BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023309
         (922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28135.3| unnamed protein product [Vitis vinifera]              172   2e-66
ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containi...   172   2e-66
gb|AEP33742.1| chlororespiratory reduction 21 [Barbarea verna]        160   1e-65
gb|AEP33734.1| chlororespiratory reduction 21, partial [Lepidium...   163   1e-63
ref|XP_002866111.1| pentatricopeptide repeat-containing protein ...   154   4e-63

>emb|CBI28135.3| unnamed protein product [Vitis vinifera]
          Length = 1974

 Score =  172 bits (437), Expect(2) = 2e-66
 Identities = 84/111 (75%), Positives = 93/111 (83%)
 Frame = -2

Query: 465  EVANRLFKRIREHNVFSWAAIIGLCCRMGYGEEALLGFCVMQEDGVLGNNFVLPNVLKAC 286
            EVA RLF R+R  NVFSWAAI+GL CRMG+ E+ALLGF  MQE+GV  +NFVLPNVLKAC
Sbjct: 1228 EVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKAC 1287

Query: 285  GALQLTGFGKGVHGYVLKFGFEDCVFVASSLVDMYGKCGVVNDAGKVFDRM 133
            G+LQL G GKGVHGYVLK GF  CVFV+SSLVDMYGKCGV+ DA KVFD M
Sbjct: 1288 GSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSM 1338



 Score =  107 bits (266), Expect(2) = 2e-66
 Identities = 51/102 (50%), Positives = 72/102 (70%), Gaps = 8/102 (7%)
 Frame = -3

Query: 758  SLQFLRNHLVKSQEN--------RSYIKHVSSLCKNGQIREALDYLTEVEFKNLPIKPEI 603
            S +F    L K QE         +SY  H+SSLCK+G ++E++  L+E+EF++  I PEI
Sbjct: 1117 SSKFASTRLAKLQEKDENRRSLYKSYFHHISSLCKDGHLQESVHLLSEMEFEDFQIGPEI 1176

Query: 602  YGEILQGCVYERDIFVG*QIHAKIIKNGEWLATNDYIETKLL 477
            YGE+LQGCVYER +  G QIHA+I+KNG++ A N+Y+ETKL+
Sbjct: 1177 YGELLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLV 1218



 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 38/101 (37%), Positives = 60/101 (59%)
 Frame = -2

Query: 426  NVFSWAAIIGLCCRMGYGEEALLGFCVMQEDGVLGNNFVLPNVLKACGALQLTGFGKGVH 247
            N+ +W  +I    + G+G EA+L F  MQE G+  +   + +VL AC  +    +G+ +H
Sbjct: 1614 NLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIH 1673

Query: 246  GYVLKFGFEDCVFVASSLVDMYGKCGVVNDAGKVFDRMQGR 124
            G++ +  F   V VA+SLVDMY KCG +++A KVF  M  +
Sbjct: 1674 GFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSK 1714



 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 34/109 (31%), Positives = 56/109 (51%)
 Frame = -2

Query: 465  EVANRLFKRIREHNVFSWAAIIGLCCRMGYGEEALLGFCVMQEDGVLGNNFVLPNVLKAC 286
            E A  +F R+ E +V +W  +I    +     +AL    +M+ + +  ++  L ++L A 
Sbjct: 1430 EDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSAS 1489

Query: 285  GALQLTGFGKGVHGYVLKFGFEDCVFVASSLVDMYGKCGVVNDAGKVFD 139
                    GK  H Y ++   E  V VA+S++DMY KC  ++DA KVFD
Sbjct: 1490 AVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFD 1538


>ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Vitis vinifera]
          Length = 858

 Score =  172 bits (437), Expect(2) = 2e-66
 Identities = 84/111 (75%), Positives = 93/111 (83%)
 Frame = -2

Query: 465 EVANRLFKRIREHNVFSWAAIIGLCCRMGYGEEALLGFCVMQEDGVLGNNFVLPNVLKAC 286
           EVA RLF R+R  NVFSWAAI+GL CRMG+ E+ALLGF  MQE+GV  +NFVLPNVLKAC
Sbjct: 133 EVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKAC 192

Query: 285 GALQLTGFGKGVHGYVLKFGFEDCVFVASSLVDMYGKCGVVNDAGKVFDRM 133
           G+LQL G GKGVHGYVLK GF  CVFV+SSLVDMYGKCGV+ DA KVFD M
Sbjct: 193 GSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSM 243



 Score =  107 bits (266), Expect(2) = 2e-66
 Identities = 51/102 (50%), Positives = 72/102 (70%), Gaps = 8/102 (7%)
 Frame = -3

Query: 758 SLQFLRNHLVKSQEN--------RSYIKHVSSLCKNGQIREALDYLTEVEFKNLPIKPEI 603
           S +F    L K QE         +SY  H+SSLCK+G ++E++  L+E+EF++  I PEI
Sbjct: 22  SSKFASTRLAKLQEKDENRRSLYKSYFHHISSLCKDGHLQESVHLLSEMEFEDFQIGPEI 81

Query: 602 YGEILQGCVYERDIFVG*QIHAKIIKNGEWLATNDYIETKLL 477
           YGE+LQGCVYER +  G QIHA+I+KNG++ A N+Y+ETKL+
Sbjct: 82  YGELLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLV 123



 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 38/101 (37%), Positives = 60/101 (59%)
 Frame = -2

Query: 426 NVFSWAAIIGLCCRMGYGEEALLGFCVMQEDGVLGNNFVLPNVLKACGALQLTGFGKGVH 247
           N+ +W  +I    + G+G EA+L F  MQE G+  +   + +VL AC  +    +G+ +H
Sbjct: 519 NLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIH 578

Query: 246 GYVLKFGFEDCVFVASSLVDMYGKCGVVNDAGKVFDRMQGR 124
           G++ +  F   V VA+SLVDMY KCG +++A KVF  M  +
Sbjct: 579 GFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSK 619



 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 34/109 (31%), Positives = 56/109 (51%)
 Frame = -2

Query: 465 EVANRLFKRIREHNVFSWAAIIGLCCRMGYGEEALLGFCVMQEDGVLGNNFVLPNVLKAC 286
           E A  +F R+ E +V +W  +I    +     +AL    +M+ + +  ++  L ++L A 
Sbjct: 335 EDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSAS 394

Query: 285 GALQLTGFGKGVHGYVLKFGFEDCVFVASSLVDMYGKCGVVNDAGKVFD 139
                   GK  H Y ++   E  V VA+S++DMY KC  ++DA KVFD
Sbjct: 395 AVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFD 443


>gb|AEP33742.1| chlororespiratory reduction 21 [Barbarea verna]
          Length = 607

 Score =  160 bits (405), Expect(2) = 1e-65
 Identities = 77/117 (65%), Positives = 93/117 (79%)
 Frame = -2

Query: 474 DAFEVANRLFKRIREHNVFSWAAIIGLCCRMGYGEEALLGFCVMQEDGVLGNNFVLPNVL 295
           D+FEVA  LF ++R  NV+SWAAIIGL CR+G  E AL+GF  M EDG+  +NFV+PNV 
Sbjct: 115 DSFEVAEVLFSKLRVRNVYSWAAIIGLKCRIGLCEGALMGFVEMFEDGIFPDNFVVPNVX 174

Query: 294 KACGALQLTGFGKGVHGYVLKFGFEDCVFVASSLVDMYGKCGVVNDAGKVFDRMQGR 124
           KACGALQ + FG+GVHGYV+K G +DCVFVASSL DMYGKCGV++DA KVFD +  R
Sbjct: 175 KACGALQWSRFGRGVHGYVVKSGXDDCVFVASSLADMYGKCGVLDDARKVFDEIPER 231



 Score =  116 bits (291), Expect(2) = 1e-65
 Identities = 55/83 (66%), Positives = 68/83 (81%)
 Frame = -3

Query: 725 SQENRSYIKHVSSLCKNGQIREALDYLTEVEFKNLPIKPEIYGEILQGCVYERDIFVG*Q 546
           S  + SY   VSSLCKNG+IREAL  +TE++F+NL I PEIYGEILQGCVYERD+  G Q
Sbjct: 26  SPSSTSYFHRVSSLCKNGEIREALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLCTGKQ 85

Query: 545 IHAKIIKNGEWLATNDYIETKLL 477
           IHA+I+KNG++ A N+YIETKL+
Sbjct: 86  IHARILKNGDFYARNEYIETKLV 108



 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
 Frame = -2

Query: 459 ANRLFKRIREHNVF----SWAAIIGLCCRMGYGEEALLGFCVMQEDGVLGNNFVLPNVLK 292
           A  +F +++   VF    SW  ++    + G  EEA+L    MQE G+  N   +   L 
Sbjct: 489 AKEMFLQMQSSGVFPNLVSWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAISITVALS 548

Query: 291 ACGALQLTGFGKGVHGYVLK-FGFEDCVFVASSLVDMYGKCGVVNDAGKVF 142
           AC  L     G+ +HGY+++       V + +SLVDMY KCG +N A  +F
Sbjct: 549 ACAHLASLHLGRSIHGYIIRNQHHSSSVSIETSLVDMYAKCGDLNKAEMIF 599



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 33/109 (30%), Positives = 55/109 (50%)
 Frame = -2

Query: 465 EVANRLFKRIREHNVFSWAAIIGLCCRMGYGEEALLGFCVMQEDGVLGNNFVLPNVLKAC 286
           E A  +F R+ E +V +W  +I    + G  E+A+    +M+ + +  +   L  ++ A 
Sbjct: 320 EYAEMIFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRLENLKYDCVTLATLMSAA 379

Query: 285 GALQLTGFGKGVHGYVLKFGFEDCVFVASSLVDMYGKCGVVNDAGKVFD 139
              Q    GK V  Y ++   E  + +AS+ +DMY KCG + DA K FD
Sbjct: 380 ARTQNLKLGKEVQCYCIRHSLESDIVLASTAIDMYAKCGSIVDARKAFD 428


>gb|AEP33734.1| chlororespiratory reduction 21, partial [Lepidium virginicum]
          Length = 788

 Score =  163 bits (412), Expect(2) = 1e-63
 Identities = 80/117 (68%), Positives = 92/117 (78%)
 Frame = -2

Query: 474 DAFEVANRLFKRIREHNVFSWAAIIGLCCRMGYGEEALLGFCVMQEDGVLGNNFVLPNVL 295
           DA EVA  LF R+R  NVFSWAAIIGL CR+G  E AL GF  M E+GVL +N+V+PNV 
Sbjct: 81  DAIEVAQNLFSRLRVRNVFSWAAIIGLKCRIGLCEGALTGFVEMIENGVLPDNYVVPNVC 140

Query: 294 KACGALQLTGFGKGVHGYVLKFGFEDCVFVASSLVDMYGKCGVVNDAGKVFDRMQGR 124
           KACGALQ T FG+GVHGY++K G  DCVFVASSL DMYGKCGV+NDA KVFD++  R
Sbjct: 141 KACGALQWTWFGRGVHGYLVKAGLHDCVFVASSLADMYGKCGVLNDARKVFDKIPER 197



 Score =  107 bits (266), Expect(2) = 1e-63
 Identities = 51/73 (69%), Positives = 62/73 (84%)
 Frame = -3

Query: 695 VSSLCKNGQIREALDYLTEVEFKNLPIKPEIYGEILQGCVYERDIFVG*QIHAKIIKNGE 516
           VSSLCK+G+IREAL  + E+EF+N+ I PEIYGEILQGCVYERD+  G QIHA+I+KNG+
Sbjct: 2   VSSLCKHGEIREALRLVKEMEFRNVRIGPEIYGEILQGCVYERDLCTGQQIHARILKNGD 61

Query: 515 WLATNDYIETKLL 477
           + A N YIETKLL
Sbjct: 62  FYARNQYIETKLL 74



 Score = 70.1 bits (170), Expect = 7e-10
 Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
 Frame = -2

Query: 498 LYRDQVTDDAFEVANRLFKRIREHNVFSWAAIIGLCCRMGYGEEALLGFCVMQEDGVLGN 319
           L R+   D+A E+  ++       N+ SW  ++    + G  EEA+     MQE G+  N
Sbjct: 446 LLRNGQVDEAKEMFLQMQSSGIFPNLISWTTMMNGLVQNGCSEEAINFLRKMQESGLRPN 505

Query: 318 NFVLPNVLKACGALQLTGFGKGVHGYVLK-FGFEDCVFVASSLVDMYGKCGVVNDAGKVF 142
           +F +   L AC  L    FG+ +HGY+++       V   +SLVDMY KCG +N A K F
Sbjct: 506 SFSITVALSACAHLASLNFGRSIHGYIIRNLQHSSSVSFVTSLVDMYAKCGDINQAEKAF 565



 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 34/109 (31%), Positives = 57/109 (52%)
 Frame = -2

Query: 465 EVANRLFKRIREHNVFSWAAIIGLCCRMGYGEEALLGFCVMQEDGVLGNNFVLPNVLKAC 286
           E A  +F R+ E +V +W  +I    + G  ++A+    +M+ + +  ++  L  ++ A 
Sbjct: 286 EYAEMIFDRMIEKDVVTWNLLISGYVQQGLVDDAIHMCKLMRLENLRYDSVTLSTLMSAA 345

Query: 285 GALQLTGFGKGVHGYVLKFGFEDCVFVASSLVDMYGKCGVVNDAGKVFD 139
                   GK V  Y ++  FE  + +AS+ VDMY KCG + DA KVFD
Sbjct: 346 ARTHNLKLGKEVQCYCIRHCFESEIVLASTAVDMYAKCGSIVDAKKVFD 394


>ref|XP_002866111.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297311946|gb|EFH42370.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 829

 Score =  154 bits (389), Expect(2) = 4e-63
 Identities = 74/117 (63%), Positives = 91/117 (77%)
 Frame = -2

Query: 474 DAFEVANRLFKRIREHNVFSWAAIIGLCCRMGYGEEALLGFCVMQEDGVLGNNFVLPNVL 295
           DA ++A  LF ++R  NVFSWAAIIG+ CR+G  E AL+GF  M E+ +  +NFV+PNV 
Sbjct: 121 DALDIAEVLFTKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVC 180

Query: 294 KACGALQLTGFGKGVHGYVLKFGFEDCVFVASSLVDMYGKCGVVNDAGKVFDRMQGR 124
           KACGALQ + FG+GVHGYV+K G EDCVFVASSL DMYGKCGV++DA KVFD +  R
Sbjct: 181 KACGALQWSRFGRGVHGYVVKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPER 237



 Score =  114 bits (285), Expect(2) = 4e-63
 Identities = 53/78 (67%), Positives = 66/78 (84%)
 Frame = -3

Query: 710 SYIKHVSSLCKNGQIREALDYLTEVEFKNLPIKPEIYGEILQGCVYERDIFVG*QIHAKI 531
           SY   VSSLCKNG+I+EAL  +TE++F+NL I PEIYGEILQGCVYERD+  G QIHA+I
Sbjct: 37  SYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLCTGKQIHARI 96

Query: 530 IKNGEWLATNDYIETKLL 477
           +KNG++ A N+YIETKL+
Sbjct: 97  LKNGDFYAKNEYIETKLV 114



 Score = 69.7 bits (169), Expect = 9e-10
 Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
 Frame = -2

Query: 426 NVFSWAAIIGLCCRMGYGEEALLGFCVMQEDGVLGNNFVLPNVLKACGALQLTGFGKGVH 247
           N+ SW  ++    + G  EEA+L    MQE G+  N   +   L AC  L    FG+ +H
Sbjct: 510 NLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAVSITVALSACANLASLHFGRSIH 569

Query: 246 GYVLK-FGFEDCVFVASSLVDMYGKCGVVNDAGKVF 142
           GY+++       V + +SLVDMY KCG +N A KVF
Sbjct: 570 GYIIRNLQHSSSVSIETSLVDMYAKCGDINKAEKVF 605



 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 35/109 (32%), Positives = 57/109 (52%)
 Frame = -2

Query: 465 EVANRLFKRIREHNVFSWAAIIGLCCRMGYGEEALLGFCVMQEDGVLGNNFVLPNVLKAC 286
           E A  +F R+ + +V +W  II    + G  E A+    +M+ + +  +   L  ++ A 
Sbjct: 326 EYAEMVFDRMIDKDVVTWNLIISGYVQQGLVENAIYMCQLMRLEKLKYDCVTLATLMSAA 385

Query: 285 GALQLTGFGKGVHGYVLKFGFEDCVFVASSLVDMYGKCGVVNDAGKVFD 139
              Q    GK V  Y ++  FE  + +AS+++DMY KCG + DA KVFD
Sbjct: 386 ARTQNLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFD 434