           vinifera] gi|297744237|emb|CBI37207.3| unnamed protein
           product [Vitis vinifera]
          Length = 316

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 32/39 (82%), Positives = 36/39 (92%)
 Frame = -2

Query: 370 IWFRNYQISCPHAGADKIDRGGLEKMTLVEVGPRFCLNP 254
           IWFRNYQIS PH  +DK+DRGGL+K+TLVEVGPRFCLNP
Sbjct: 211 IWFRNYQISVPHNESDKVDRGGLDKITLVEVGPRFCLNP 249


>emb|CAN61504.1| hypothetical protein VITISV_011736 [Vitis vinifera]
          Length = 316

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 32/39 (82%), Positives = 36/39 (92%)
 Frame = -2

Query: 370 IWFRNYQISCPHAGADKIDRGGLEKMTLVEVGPRFCLNP 254
           IWFRNYQIS PH  +DK+DRGGL+K+TLVEVGPRFCLNP
Sbjct: 211 IWFRNYQISVPHNESDKVDRGGLDKITLVEVGPRFCLNP 249


>ref|XP_003575256.1| PREDICTED: ribosome biogenesis protein BRX1 homolog [Brachypodium
           distachyon]
          Length = 322

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 32/39 (82%), Positives = 35/39 (89%)
 Frame = -2

Query: 370 IWFRNYQISCPHAGADKIDRGGLEKMTLVEVGPRFCLNP 254
           IWFRNYQIS PH   DK+D+GGL+KMTLVEVGPRFCLNP
Sbjct: 215 IWFRNYQISVPHNEIDKVDKGGLDKMTLVEVGPRFCLNP 253


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