BLASTX nr result

ID: Panax21_contig00023202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023202
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vit...   424   e-117
emb|CBI40718.3| unnamed protein product [Vitis vinifera]              424   e-117
ref|XP_002510680.1| hedgehog receptor, putative [Ricinus communi...   415   e-114
ref|XP_003523530.1| PREDICTED: niemann-Pick C1 protein-like [Gly...   409   e-112
ref|XP_003527640.1| PREDICTED: niemann-Pick C1 protein-like [Gly...   407   e-111

>ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vitis vinifera]
          Length = 1309

 Score =  424 bits (1090), Expect(2) = e-117
 Identities = 214/241 (88%), Positives = 230/241 (95%)
 Frame = +3

Query: 57   IPWFLSALPSADYAKGGHGAYATNVELKGLEDGVIQASAFRTYHTPLNKQTDFVNSMRAA 236
            +PWFL+ALPSAD +KGGHGAY ++VELKG E G+IQAS+FRTYHTPLNKQ D+VNSMRAA
Sbjct: 1042 LPWFLAALPSADCSKGGHGAYTSSVELKGFESGIIQASSFRTYHTPLNKQIDYVNSMRAA 1101

Query: 237  RKFSSRVSVSLKIEIFPYSVFYMFFEQYLDIWKTALINLAMAIGAVFIVYVVITCSFWSS 416
            R+F+SRVS SLKI+IFPYSVFYMFFEQYLDIW+TALINLA+AIGAVFIV +VITCS WSS
Sbjct: 1102 REFTSRVSDSLKIQIFPYSVFYMFFEQYLDIWRTALINLAIAIGAVFIVCLVITCSLWSS 1161

Query: 417  AIILLVLAMIVVDLMGVMAILNIQLNAVSVVNLVMAVGIAVEFCVHITHAFLVSSGDRNQ 596
            AIILLVLAMIVVDLMGVMAILNIQLNA+SVVNLVMAVGIAVEFCVHITHAF VSSGDRNQ
Sbjct: 1162 AIILLVLAMIVVDLMGVMAILNIQLNALSVVNLVMAVGIAVEFCVHITHAFSVSSGDRNQ 1221

Query: 597  RTAEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLALVILGFLHGLVFLP 776
            R  EALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLALV+LGFLHGLVFLP
Sbjct: 1222 RMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLALVLLGFLHGLVFLP 1281

Query: 777  V 779
            V
Sbjct: 1282 V 1282



 Score = 25.0 bits (53), Expect(2) = e-117
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 19   KPPCCSSDDVPCRFPG 66
            +PPCC+S+D  C   G
Sbjct: 999  QPPCCASEDGSCYLNG 1014


>emb|CBI40718.3| unnamed protein product [Vitis vinifera]
          Length = 1242

 Score =  424 bits (1090), Expect(2) = e-117
 Identities = 214/241 (88%), Positives = 230/241 (95%)
 Frame = +3

Query: 57   IPWFLSALPSADYAKGGHGAYATNVELKGLEDGVIQASAFRTYHTPLNKQTDFVNSMRAA 236
            +PWFL+ALPSAD +KGGHGAY ++VELKG E G+IQAS+FRTYHTPLNKQ D+VNSMRAA
Sbjct: 975  LPWFLAALPSADCSKGGHGAYTSSVELKGFESGIIQASSFRTYHTPLNKQIDYVNSMRAA 1034

Query: 237  RKFSSRVSVSLKIEIFPYSVFYMFFEQYLDIWKTALINLAMAIGAVFIVYVVITCSFWSS 416
            R+F+SRVS SLKI+IFPYSVFYMFFEQYLDIW+TALINLA+AIGAVFIV +VITCS WSS
Sbjct: 1035 REFTSRVSDSLKIQIFPYSVFYMFFEQYLDIWRTALINLAIAIGAVFIVCLVITCSLWSS 1094

Query: 417  AIILLVLAMIVVDLMGVMAILNIQLNAVSVVNLVMAVGIAVEFCVHITHAFLVSSGDRNQ 596
            AIILLVLAMIVVDLMGVMAILNIQLNA+SVVNLVMAVGIAVEFCVHITHAF VSSGDRNQ
Sbjct: 1095 AIILLVLAMIVVDLMGVMAILNIQLNALSVVNLVMAVGIAVEFCVHITHAFSVSSGDRNQ 1154

Query: 597  RTAEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLALVILGFLHGLVFLP 776
            R  EALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLALV+LGFLHGLVFLP
Sbjct: 1155 RMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLALVLLGFLHGLVFLP 1214

Query: 777  V 779
            V
Sbjct: 1215 V 1215



 Score = 25.0 bits (53), Expect(2) = e-117
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 19  KPPCCSSDDVPCRFPG 66
           +PPCC+S+D  C   G
Sbjct: 932 QPPCCASEDGSCYLNG 947


>ref|XP_002510680.1| hedgehog receptor, putative [Ricinus communis]
            gi|223551381|gb|EEF52867.1| hedgehog receptor, putative
            [Ricinus communis]
          Length = 1235

 Score =  415 bits (1066), Expect = e-114
 Identities = 210/241 (87%), Positives = 229/241 (95%)
 Frame = +3

Query: 57   IPWFLSALPSADYAKGGHGAYATNVELKGLEDGVIQASAFRTYHTPLNKQTDFVNSMRAA 236
            +P FL+ALPSAD AKGGHGAY ++VEL+G E GVIQAS+FRTYH PLNKQ+D+VNSMRAA
Sbjct: 968  LPLFLNALPSADCAKGGHGAYTSSVELEGYEKGVIQASSFRTYHMPLNKQSDYVNSMRAA 1027

Query: 237  RKFSSRVSVSLKIEIFPYSVFYMFFEQYLDIWKTALINLAMAIGAVFIVYVVITCSFWSS 416
            R+FSSR+S SLK+EIFPYSVFYMFFEQYLDIW+TALINLA+AIGAVF+V +VITCS WSS
Sbjct: 1028 REFSSRMSDSLKLEIFPYSVFYMFFEQYLDIWRTALINLAIAIGAVFLVCLVITCSLWSS 1087

Query: 417  AIILLVLAMIVVDLMGVMAILNIQLNAVSVVNLVMAVGIAVEFCVHITHAFLVSSGDRNQ 596
            AIILLVLAMIV+DLMGVMAILNIQLNAVSVVNLVMAVGIAVEFCVHITHAF VSSGDR+Q
Sbjct: 1088 AIILLVLAMIVIDLMGVMAILNIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSGDRDQ 1147

Query: 597  RTAEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLALVILGFLHGLVFLP 776
            R  EALGTMGASVFSGITLTKLVGV+VLCFSRTEVFVVYYFQMYLALV+LGFLHGLVFLP
Sbjct: 1148 RVKEALGTMGASVFSGITLTKLVGVLVLCFSRTEVFVVYYFQMYLALVLLGFLHGLVFLP 1207

Query: 777  V 779
            V
Sbjct: 1208 V 1208


>ref|XP_003523530.1| PREDICTED: niemann-Pick C1 protein-like [Glycine max]
          Length = 1257

 Score =  409 bits (1051), Expect = e-112
 Identities = 204/241 (84%), Positives = 229/241 (95%)
 Frame = +3

Query: 57   IPWFLSALPSADYAKGGHGAYATNVELKGLEDGVIQASAFRTYHTPLNKQTDFVNSMRAA 236
            +PWFLS+LPSAD AKGGHGAY ++VELKG ++G+I+AS+FRTYHTPLNKQ D+VNSMRAA
Sbjct: 992  LPWFLSSLPSADCAKGGHGAYTSSVELKGYDNGIIKASSFRTYHTPLNKQIDYVNSMRAA 1051

Query: 237  RKFSSRVSVSLKIEIFPYSVFYMFFEQYLDIWKTALINLAMAIGAVFIVYVVITCSFWSS 416
            R+FSSRVS SLKIEIFPYSVFYMFFEQYL IWKTAL+NLA+AIGAVFIV +VIT S WSS
Sbjct: 1052 REFSSRVSDSLKIEIFPYSVFYMFFEQYLHIWKTALVNLAIAIGAVFIVCLVITSSLWSS 1111

Query: 417  AIILLVLAMIVVDLMGVMAILNIQLNAVSVVNLVMAVGIAVEFCVHITHAFLVSSGDRNQ 596
            +IILLVLAMIVVDLMGVMAILNIQLNA+SVVNLVM+VGIAVEFCVH+TH+F V+SGDR+Q
Sbjct: 1112 SIILLVLAMIVVDLMGVMAILNIQLNALSVVNLVMSVGIAVEFCVHMTHSFTVASGDRDQ 1171

Query: 597  RTAEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLALVILGFLHGLVFLP 776
            R  EALGTMGASVFSGITLTKLVGVIVLCFSRTEVFV+YYF+MYL+LV+LGFLHGLVFLP
Sbjct: 1172 RAKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVIYYFRMYLSLVLLGFLHGLVFLP 1231

Query: 777  V 779
            V
Sbjct: 1232 V 1232


>ref|XP_003527640.1| PREDICTED: niemann-Pick C1 protein-like [Glycine max]
          Length = 1283

 Score =  407 bits (1046), Expect = e-111
 Identities = 202/241 (83%), Positives = 228/241 (94%)
 Frame = +3

Query: 57   IPWFLSALPSADYAKGGHGAYATNVELKGLEDGVIQASAFRTYHTPLNKQTDFVNSMRAA 236
            +PWFLS+LPSAD AKGGHGAY ++VELKG ++G+IQAS+FRTYHTPLNKQ D+VNSMRAA
Sbjct: 1018 LPWFLSSLPSADCAKGGHGAYTSSVELKGYDNGIIQASSFRTYHTPLNKQVDYVNSMRAA 1077

Query: 237  RKFSSRVSVSLKIEIFPYSVFYMFFEQYLDIWKTALINLAMAIGAVFIVYVVITCSFWSS 416
            R+FSSRVS SLKIEIFPYSVFYMFFEQYL IWKTALINLA+AIGAVFIV ++ T S WSS
Sbjct: 1078 REFSSRVSDSLKIEIFPYSVFYMFFEQYLHIWKTALINLAIAIGAVFIVCLIFTSSLWSS 1137

Query: 417  AIILLVLAMIVVDLMGVMAILNIQLNAVSVVNLVMAVGIAVEFCVHITHAFLVSSGDRNQ 596
            +IILLVLAMIVVDLMG+MAILNIQLNA+SVVNLVM+VGIAVEFCVH+TH+F V+SGDR+Q
Sbjct: 1138 SIILLVLAMIVVDLMGLMAILNIQLNALSVVNLVMSVGIAVEFCVHMTHSFTVASGDRDQ 1197

Query: 597  RTAEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLALVILGFLHGLVFLP 776
            R  EALGTMGASVFSGITLTKLVGVIVLCFS+TEVFV+YYF+MYL+LV+LGFLHGLVFLP
Sbjct: 1198 RAKEALGTMGASVFSGITLTKLVGVIVLCFSKTEVFVIYYFRMYLSLVLLGFLHGLVFLP 1257

Query: 777  V 779
            V
Sbjct: 1258 V 1258


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