BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023229
         (928 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95319.1| retrotransposon protein, putative, unclassified [...   293   3e-77
gb|AAP53789.1| retrotransposon protein, putative, unclassified [...   281   1e-73
emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group]           281   2e-73
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]        280   4e-73
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]     278   2e-72

>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score =  293 bits (751), Expect = 3e-77
 Identities = 140/289 (48%), Positives = 192/289 (66%), Gaps = 1/289 (0%)
 Frame = +1

Query: 1    PKAIISDRDKIFISSFWKELFKAMGTQI-LSSAYHPQTDGQSERVNQCIEMYLRCMTGHK 177
            P AI++DRD++F S+F++E+FK+   Q+  S+AYHPQTDGQ+ERVNQC+E YLRCMT  +
Sbjct: 667  PIAIVTDRDRVFTSTFFQEVFKSQKVQLRFSTAYHPQTDGQTERVNQCLESYLRCMTFQE 726

Query: 178  PAQWRKWLPLAEWWYNTNFHTSIGMTPYKALYGIDPPILSYHQARPQGNPAVQMFVQDRX 357
            P  W  W+ LAEWWYNT +HT+I MTP+KALYG  PP +S        +   ++ ++++ 
Sbjct: 727  PQNWCSWIALAEWWYNTTYHTAIQMTPFKALYGYSPPQISEFSVPCDVSQEARVTLEEKE 786

Query: 358  XXXXXXXXXXXXXXXRMKMYADRKRSEREFEVGDEVFLKLQPYRQSSVSVKKNFKLSAKY 537
                           RMK YADR R+ER+ EVGD V+LKLQPYRQ++  ++ + KL  KY
Sbjct: 787  TIVQKLKASMEDAQRRMKYYADRNRTERKLEVGDMVYLKLQPYRQNAFGIRGSLKLRGKY 846

Query: 538  YGPYPIVKRVGKVAYQLKLPPEAKIHDVFHVSQLXXXXXXXXVIQTMLSKVTEEGELKPE 717
            YGP+ ++++VG VAY+L+LP EA IH VFHVSQL        V    L  V  +G++K E
Sbjct: 847  YGPFKVLEKVGAVAYRLQLPEEAAIHPVFHVSQLKKHLGTHAVPMPNLPAVGPDGQIKTE 906

Query: 718  PIAVLDRKIIKKHNSPVTMVLVQWSNTIPEDATWEEWQRICSEFPNFNP 864
            P+AVL R++I ++N  VT  L+ WSN  P +ATWE+   I   FPNF P
Sbjct: 907  PVAVLQRRMIPRNNVAVTQWLILWSNLTPAEATWEDASYIQKVFPNFQP 955


>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score =  281 bits (720), Expect = 1e-73
 Identities = 132/289 (45%), Positives = 189/289 (65%), Gaps = 1/289 (0%)
 Frame = +1

Query: 1    PKAIISDRDKIFISSFWKELFKAMGTQI-LSSAYHPQTDGQSERVNQCIEMYLRCMTGHK 177
            P  I++DRD++F S+F++E+FK    ++  S+A+HPQTDGQ+ERVNQC+E YLR MT  +
Sbjct: 1323 PMVIVTDRDRVFTSNFFQEIFKTQKVKLRFSTAHHPQTDGQTERVNQCLESYLRSMTFQE 1382

Query: 178  PAQWRKWLPLAEWWYNTNFHTSIGMTPYKALYGIDPPILSYHQARPQGNPAVQMFVQDRX 357
            P +W  WL LAEWWYNT +HTSI MTP++ALYG  PP ++        +   ++ ++D+ 
Sbjct: 1383 PQKWFSWLALAEWWYNTTYHTSIQMTPFQALYGYPPPQITEFAIPCNMSEEARVTLEDKA 1442

Query: 358  XXXXXXXXXXXXXXXRMKMYADRKRSEREFEVGDEVFLKLQPYRQSSVSVKKNFKLSAKY 537
                           R+K YAD+ RSER  E+GD V+LKLQPYRQ ++ ++ + KL +KY
Sbjct: 1443 LILQKLKSSIGEAQRRIKFYADKGRSERTLELGDMVYLKLQPYRQVAMGIRGSLKLRSKY 1502

Query: 538  YGPYPIVKRVGKVAYQLKLPPEAKIHDVFHVSQLXXXXXXXXVIQTMLSKVTEEGELKPE 717
            YGP+ +++++G VAY+L+LP  A IH VFHVSQL        +    L  +  +G++K E
Sbjct: 1503 YGPFKVIEKMGAVAYKLQLPDGAGIHPVFHVSQLKKHLGARAIPMPNLPAIGPDGQIKTE 1562

Query: 718  PIAVLDRKIIKKHNSPVTMVLVQWSNTIPEDATWEEWQRICSEFPNFNP 864
            P AVL R++I +HN PVT  L+ W N  P +ATWE+   I + FPNF P
Sbjct: 1563 PAAVLQRRMIPRHNEPVTQWLILWENLTPAEATWEDASYIQAAFPNFQP 1611


>emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group]
          Length = 1434

 Score =  281 bits (719), Expect = 2e-73
 Identities = 140/275 (50%), Positives = 184/275 (66%), Gaps = 3/275 (1%)
 Frame = +1

Query: 1    PKAIISDRDKIFISSFWKELFKAMGTQI-LSSAYHPQTDGQSERVNQCIEMYLRCMTGHK 177
            P  I+ DRDKIF S  ++ +FK+MGT +  S++YHPQ+DGQ+ERVNQC+E YLRCM   +
Sbjct: 1162 PLVIVFDRDKIFTSDLFQNVFKSMGTTLRFSTSYHPQSDGQTERVNQCVEAYLRCMVFQE 1221

Query: 178  PAQWRKWLPLAEWWYNTNFHTSIGMTPYKALYGIDPPILSYHQARPQGNPA--VQMFVQD 351
            P  W KWLP AEWWYNT++HTS+ +TPY+ALYG+ PP  +  QA P GN    +++  Q 
Sbjct: 1222 PRDWHKWLPTAEWWYNTSYHTSLQVTPYEALYGVHPP-QNGEQAIP-GNVTEEIRITAQQ 1279

Query: 352  RXXXXXXXXXXXXXXXXRMKMYADRKRSEREFEVGDEVFLKLQPYRQSSVSVKKNFKLSA 531
            R                R+K +ADR RSER F+ GD V+LK+QPYRQ++  ++ + KL A
Sbjct: 1280 REELMLRLKDNLLRAQNRIKKFADRLRSERSFQEGDMVYLKMQPYRQNTFGLRGSLKLRA 1339

Query: 532  KYYGPYPIVKRVGKVAYQLKLPPEAKIHDVFHVSQLXXXXXXXXVIQTMLSKVTEEGELK 711
            K+YGP+ I+KR+GKVAY L+LP EA IH VFHVSQL        V    L  V E+G +K
Sbjct: 1340 KFYGPFRILKRIGKVAYHLQLPEEAGIHPVFHVSQLKKHVGNLAVPLPNLPLVDEDGNIK 1399

Query: 712  PEPIAVLDRKIIKKHNSPVTMVLVQWSNTIPEDAT 816
             EP+AVL R+++ + N PVT  LV W N  PEDAT
Sbjct: 1400 AEPVAVLARRVVPRRNEPVTQWLVHWENLTPEDAT 1434


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score =  280 bits (715), Expect = 4e-73
 Identities = 136/289 (47%), Positives = 188/289 (65%), Gaps = 1/289 (0%)
 Frame = +1

Query: 1    PKAIISDRDKIFISSFWKELFKAMGTQI-LSSAYHPQTDGQSERVNQCIEMYLRCMTGHK 177
            P AII+DRD+IF S  ++E+FK+M  ++  S++YHPQTDGQ+ERVNQC+E YLR MT  +
Sbjct: 1298 PMAIITDRDRIFTSQLFQEIFKSMKVRLKFSTSYHPQTDGQTERVNQCLESYLRSMTFQE 1357

Query: 178  PAQWRKWLPLAEWWYNTNFHTSIGMTPYKALYGIDPPILSYHQARPQGNPAVQMFVQDRX 357
            P +W  WL LAEWWYNT +HTSI MTP++ALYG  PP ++        +   ++ ++ + 
Sbjct: 1358 PTRWHSWLALAEWWYNTTYHTSIQMTPFQALYGYPPPQINEFSVPCNVSEEARVTIEQKD 1417

Query: 358  XXXXXXXXXXXXXXXRMKMYADRKRSEREFEVGDEVFLKLQPYRQSSVSVKKNFKLSAKY 537
                           R+K YADR RSER   VGD V+LKLQPYRQ++  ++ + KL +K+
Sbjct: 1418 AIIQKLKYSLTEAQRRIKHYADRNRSERTLAVGDMVYLKLQPYRQTAFGIRGSLKLRSKF 1477

Query: 538  YGPYPIVKRVGKVAYQLKLPPEAKIHDVFHVSQLXXXXXXXXVIQTMLSKVTEEGELKPE 717
            YGP+ I+++VG+VAY+L+LP  + IH VFHVSQL        V    L  V  +G++K E
Sbjct: 1478 YGPFKIMEKVGRVAYKLQLPEGSNIHPVFHVSQLKKHIGSRAVPMANLPSVGPDGQIKTE 1537

Query: 718  PIAVLDRKIIKKHNSPVTMVLVQWSNTIPEDATWEEWQRICSEFPNFNP 864
            P+AVL R++I +    VT  LV W N  P +ATWE+   I S FP+FNP
Sbjct: 1538 PVAVLKRRMIPRGGVAVTQWLVLWHNLSPSEATWEDASMIQSMFPSFNP 1586


>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1475

 Score =  278 bits (710), Expect = 2e-72
 Identities = 130/289 (44%), Positives = 192/289 (66%), Gaps = 1/289 (0%)
 Frame = +1

Query: 1    PKAIISDRDKIFISSFWKELFKAMGTQI-LSSAYHPQTDGQSERVNQCIEMYLRCMTGHK 177
            P  II+DRD+IF SS ++E+FKAM  ++  S+AYHPQ DGQ+ERVNQC+E YLR MT  +
Sbjct: 1187 PMVIITDRDRIFTSSLFQEIFKAMKVKLRFSTAYHPQMDGQTERVNQCLESYLRNMTFQE 1246

Query: 178  PAQWRKWLPLAEWWYNTNFHTSIGMTPYKALYGIDPPILSYHQARPQGNPAVQMFVQDRX 357
            P +W  WL LAEWWYNT FHT+I MTP+KA+YG  PP ++        +   ++ ++++ 
Sbjct: 1247 PHKWYSWLALAEWWYNTTFHTAIQMTPFKAMYGYSPPQINEFSVPCNISEEARVTIEEKE 1306

Query: 358  XXXXXXXXXXXXXXXRMKMYADRKRSEREFEVGDEVFLKLQPYRQSSVSVKKNFKLSAKY 537
                           RMK +AD+ R+ER  EVGD V+LKL+PYRQS+  ++ + KL +K+
Sbjct: 1307 AILNKLKNSLADAQHRMKYFADKNRTERNLEVGDMVYLKLKPYRQSAFGIRGSLKLRSKF 1366

Query: 538  YGPYPIVKRVGKVAYQLKLPPEAKIHDVFHVSQLXXXXXXXXVIQTMLSKVTEEGELKPE 717
            YGP+ +++++G++AY+L+LP +A+IH VFHVSQL        +  + L  V  +G++K E
Sbjct: 1367 YGPFKVLQKIGQLAYKLQLPDDAQIHPVFHVSQLKKHLGKHAIPMSNLPSVGPDGQIKTE 1426

Query: 718  PIAVLDRKIIKKHNSPVTMVLVQWSNTIPEDATWEEWQRICSEFPNFNP 864
            P+AVL R+++ +    VT  L+ W N  P +ATWE+   I + FP+FNP
Sbjct: 1427 PLAVLQRRMVPRKGVAVTQWLILWQNLSPAEATWEDASVIQAMFPSFNP 1475