BLASTX nr result

ID: Panax21_contig00023320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023320
         (1068 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534138.1| Protein YIF1A, putative [Ricinus communis] g...    65   3e-08
ref|XP_002310429.1| predicted protein [Populus trichocarpa] gi|2...    64   5e-08
ref|XP_002534137.1| conserved hypothetical protein [Ricinus comm...    64   8e-08
gb|AFK38884.1| unknown [Lotus japonicus]                               60   9e-07
gb|AAF98195.1|AC000107_18 F17F8.24 [Arabidopsis thaliana]              60   1e-06

>ref|XP_002534138.1| Protein YIF1A, putative [Ricinus communis]
           gi|223525796|gb|EEF28242.1| Protein YIF1A, putative
           [Ricinus communis]
          Length = 269

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 35/59 (59%), Positives = 38/59 (64%)
 Frame = -3

Query: 853 MYDNLGNQPRVSRLPTNAQQSPFGNAFXXXXXXXXXXXXXXXGEKILGSSSEYVQSNIS 677
           MY+N+G QP V R PTN Q +PFGNAF               GEKILGSSSEYVQSNIS
Sbjct: 1   MYNNVGTQPGVPRPPTNPQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNIS 59


>ref|XP_002310429.1| predicted protein [Populus trichocarpa] gi|222853332|gb|EEE90879.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 35/59 (59%), Positives = 38/59 (64%)
 Frame = -3

Query: 853 MYDNLGNQPRVSRLPTNAQQSPFGNAFXXXXXXXXXXXXXXXGEKILGSSSEYVQSNIS 677
           MY+N+G QP V R PTN Q +PFGNAF               GEKILGSSSEYVQSNIS
Sbjct: 1   MYNNVGPQPGVPRPPTNPQPTPFGNAFYGAGSGLIKGGLGAYGEKILGSSSEYVQSNIS 59


>ref|XP_002534137.1| conserved hypothetical protein [Ricinus communis]
           gi|223525795|gb|EEF28241.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 263

 Score = 63.5 bits (153), Expect = 8e-08
 Identities = 34/64 (53%), Positives = 40/64 (62%)
 Frame = -3

Query: 853 MYDNLGNQPRVSRLPTNAQQSPFGNAFXXXXXXXXXXXXXXXGEKILGSSSEYVQSNISS 674
           MY+N+G QP V R PTN Q +PFGNAF               GEKILGSSSEYVQSNI  
Sbjct: 1   MYNNVGPQPGVPRPPTNPQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNIGC 60

Query: 673 MLWV 662
           + ++
Sbjct: 61  ITYM 64


>gb|AFK38884.1| unknown [Lotus japonicus]
          Length = 269

 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 32/59 (54%), Positives = 39/59 (66%)
 Frame = -3

Query: 853 MYDNLGNQPRVSRLPTNAQQSPFGNAFXXXXXXXXXXXXXXXGEKILGSSSEYVQSNIS 677
           MY+N+G+QP V + PT++Q +PFGNAF               G KILGSSSEYVQSNIS
Sbjct: 1   MYNNVGSQPGVPQPPTSSQANPFGNAFQVAGSGLIRGGLGAYGGKILGSSSEYVQSNIS 59


>gb|AAF98195.1|AC000107_18 F17F8.24 [Arabidopsis thaliana]
          Length = 286

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 32/61 (52%), Positives = 37/61 (60%)
 Frame = -3

Query: 859 AEMYDNLGNQPRVSRLPTNAQQSPFGNAFXXXXXXXXXXXXXXXGEKILGSSSEYVQSNI 680
           AEMY+N+G QP + R P N +  PFGN F               GE+ILGSSSEYVQSNI
Sbjct: 2   AEMYNNMGPQPGMPRPPGNPEPGPFGNPFTGAGSGFIRGGLGAYGERILGSSSEYVQSNI 61

Query: 679 S 677
           S
Sbjct: 62  S 62


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