BLASTX nr result

ID: Panax21_contig00023296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023296
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274395.1| PREDICTED: uncharacterized protein LOC100248...    62   7e-11
ref|XP_002309041.1| predicted protein [Populus trichocarpa] gi|2...    50   1e-09
ref|XP_003554330.1| PREDICTED: uncharacterized protein LOC100783...    51   3e-08
emb|CAH59737.1| hypothetical protein [Plantago major]                  62   1e-07
ref|XP_002531334.1| conserved hypothetical protein [Ricinus comm...    49   6e-07

>ref|XP_002274395.1| PREDICTED: uncharacterized protein LOC100248230 isoform 3 [Vitis
           vinifera] gi|225439745|ref|XP_002274341.1| PREDICTED:
           uncharacterized protein LOC100248230 isoform 1 [Vitis
           vinifera] gi|147801762|emb|CAN77855.1| hypothetical
           protein VITISV_037693 [Vitis vinifera]
           gi|297741478|emb|CBI32610.3| unnamed protein product
           [Vitis vinifera]
          Length = 293

 Score = 62.0 bits (149), Expect(2) = 7e-11
 Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = +2

Query: 317 ALLAQSGYAKNESPKHS-PMTWPSDKKLVSAFKGSREKEGLLETKVCVTWAPDVYDPPPT 493
           A L ++   K+ SP  S   + P+  KLVSA KGSR+KEG+   K+ VTWAPDVYDPPPT
Sbjct: 128 ATLQENYSLKSLSPDISRTASLPTPLKLVSAMKGSRDKEGIPLKKLNVTWAPDVYDPPPT 187

Query: 494 SDDHLER 514
              H  R
Sbjct: 188 IVSHTVR 194



 Score = 30.8 bits (68), Expect(2) = 7e-11
 Identities = 13/29 (44%), Positives = 21/29 (72%)
 Frame = +3

Query: 510 KDKKQVQKYGGSSNKCFKTLEDNEKLVGS 596
           KDKKQ++K  GS ++ F++ E  +KL+ S
Sbjct: 224 KDKKQLRKIVGSGDRGFRSFEVRDKLIAS 252


>ref|XP_002309041.1| predicted protein [Populus trichocarpa] gi|222855017|gb|EEE92564.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score = 50.4 bits (119), Expect(2) = 1e-09
 Identities = 25/50 (50%), Positives = 31/50 (62%)
 Frame = +2

Query: 356 PKHSPMTWPSDKKLVSAFKGSREKEGLLETKVCVTWAPDVYDPPPTSDDH 505
           P+  P    +   +VSA KGSREK+G    K+ V+WAPDVYDP P S  H
Sbjct: 85  PEEFPHLNSTRLPIVSAMKGSREKQGGSPRKLTVSWAPDVYDPIPNSLSH 134



 Score = 38.1 bits (87), Expect(2) = 1e-09
 Identities = 19/33 (57%), Positives = 24/33 (72%), Gaps = 3/33 (9%)
 Frame = +3

Query: 510 KDKKQVQKYGGSSNKCFKTL---EDNEKLVGSP 599
           KDKKQ +K GG S+KC+KT+   ED +  VGSP
Sbjct: 174 KDKKQFRKSGGRSDKCYKTMDAPEDTDFGVGSP 206


>ref|XP_003554330.1| PREDICTED: uncharacterized protein LOC100783136 [Glycine max]
          Length = 254

 Score = 51.2 bits (121), Expect(2) = 3e-08
 Identities = 25/51 (49%), Positives = 30/51 (58%)
 Frame = +2

Query: 380 PSDKKLVSAFKGSREKEGLLETKVCVTWAPDVYDPPPTSDDHLERQEASSE 532
           P+  KL+SA KGSREK G  + K+ V WA DVYDP PT   H  R     +
Sbjct: 114 PAPLKLISAMKGSREKHGGSQVKLNVKWASDVYDPIPTLLSHTVRSNKKQQ 164



 Score = 32.7 bits (73), Expect(2) = 3e-08
 Identities = 16/40 (40%), Positives = 26/40 (65%)
 Frame = +3

Query: 519 KQVQKYGGSSNKCFKTLEDNEKLVGSPSTATDHLAKTKTD 638
           KQV+K GG+S  C+K+++  +K++G+ ST  D L     D
Sbjct: 193 KQVRKLGGTSGLCYKSMDSCDKVLGA-STELDALEVRSQD 231


>emb|CAH59737.1| hypothetical protein [Plantago major]
          Length = 196

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
 Frame = +2

Query: 350 ESPKHSPM---TWPSDKKLVSAFKGSREKEGLLETKVCVTWAPDVYDPPPTSDDHL 508
           ESP   P    + P+  KLVS+ KGSREK+G+   K+ V+WAPDVYDP PTS  H+
Sbjct: 136 ESPNRCPSRCNSLPTPSKLVSSLKGSREKQGMPPKKLSVSWAPDVYDPVPTSVSHV 191


>ref|XP_002531334.1| conserved hypothetical protein [Ricinus communis]
           gi|223529056|gb|EEF31041.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 234

 Score = 49.3 bits (116), Expect(2) = 6e-07
 Identities = 24/37 (64%), Positives = 26/37 (70%)
 Frame = +2

Query: 395 LVSAFKGSREKEGLLETKVCVTWAPDVYDPPPTSDDH 505
           LVSA KGSREK G    K+ V+WAPDVYDP P S  H
Sbjct: 99  LVSAMKGSREKLGASLRKLTVSWAPDVYDPIPNSLSH 135



 Score = 30.0 bits (66), Expect(2) = 6e-07
 Identities = 13/24 (54%), Positives = 19/24 (79%)
 Frame = +3

Query: 510 KDKKQVQKYGGSSNKCFKTLEDNE 581
           KDKKQ++K GG S++ +KTL  +E
Sbjct: 175 KDKKQLRKAGGRSDRGYKTLSISE 198


Top