BLASTX nr result

ID: Panax21_contig00023294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023294
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29971.3| unnamed protein product [Vitis vinifera]              136   2e-30
ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   136   2e-30
ref|XP_002531166.1| dead box ATP-dependent RNA helicase, putativ...   135   5e-30
ref|XP_003531232.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   134   6e-30
ref|XP_003524948.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   134   6e-30

>emb|CBI29971.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score =  136 bits (343), Expect = 2e-30
 Identities = 67/70 (95%), Positives = 70/70 (100%)
 Frame = -2

Query: 211 QMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQRLASDFLA 32
           QMIRYLALDEADRMLDMGFEPQIRKIV+QMDMPPPGVRQTMLFSATFPKEIQRLASDFL+
Sbjct: 89  QMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPKEIQRLASDFLS 148

Query: 31  TYIFLAVGRV 2
           +YIFLAVGRV
Sbjct: 149 SYIFLAVGRV 158



 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/51 (92%), Positives = 50/51 (98%)
 Frame = -3

Query: 507 LILSPTRELSCQIHEEARKFAFQTGVKVVVAYGGAPINHQLRELERGVDIL 355
           LILSPTRELSCQIH+EARKF++QTGVKVVVAYGGAPIN QLRELERGVDIL
Sbjct: 20  LILSPTRELSCQIHDEARKFSYQTGVKVVVAYGGAPINQQLRELERGVDIL 70


>ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
           vinifera]
          Length = 622

 Score =  136 bits (343), Expect = 2e-30
 Identities = 67/70 (95%), Positives = 70/70 (100%)
 Frame = -2

Query: 211 QMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQRLASDFLA 32
           QMIRYLALDEADRMLDMGFEPQIRKIV+QMDMPPPGVRQTMLFSATFPKEIQRLASDFL+
Sbjct: 314 QMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPKEIQRLASDFLS 373

Query: 31  TYIFLAVGRV 2
           +YIFLAVGRV
Sbjct: 374 SYIFLAVGRV 383



 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/51 (92%), Positives = 50/51 (98%)
 Frame = -3

Query: 507 LILSPTRELSCQIHEEARKFAFQTGVKVVVAYGGAPINHQLRELERGVDIL 355
           LILSPTRELSCQIH+EARKF++QTGVKVVVAYGGAPIN QLRELERGVDIL
Sbjct: 245 LILSPTRELSCQIHDEARKFSYQTGVKVVVAYGGAPINQQLRELERGVDIL 295


>ref|XP_002531166.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223529236|gb|EEF31209.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 585

 Score =  135 bits (339), Expect = 5e-30
 Identities = 67/70 (95%), Positives = 69/70 (98%)
 Frame = -2

Query: 211 QMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQRLASDFLA 32
           QMIRYLALDEADRMLDMGFEPQIRKIV+QMDMPPPG RQTMLFSATFPKEIQRLASDFLA
Sbjct: 279 QMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGRRQTMLFSATFPKEIQRLASDFLA 338

Query: 31  TYIFLAVGRV 2
           +YIFLAVGRV
Sbjct: 339 SYIFLAVGRV 348



 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/51 (90%), Positives = 50/51 (98%)
 Frame = -3

Query: 507 LILSPTRELSCQIHEEARKFAFQTGVKVVVAYGGAPINHQLRELERGVDIL 355
           LILSPTRELSCQIH+EA+KF++QTGVKVVVAYGGAPIN QLRELERGVDIL
Sbjct: 210 LILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDIL 260


>ref|XP_003531232.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine
           max]
          Length = 619

 Score =  134 bits (338), Expect = 6e-30
 Identities = 66/70 (94%), Positives = 68/70 (97%)
 Frame = -2

Query: 211 QMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQRLASDFLA 32
           QMIRYLALDEADRMLDMGFEPQIRKIV+QMDMPPPG RQTMLFSATFPKEIQRLASDFL+
Sbjct: 311 QMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGARQTMLFSATFPKEIQRLASDFLS 370

Query: 31  TYIFLAVGRV 2
            YIFLAVGRV
Sbjct: 371 NYIFLAVGRV 380



 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 44/51 (86%), Positives = 49/51 (96%)
 Frame = -3

Query: 507 LILSPTRELSCQIHEEARKFAFQTGVKVVVAYGGAPINHQLRELERGVDIL 355
           L+LSPTRELS QIHEEARKF++QTGV+VVVAYGGAPIN QLR+LERGVDIL
Sbjct: 242 LVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLERGVDIL 292


>ref|XP_003524948.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine
           max]
          Length = 614

 Score =  134 bits (338), Expect = 6e-30
 Identities = 66/70 (94%), Positives = 68/70 (97%)
 Frame = -2

Query: 211 QMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQRLASDFLA 32
           QMIRYLALDEADRMLDMGFEPQIRKIV+QMDMPPPG RQTMLFSATFPKEIQRLASDFL+
Sbjct: 306 QMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGARQTMLFSATFPKEIQRLASDFLS 365

Query: 31  TYIFLAVGRV 2
            YIFLAVGRV
Sbjct: 366 NYIFLAVGRV 375



 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 44/51 (86%), Positives = 49/51 (96%)
 Frame = -3

Query: 507 LILSPTRELSCQIHEEARKFAFQTGVKVVVAYGGAPINHQLRELERGVDIL 355
           L+LSPTRELS QIHEEARKF++QTGV+VVVAYGGAPIN QLR+LERGVDIL
Sbjct: 237 LVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLERGVDIL 287


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