BLASTX nr result

ID: Panax21_contig00023311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023311
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26076.3| unnamed protein product [Vitis vinifera]              152   4e-35
ref|XP_002273386.1| PREDICTED: uncharacterized protein LOC100261...   152   4e-35
emb|CAN83593.1| hypothetical protein VITISV_037723 [Vitis vinifera]   150   3e-34
ref|XP_002283709.1| PREDICTED: uncharacterized protein LOC100263...   146   3e-33
ref|XP_002512426.1| RALFL33, putative [Ricinus communis] gi|2235...   144   1e-32

>emb|CBI26076.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score =  152 bits (385), Expect = 4e-35
 Identities = 87/135 (64%), Positives = 101/135 (74%), Gaps = 2/135 (1%)
 Frame = +1

Query: 31  MGKSTGFLVICAALVVTHMILLPFPAVHASGGDH--HQLSWIPAATTATCRGSMAECLAA 204
           MG S+ F++ICA + V HM+L    AV  SG DH   QL WIPA +   C+GS+AECLA 
Sbjct: 35  MGNSSAFVLICAIMAV-HMVLTS-SAVDFSG-DHLQFQLGWIPARSA--CQGSIAECLA- 88

Query: 205 GEADADELGLGFEFDLDSETSRRILATRRRYISYGALSRNSVPCSRRGASYYNCRPGAQA 384
                     G EF++DSE +RRILA++R YISYGALSRNSVPCSRRGASYYNCRPGAQA
Sbjct: 89  ----------GEEFEMDSEINRRILASKR-YISYGALSRNSVPCSRRGASYYNCRPGAQA 137

Query: 385 NPYSRGCSAITRCRR 429
           NPY+RGCSAITRCRR
Sbjct: 138 NPYTRGCSAITRCRR 152


>ref|XP_002273386.1| PREDICTED: uncharacterized protein LOC100261311 [Vitis vinifera]
          Length = 118

 Score =  152 bits (385), Expect = 4e-35
 Identities = 87/135 (64%), Positives = 101/135 (74%), Gaps = 2/135 (1%)
 Frame = +1

Query: 31  MGKSTGFLVICAALVVTHMILLPFPAVHASGGDH--HQLSWIPAATTATCRGSMAECLAA 204
           MG S+ F++ICA + V HM+L    AV  SG DH   QL WIPA +   C+GS+AECLA 
Sbjct: 1   MGNSSAFVLICAIMAV-HMVLTS-SAVDFSG-DHLQFQLGWIPARSA--CQGSIAECLA- 54

Query: 205 GEADADELGLGFEFDLDSETSRRILATRRRYISYGALSRNSVPCSRRGASYYNCRPGAQA 384
                     G EF++DSE +RRILA++R YISYGALSRNSVPCSRRGASYYNCRPGAQA
Sbjct: 55  ----------GEEFEMDSEINRRILASKR-YISYGALSRNSVPCSRRGASYYNCRPGAQA 103

Query: 385 NPYSRGCSAITRCRR 429
           NPY+RGCSAITRCRR
Sbjct: 104 NPYTRGCSAITRCRR 118


>emb|CAN83593.1| hypothetical protein VITISV_037723 [Vitis vinifera]
          Length = 118

 Score =  150 bits (378), Expect = 3e-34
 Identities = 86/135 (63%), Positives = 100/135 (74%), Gaps = 2/135 (1%)
 Frame = +1

Query: 31  MGKSTGFLVICAALVVTHMILLPFPAVHASGGDH--HQLSWIPAATTATCRGSMAECLAA 204
           M  S+ F++ICA + V HM+L    AV  SG DH   QL WIPA +   C+GS+AECLA 
Sbjct: 1   MXNSSAFVLICAIMAV-HMVLTS-SAVDFSG-DHLQFQLGWIPARSA--CQGSIAECLA- 54

Query: 205 GEADADELGLGFEFDLDSETSRRILATRRRYISYGALSRNSVPCSRRGASYYNCRPGAQA 384
                     G EF++DSE +RRILA++R YISYGALSRNSVPCSRRGASYYNCRPGAQA
Sbjct: 55  ----------GEEFEMDSEINRRILASKR-YISYGALSRNSVPCSRRGASYYNCRPGAQA 103

Query: 385 NPYSRGCSAITRCRR 429
           NPY+RGCSAITRCRR
Sbjct: 104 NPYTRGCSAITRCRR 118


>ref|XP_002283709.1| PREDICTED: uncharacterized protein LOC100263186 [Vitis vinifera]
           gi|147774701|emb|CAN61144.1| hypothetical protein
           VITISV_043554 [Vitis vinifera]
          Length = 124

 Score =  146 bits (369), Expect = 3e-33
 Identities = 80/132 (60%), Positives = 91/132 (68%)
 Frame = +1

Query: 31  MGKSTGFLVICAALVVTHMILLPFPAVHASGGDHHQLSWIPAATTATCRGSMAECLAAGE 210
           M  S G L ICAA       L+   AV A       LSWIP  T + C+G++AECLA   
Sbjct: 1   MANSVGLLAICAAA-----FLIAASAVTAVDSTADNLSWIP--TRSVCKGTVAECLALAG 53

Query: 211 ADADELGLGFEFDLDSETSRRILATRRRYISYGALSRNSVPCSRRGASYYNCRPGAQANP 390
            + DE GL  EF +DSE +RRILAT + YISYGAL RNSVPCSRRGASYYNC+PGAQANP
Sbjct: 54  GE-DEFGLTSEFAMDSEINRRILATSK-YISYGALQRNSVPCSRRGASYYNCQPGAQANP 111

Query: 391 YSRGCSAITRCR 426
           Y+RGCS ITRCR
Sbjct: 112 YNRGCSTITRCR 123


>ref|XP_002512426.1| RALFL33, putative [Ricinus communis] gi|223548387|gb|EEF49878.1|
           RALFL33, putative [Ricinus communis]
          Length = 121

 Score =  144 bits (364), Expect = 1e-32
 Identities = 79/129 (61%), Positives = 95/129 (73%), Gaps = 1/129 (0%)
 Frame = +1

Query: 43  TGFLVICAALVVTHMILLPFPAVHASGGDHHQLSWIPAA-TTATCRGSMAECLAAGEADA 219
           T   ++CA   +  +++   PAV ASG DH  L WIP   +++TC+GS+AECLA+     
Sbjct: 6   TSCFLMCATTFIL-ILIAASPAVQASG-DH--LGWIPTIRSSSTCKGSIAECLASN---- 57

Query: 220 DELGLGFEFDLDSETSRRILATRRRYISYGALSRNSVPCSRRGASYYNCRPGAQANPYSR 399
                G EF++DSETSRRILAT + YISYGAL RNSVPCSRRGASYYNC+PGAQANPYSR
Sbjct: 58  -----GEEFEMDSETSRRILATTK-YISYGALQRNSVPCSRRGASYYNCQPGAQANPYSR 111

Query: 400 GCSAITRCR 426
           GCS ITRCR
Sbjct: 112 GCSTITRCR 120


Top