BLASTX nr result

ID: Panax21_contig00023184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023184
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512778.1| Ribulose bisphosphate carboxylase/oxygenase ...   374   e-102
ref|XP_002299165.1| predicted protein [Populus trichocarpa] gi|2...   373   e-101
ref|XP_002270825.1| PREDICTED: ribulose bisphosphate carboxylase...   371   e-101
emb|CBI25238.3| unnamed protein product [Vitis vinifera]              370   e-100
ref|XP_003543716.1| PREDICTED: ribulose bisphosphate carboxylase...   370   e-100

>ref|XP_002512778.1| Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast
           precursor, putative [Ricinus communis]
           gi|223547789|gb|EEF49281.1| Ribulose bisphosphate
           carboxylase/oxygenase activase, chloroplast precursor,
           putative [Ricinus communis]
          Length = 428

 Score =  374 bits (961), Expect = e-102
 Identities = 179/201 (89%), Positives = 191/201 (95%)
 Frame = -1

Query: 604 VCHIVKNYIAHLLNTKIPLILGIWGGKGQGKSFQTELIFQAMGIEPVIMSAGELESERAG 425
           +CHIVKNYIAHLLN K+PLILGIWGGKGQGKSFQTEL+FQAMGIEPVIMSAGELESERAG
Sbjct: 143 ICHIVKNYIAHLLNVKVPLILGIWGGKGQGKSFQTELVFQAMGIEPVIMSAGELESERAG 202

Query: 424 EPGRLIRDRYRTAFQVVHNQGKMSCLMINDIDAGVGRFGNTQMTVNNQIVVGTLMNLADN 245
           EPG+LIR+RYRTA QVV NQGKMSCLMINDIDAG+GRFGNTQMTVNNQIVVGTLMNL DN
Sbjct: 203 EPGKLIRERYRTASQVVQNQGKMSCLMINDIDAGLGRFGNTQMTVNNQIVVGTLMNLVDN 262

Query: 244 PTRVSIGQDWRESDITKRIPIIFTGNDFSTLYAPLIRDGRMEKFYWEPNHEEIINIVNRM 65
           PTRVS GQDWRESDIT RIPII TGNDFST+YAPLIRDGRMEKF+W+PN E+I+NIV+RM
Sbjct: 263 PTRVSTGQDWRESDITNRIPIIVTGNDFSTIYAPLIRDGRMEKFFWQPNQEDIVNIVHRM 322

Query: 64  YEKDGILRDEVVSIVNTFPNQ 2
           YEKDGI RDEVVSIV TFPNQ
Sbjct: 323 YEKDGISRDEVVSIVKTFPNQ 343


>ref|XP_002299165.1| predicted protein [Populus trichocarpa] gi|222846423|gb|EEE83970.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  373 bits (957), Expect = e-101
 Identities = 177/201 (88%), Positives = 191/201 (95%)
 Frame = -1

Query: 604 VCHIVKNYIAHLLNTKIPLILGIWGGKGQGKSFQTELIFQAMGIEPVIMSAGELESERAG 425
           VCHIVKNY+AH LN K+PLILGIWGGKGQGKSFQTELIFQ +G+EPVIMSAGELESERAG
Sbjct: 143 VCHIVKNYLAHRLNVKVPLILGIWGGKGQGKSFQTELIFQTLGVEPVIMSAGELESERAG 202

Query: 424 EPGRLIRDRYRTAFQVVHNQGKMSCLMINDIDAGVGRFGNTQMTVNNQIVVGTLMNLADN 245
           EPGRLIR+RYRTA QVV NQGKMSCLMIND+DAG+GRFGNTQMTVNNQIVVGTLMNL+DN
Sbjct: 203 EPGRLIRERYRTASQVVQNQGKMSCLMINDLDAGLGRFGNTQMTVNNQIVVGTLMNLSDN 262

Query: 244 PTRVSIGQDWRESDITKRIPIIFTGNDFSTLYAPLIRDGRMEKFYWEPNHEEIINIVNRM 65
           PTRVSIGQDWRESDIT R+PII TGNDFST+YAPLIRDGRMEKFYW+PN E+I+NIV+RM
Sbjct: 263 PTRVSIGQDWRESDITNRVPIIVTGNDFSTIYAPLIRDGRMEKFYWQPNREDIVNIVHRM 322

Query: 64  YEKDGILRDEVVSIVNTFPNQ 2
           YEKDGI RDEVVSIVN FPNQ
Sbjct: 323 YEKDGISRDEVVSIVNKFPNQ 343


>ref|XP_002270825.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase,
           chloroplastic-like [Vitis vinifera]
          Length = 442

 Score =  371 bits (953), Expect = e-101
 Identities = 177/201 (88%), Positives = 191/201 (95%)
 Frame = -1

Query: 604 VCHIVKNYIAHLLNTKIPLILGIWGGKGQGKSFQTELIFQAMGIEPVIMSAGELESERAG 425
           VCHIVKNYIAHLLNT +PLILGIWGGKGQGKSFQTELIFQAMGIEPVIMSAGELESERAG
Sbjct: 157 VCHIVKNYIAHLLNTNVPLILGIWGGKGQGKSFQTELIFQAMGIEPVIMSAGELESERAG 216

Query: 424 EPGRLIRDRYRTAFQVVHNQGKMSCLMINDIDAGVGRFGNTQMTVNNQIVVGTLMNLADN 245
           EPG+LIR+RYRTA QVV NQGKMSCLMINDIDAG+GRFGNTQ+TVNNQI VGTLMNL+DN
Sbjct: 217 EPGKLIRERYRTASQVVQNQGKMSCLMINDIDAGIGRFGNTQVTVNNQIAVGTLMNLSDN 276

Query: 244 PTRVSIGQDWRESDITKRIPIIFTGNDFSTLYAPLIRDGRMEKFYWEPNHEEIINIVNRM 65
           PTRVSIGQDWRE+DIT R+PII TGNDFST+YAPLIRDGRM+KFYW+P HE+IINIV+RM
Sbjct: 277 PTRVSIGQDWRETDITNRVPIIVTGNDFSTIYAPLIRDGRMDKFYWQPTHEDIINIVDRM 336

Query: 64  YEKDGILRDEVVSIVNTFPNQ 2
           YEKDGI RD VV IV+TFPNQ
Sbjct: 337 YEKDGISRDAVVRIVDTFPNQ 357


>emb|CBI25238.3| unnamed protein product [Vitis vinifera]
          Length = 440

 Score =  370 bits (950), Expect = e-100
 Identities = 176/201 (87%), Positives = 191/201 (95%)
 Frame = -1

Query: 604 VCHIVKNYIAHLLNTKIPLILGIWGGKGQGKSFQTELIFQAMGIEPVIMSAGELESERAG 425
           +CHIVKNYIAHLLNT +PLILGIWGGKGQGKSFQTELIFQAMGIEPVIMSAGELESERAG
Sbjct: 155 MCHIVKNYIAHLLNTNVPLILGIWGGKGQGKSFQTELIFQAMGIEPVIMSAGELESERAG 214

Query: 424 EPGRLIRDRYRTAFQVVHNQGKMSCLMINDIDAGVGRFGNTQMTVNNQIVVGTLMNLADN 245
           EPG+LIR+RYRTA QVV NQGKMSCLMINDIDAG+GRFGNTQ+TVNNQI VGTLMNL+DN
Sbjct: 215 EPGKLIRERYRTASQVVQNQGKMSCLMINDIDAGIGRFGNTQVTVNNQIAVGTLMNLSDN 274

Query: 244 PTRVSIGQDWRESDITKRIPIIFTGNDFSTLYAPLIRDGRMEKFYWEPNHEEIINIVNRM 65
           PTRVSIGQDWRE+DIT R+PII TGNDFST+YAPLIRDGRM+KFYW+P HE+IINIV+RM
Sbjct: 275 PTRVSIGQDWRETDITNRVPIIVTGNDFSTIYAPLIRDGRMDKFYWQPTHEDIINIVDRM 334

Query: 64  YEKDGILRDEVVSIVNTFPNQ 2
           YEKDGI RD VV IV+TFPNQ
Sbjct: 335 YEKDGISRDAVVRIVDTFPNQ 355


>ref|XP_003543716.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase,
           chloroplastic-like [Glycine max]
          Length = 428

 Score =  370 bits (949), Expect = e-100
 Identities = 176/201 (87%), Positives = 191/201 (95%)
 Frame = -1

Query: 604 VCHIVKNYIAHLLNTKIPLILGIWGGKGQGKSFQTELIFQAMGIEPVIMSAGELESERAG 425
           VCHIVKNY+A +LNTK+PLILGIWGGKGQGKSFQTELIFQAMGIEPVIMSAGELESERAG
Sbjct: 143 VCHIVKNYLARVLNTKVPLILGIWGGKGQGKSFQTELIFQAMGIEPVIMSAGELESERAG 202

Query: 424 EPGRLIRDRYRTAFQVVHNQGKMSCLMINDIDAGVGRFGNTQMTVNNQIVVGTLMNLADN 245
           EPG+LIR+RYRTA QVV NQGKMSCLMINDIDAG+GRFGNTQMTVNNQIVVGTLMNL+DN
Sbjct: 203 EPGKLIRERYRTASQVVQNQGKMSCLMINDIDAGLGRFGNTQMTVNNQIVVGTLMNLSDN 262

Query: 244 PTRVSIGQDWRESDITKRIPIIFTGNDFSTLYAPLIRDGRMEKFYWEPNHEEIINIVNRM 65
           PTRVS+GQDWRESD+T RIPII TGNDFSTLYAPLIRDGRM+KFYW+PN E+I+NIV+RM
Sbjct: 263 PTRVSVGQDWRESDVTNRIPIIVTGNDFSTLYAPLIRDGRMDKFYWQPNQEDILNIVHRM 322

Query: 64  YEKDGILRDEVVSIVNTFPNQ 2
           YEKD I RDEV  +VNTFPNQ
Sbjct: 323 YEKDSISRDEVERVVNTFPNQ 343


Top