BLASTX nr result

ID: Panax21_contig00023162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023162
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35443.3| unnamed protein product [Vitis vinifera]               99   8e-19
ref|XP_002263595.1| PREDICTED: DNA polymerase V-like [Vitis vini...    99   8e-19
emb|CAN80013.1| hypothetical protein VITISV_030078 [Vitis vinifera]    99   8e-19
ref|XP_002313953.1| predicted protein [Populus trichocarpa] gi|2...    95   9e-18
ref|XP_002300310.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17

>emb|CBI35443.3| unnamed protein product [Vitis vinifera]
          Length = 1237

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 50/80 (62%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
 Frame = -1

Query: 629  SKKMLKSHLPKLCHLMKELMTNMPDKQARRA-VRNFCGKVFKTLTSLDLSASFLNTLEPE 453
            SKKMLKSHLPKL  L+K L+TNMP+KQARR  VR FCGKVF+ +++ +L+ SFL  L P+
Sbjct: 1157 SKKMLKSHLPKLGLLIKVLVTNMPEKQARRTHVRKFCGKVFQMISTSNLTKSFLKDLPPD 1216

Query: 452  VHAACESQLGGIFLALKRQG 393
             H ACE+ LG  FLALK+ G
Sbjct: 1217 AHVACETHLGEAFLALKKLG 1236


>ref|XP_002263595.1| PREDICTED: DNA polymerase V-like [Vitis vinifera]
          Length = 1280

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 50/80 (62%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
 Frame = -1

Query: 629  SKKMLKSHLPKLCHLMKELMTNMPDKQARRA-VRNFCGKVFKTLTSLDLSASFLNTLEPE 453
            SKKMLKSHLPKL  L+K L+TNMP+KQARR  VR FCGKVF+ +++ +L+ SFL  L P+
Sbjct: 1200 SKKMLKSHLPKLGLLIKVLVTNMPEKQARRTHVRKFCGKVFQMISTSNLTKSFLKDLPPD 1259

Query: 452  VHAACESQLGGIFLALKRQG 393
             H ACE+ LG  FLALK+ G
Sbjct: 1260 AHVACETHLGEAFLALKKLG 1279


>emb|CAN80013.1| hypothetical protein VITISV_030078 [Vitis vinifera]
          Length = 1395

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 50/80 (62%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
 Frame = -1

Query: 629  SKKMLKSHLPKLCHLMKELMTNMPDKQARRA-VRNFCGKVFKTLTSLDLSASFLNTLEPE 453
            SKKMLKSHLPKL  L+K L+TNMP+KQARR  VR FCGKVF+ +++ +L+ SFL  L P+
Sbjct: 1315 SKKMLKSHLPKLGLLIKVLVTNMPEKQARRTHVRKFCGKVFQMISTSNLTKSFLKDLPPD 1374

Query: 452  VHAACESQLGGIFLALKRQG 393
             H ACE+ LG  FLALK+ G
Sbjct: 1375 AHVACETHLGEAFLALKKLG 1394


>ref|XP_002313953.1| predicted protein [Populus trichocarpa] gi|222850361|gb|EEE87908.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 47/78 (60%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
 Frame = -1

Query: 629 SKKMLKSHLPKLCHLMKELMTNMPDKQARRA-VRNFCGKVFKTLTSLDLSASFLNTLEPE 453
           SKK+LK+HL KL HL+KEL TNMP+K +RRA  R FCGKVF+ +++ DL+ SFL  L PE
Sbjct: 200 SKKVLKNHLQKLSHLIKELATNMPEKPSRRAEARKFCGKVFRYVSTYDLTKSFLKYLAPE 259

Query: 452 VHAACESQLGGIFLALKR 399
             AACESQLG ++L  K+
Sbjct: 260 AEAACESQLGELYLNFKK 277


>ref|XP_002300310.1| predicted protein [Populus trichocarpa] gi|222847568|gb|EEE85115.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 47/77 (61%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
 Frame = -1

Query: 629 SKKMLKSHLPKLCHLMKELMTNMPDKQARRA-VRNFCGKVFKTLTSLDLSASFLNTLEPE 453
           SKK+LK+HL KL HL+KEL+T MP+KQ+RRA VR FCGKVF+ +++ DL+  FL  L PE
Sbjct: 200 SKKILKNHLQKLSHLIKELVTKMPEKQSRRAEVRKFCGKVFRYVSTYDLTKCFLKYLGPE 259

Query: 452 VHAACESQLGGIFLALK 402
             AACESQLG ++L  K
Sbjct: 260 AEAACESQLGELYLNFK 276


Top