BLASTX nr result

ID: Panax21_contig00023219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023219
         (1093 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like...   490   e-136
emb|CBI29242.3| unnamed protein product [Vitis vinifera]              486   e-135
ref|XP_002304389.1| predicted protein [Populus trichocarpa] gi|2...   484   e-134
ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family prote...   483   e-134
ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus commun...   478   e-132

>ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Vitis vinifera]
          Length = 711

 Score =  490 bits (1262), Expect = e-136
 Identities = 255/353 (72%), Positives = 292/353 (82%), Gaps = 8/353 (2%)
 Frame = -1

Query: 1093 RWSNSKLQVIVGTVAFGMGINKPDVRFVIHHTLSKSMETYYQESGRAGRDGLPSECLLYF 914
            RWSNSKLQVIVGTVAFGMGINKPDVRFVIHH+LSKSMETYYQESGRAGRDGLPSECLLYF
Sbjct: 358  RWSNSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYF 417

Query: 913  RPADAPRQSSMVFYENSGLQNLYDIIRYCQSKRECRRSAFFRHFAEPLQDCNEMCDNCSF 734
            RP D PRQSSMVFYENSGLQNLYDI++YCQSKRECRR+AFFRHFAEPLQDCN MCDNC+F
Sbjct: 418  RPGDVPRQSSMVFYENSGLQNLYDIVQYCQSKRECRRNAFFRHFAEPLQDCNGMCDNCAF 477

Query: 733  SSEVKEMDVSGHAKVMLSLLQDIQENDQRLTMLQLVDKMKVKNKGAGPELKKDELEQLVI 554
            S+EVKE+DVS  AK M+SLLQD+Q+NDQRLTMLQ+VDKMKVKNK  G +L+K+E+E LVI
Sbjct: 478  STEVKEVDVSCLAKAMISLLQDMQDNDQRLTMLQMVDKMKVKNKDLGSDLRKEEIEHLVI 537

Query: 553  QLILDRVLKEEFQHTAYSTNAYVTVGPLANQVLQGKKIVKIESSIQ-KNSMGQVKSSKRN 377
            QLI DRVLKEEFQHTAY+TNAYVT+G L  QV  GK+IVK+E S + K   G +KSSKR+
Sbjct: 538  QLIRDRVLKEEFQHTAYATNAYVTLGLLWKQVSHGKRIVKLEISTKVKTKTGNMKSSKRS 597

Query: 376  -RSSGXXXXXXXXXXXLSSIHGGIFPHSVLSTQQIGMLSTQKPISMEQLEKIIGKLKTEK 200
              SSG           LSS HGGIFPHSVLSTQQI +LS QKP S+ +LE +IGKLKTEK
Sbjct: 598  LTSSGLELKLDELRKELSSTHGGIFPHSVLSTQQISILSAQKPTSILELETMIGKLKTEK 657

Query: 199  YGCKILEEIKRY----ESKNEYEDENVHGSS--SGKRLKSKEAIVVVESSEDD 59
            YG KILEEI +Y    + +N  + +   GS   + KRLKS +A+V++ESS D+
Sbjct: 658  YGSKILEEIAKYTETEQPENRLKTDEGQGSENRAPKRLKSNKAVVLIESSGDE 710


>emb|CBI29242.3| unnamed protein product [Vitis vinifera]
          Length = 710

 Score =  486 bits (1251), Expect = e-135
 Identities = 252/352 (71%), Positives = 288/352 (81%), Gaps = 7/352 (1%)
 Frame = -1

Query: 1093 RWSNSKLQVIVGTVAFGMGINKPDVRFVIHHTLSKSMETYYQESGRAGRDGLPSECLLYF 914
            RWSNSKLQVIVGTVAFGMGINKPDVRFVIHH+LSKSMETYYQESGRAGRDGLPSECLLYF
Sbjct: 358  RWSNSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYF 417

Query: 913  RPADAPRQSSMVFYENSGLQNLYDIIRYCQSKRECRRSAFFRHFAEPLQDCNEMCDNCSF 734
            RP D PRQSSMVFYENSGLQNLYDI++YCQSKRECRR+AFFRHFAEPLQDCN MCDNC+F
Sbjct: 418  RPGDVPRQSSMVFYENSGLQNLYDIVQYCQSKRECRRNAFFRHFAEPLQDCNGMCDNCAF 477

Query: 733  SSEVKEMDVSGHAKVMLSLLQDIQENDQRLTMLQLVDKMKVKNKGAGPELKKDELEQLVI 554
            S+EVKE+DVS  AK M+SLLQD+Q+NDQRLTMLQ+VDKMKVKNK  G +L+K+E+E LVI
Sbjct: 478  STEVKEVDVSCLAKAMISLLQDMQDNDQRLTMLQMVDKMKVKNKDLGSDLRKEEIEHLVI 537

Query: 553  QLILDRVLKEEFQHTAYSTNAYVTVGPLANQVLQGKKIVKIESSIQ-KNSMGQVKSSKRN 377
            QLI DRVLKEEFQHTAY+TNAYVT+G L  QV  GK+IVK+E S + K   G +KSSKR+
Sbjct: 538  QLIRDRVLKEEFQHTAYATNAYVTLGLLWKQVSHGKRIVKLEISTKVKTKTGNMKSSKRS 597

Query: 376  -RSSGXXXXXXXXXXXLSSIHGGIFPHSVLSTQQIGMLSTQKPISMEQLEKIIGKLKTEK 200
              SSG           LSS HGGIFPHSVLSTQQI +LS QKP S+ + + +IGKLKTEK
Sbjct: 598  LTSSGLELKLDELRKELSSTHGGIFPHSVLSTQQISILSAQKPTSILEAKTMIGKLKTEK 657

Query: 199  YGCKILEEIKRYESKNEYE-----DENVHGSSSGKRLKSKEAIVVVESSEDD 59
            YG KILEEI +Y    + E     D     + + KRLKS +A+V++ESS D+
Sbjct: 658  YGSKILEEIAKYTETEQPENVPPDDRQGSENRAPKRLKSNKAVVLIESSGDE 709


>ref|XP_002304389.1| predicted protein [Populus trichocarpa] gi|222841821|gb|EEE79368.1|
            predicted protein [Populus trichocarpa]
          Length = 718

 Score =  484 bits (1246), Expect = e-134
 Identities = 253/356 (71%), Positives = 293/356 (82%), Gaps = 12/356 (3%)
 Frame = -1

Query: 1090 WSNSKLQVIVGTVAFGMGINKPDVRFVIHHTLSKSMETYYQESGRAGRDGLPSECLLYFR 911
            WS +KLQVIVGTVAFGMGINKPDVRFVIHH+LSKSMETYYQESGRAGRDGLPSEC+L++R
Sbjct: 363  WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLFYR 422

Query: 910  PADAPRQSSMVFYENSGLQNLYDIIRYCQSKRECRRSAFFRHFAEPLQDCNEMCDNCSFS 731
            PAD PRQSSMVFYENSGLQNLYDI+RYCQSKR+CRR+AFFRHFAEPLQDCN MCDNC+F 
Sbjct: 423  PADVPRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRNAFFRHFAEPLQDCNGMCDNCAFL 482

Query: 730  SEVKEMDVSGHAKVMLSLLQDIQENDQRLTMLQLVDKMKVKNKGAGPELKKDELEQLVIQ 551
            SEV E+DVS HAKVM+SLLQD QE DQRLTMLQLVDKMK K K  G ++KK+E+EQLVIQ
Sbjct: 483  SEVMEVDVSRHAKVMVSLLQDTQEKDQRLTMLQLVDKMKNK-KELGSDIKKEEMEQLVIQ 541

Query: 550  LILDRVLKEEFQHTAYSTNAYVTVGPLANQVLQGKKIVKIE-SSIQKNSMGQVKSSKRNR 374
            LILD V KEE+QHTAY+TNAYVT+GPLANQVLQGKKIVK+E SS QKN    +KS+K + 
Sbjct: 542  LILDFVFKEEYQHTAYATNAYVTIGPLANQVLQGKKIVKLEISSKQKNKGDSMKSAKHSL 601

Query: 373  S-SGXXXXXXXXXXXLSSIHGGIFPHSVLSTQQIGMLSTQKPISMEQ-----LEKIIGKL 212
            + SG           LSS HGGIFPHSVLS+QQ+ M+S+QKP S ++     LEKIIGKL
Sbjct: 602  AFSGLELKLDELREKLSSGHGGIFPHSVLSSQQMSMISSQKPSSAQEASPYHLEKIIGKL 661

Query: 211  KTEKYGCKILEEIKRYESKNE-----YEDENVHGSSSGKRLKSKEAIVVVESSEDD 59
            KTEKYG KIL+EIK+Y            +E   G+ + KRLK+K+ IVV+ESS+++
Sbjct: 662  KTEKYGSKILDEIKKYTGSEPPDNGMLNEEEGSGNRASKRLKTKKGIVVIESSDEE 717


>ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family protein expressed [Medicago
            truncatula] gi|355513912|gb|AES95535.1| ATP-dependent DNA
            helicase RecQ family protein expressed [Medicago
            truncatula]
          Length = 685

 Score =  483 bits (1242), Expect = e-134
 Identities = 242/346 (69%), Positives = 283/346 (81%)
 Frame = -1

Query: 1093 RWSNSKLQVIVGTVAFGMGINKPDVRFVIHHTLSKSMETYYQESGRAGRDGLPSECLLYF 914
            RWSN+KLQVIVGTVAFGMGINKPDVRFVIHH+LSKSMETYYQESGRAGRDGLPSECLLYF
Sbjct: 341  RWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYF 400

Query: 913  RPADAPRQSSMVFYENSGLQNLYDIIRYCQSKRECRRSAFFRHFAEPLQDCNEMCDNCSF 734
            RP D PRQSSMVFYENSGLQNLYDI+RYCQSKR+CRRSAFFRHFAEPLQ+CN MCD C+F
Sbjct: 401  RPGDVPRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRSAFFRHFAEPLQECNGMCDICAF 460

Query: 733  SSEVKEMDVSGHAKVMLSLLQDIQENDQRLTMLQLVDKMKVKNKGAGPELKKDELEQLVI 554
            S EV E+DVS HAK+M+SLLQDIQ +DQR TMLQLV+KMK K K  G  LK++E+EQL++
Sbjct: 461  SCEVNEVDVSRHAKLMVSLLQDIQASDQRSTMLQLVEKMKTKQKEIGSYLKREEMEQLIL 520

Query: 553  QLILDRVLKEEFQHTAYSTNAYVTVGPLANQVLQGKKIVKIESSIQKNSMGQVKSSKRNR 374
             L+L+R LKEEFQHTAYSTNAY+TVGPLA Q+LQGKK VK+E S ++ +    +  +   
Sbjct: 521  HLLLERALKEEFQHTAYSTNAYITVGPLAKQILQGKKTVKLEISTEEKTKASARLKRSLG 580

Query: 373  SSGXXXXXXXXXXXLSSIHGGIFPHSVLSTQQIGMLSTQKPISMEQLEKIIGKLKTEKYG 194
            SSG           LSS HGGI PHSVLSTQQI +L +QKP S+E+LEK IGKLKTEKYG
Sbjct: 581  SSGLELKLDELRKELSSNHGGILPHSVLSTQQISLLCSQKPNSLEELEKAIGKLKTEKYG 640

Query: 193  CKILEEIKRYESKNEYEDENVHGSSSGKRLKSKEAIVVVESSEDDA 56
             KIL +I +Y S  E  DE V+   + KR K+K+ +V++E+SED+A
Sbjct: 641  NKILAQIVKY-SDFELTDEQVNDGRAAKRSKTKKNLVLIETSEDEA 685


>ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus communis]
            gi|223540909|gb|EEF42467.1| DNA helicase recq1, putative
            [Ricinus communis]
          Length = 714

 Score =  478 bits (1230), Expect = e-132
 Identities = 240/350 (68%), Positives = 288/350 (82%), Gaps = 5/350 (1%)
 Frame = -1

Query: 1093 RWSNSKLQVIVGTVAFGMGINKPDVRFVIHHTLSKSMETYYQESGRAGRDGLPSECLLYF 914
            RWS +KLQVIVGTVAFGMGINKPDVRFVIHH+LSKSMETYYQESGRAGRDG PSEC+L+F
Sbjct: 365  RWSQNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGAPSECVLFF 424

Query: 913  RPADAPRQSSMVFYENSGLQNLYDIIRYCQSKRECRRSAFFRHFAEPLQDCNEMCDNCSF 734
            RP D PRQSSMVFYENSGLQNLYDI+RYCQSKR CRRSAFFRHF+EPLQDCN MCDNC+F
Sbjct: 425  RPGDVPRQSSMVFYENSGLQNLYDIVRYCQSKRTCRRSAFFRHFSEPLQDCNGMCDNCAF 484

Query: 733  SSEVKEMDVSGHAKVMLSLLQDIQENDQRLTMLQLVDKMKVKNKGAGPELKKDELEQLVI 554
            S+EV E+DV+ HAK M+SLLQD+ +NDQRLTMLQLVDK+K K+K  G +LK++E+EQLVI
Sbjct: 485  SNEVMEVDVTSHAKTMVSLLQDMHDNDQRLTMLQLVDKVKNKHKELGADLKREEIEQLVI 544

Query: 553  QLILDRVLKEEFQHTAYSTNAYVTVGPLANQVLQGKKIVKIESSIQKNSMGQVKSSKRN- 377
            QLILD V KEEFQHTAY+TNAYV  GPLA QVLQG+KIVK+E S ++N  G++  +KR+ 
Sbjct: 545  QLILDNVFKEEFQHTAYATNAYVKTGPLAKQVLQGRKIVKLEISNKQNKDGKMNKAKRSL 604

Query: 376  RSSGXXXXXXXXXXXLSSIHGGIFPHSVLSTQQIGMLSTQKPISMEQLEKIIGKLKTEKY 197
              SG           LS+ H GI PHSVLS+QQ+ M+S QKP S E+LEKIIGKLKTE+Y
Sbjct: 605  MLSGLEFKLDKLRKELSAEHEGILPHSVLSSQQMSMISAQKPNSTEELEKIIGKLKTERY 664

Query: 196  GCKILEEIKRYESKNEYEDENVHGSSS----GKRLKSKEAIVVVESSEDD 59
            G +ILEEIK++   NE ++  ++   S     KRLK+K+ +V++ESS+D+
Sbjct: 665  GNRILEEIKKFAGSNESDNGILNDEGSKRRPSKRLKTKKDLVLIESSDDE 714


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