BLASTX nr result

ID: Panax21_contig00023151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023151
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316901.1| thioredoxin m [Populus trichocarpa] gi|22285...   100   9e-20
ref|XP_002282265.2| PREDICTED: thioredoxin M4, chloroplastic-lik...    99   4e-19
gb|ADQ53450.1| plastid thioredoxin M precursor [Nicotiana tabacum]     99   5e-19
gb|AFX67008.1| putative thioredoxin m2 [Solanum tuberosum]             97   1e-18
gb|ABK96292.1| unknown [Populus trichocarpa x Populus deltoides]       95   7e-18

>ref|XP_002316901.1| thioredoxin m [Populus trichocarpa] gi|222859966|gb|EEE97513.1|
           thioredoxin m [Populus trichocarpa]
          Length = 190

 Score =  100 bits (250), Expect = 9e-20
 Identities = 52/95 (54%), Positives = 61/95 (64%), Gaps = 6/95 (6%)
 Frame = -3

Query: 267 RSSVNLPESRGLKI------LPTRATGXXXXXXXXXXXXXXXVCEAPEIAVVVPLVTDAT 106
           R S+  P+ +GLKI         R+ G               VCEA +IAV VP VTDAT
Sbjct: 35  RRSLRFPQLKGLKIHFHSSSTVNRSLGSVSQSSSRLACAGRIVCEAQDIAVKVPAVTDAT 94

Query: 105 WQSVVLESDLPVLVEFWAPWCGPCRMIRPIIDELA 1
           W+S+VLES+ PVLVEFWAPWCGPCRMI P+IDELA
Sbjct: 95  WKSLVLESESPVLVEFWAPWCGPCRMIHPVIDELA 129


>ref|XP_002282265.2| PREDICTED: thioredoxin M4, chloroplastic-like [Vitis vinifera]
           gi|302143024|emb|CBI20319.3| unnamed protein product
           [Vitis vinifera]
          Length = 188

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 51/92 (55%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
 Frame = -3

Query: 267 RSSVNLPESRGLKILPT---RATGXXXXXXXXXXXXXXXVCEAPEIAVVVPLVTDATWQS 97
           R    LPE  GLKI P+   R+                 VCEA E AV VP V DATWQS
Sbjct: 36  RGLARLPEFSGLKIQPSLASRSVAAAGRSSRVGRRVGGVVCEAQETAVEVPAVIDATWQS 95

Query: 96  VVLESDLPVLVEFWAPWCGPCRMIRPIIDELA 1
           +VL++D PVLVEFWAPWCGPCRMI P+I+ELA
Sbjct: 96  LVLDADTPVLVEFWAPWCGPCRMIHPVINELA 127


>gb|ADQ53450.1| plastid thioredoxin M precursor [Nicotiana tabacum]
          Length = 182

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 49/89 (55%), Positives = 58/89 (65%)
 Frame = -3

Query: 267 RSSVNLPESRGLKILPTRATGXXXXXXXXXXXXXXXVCEAPEIAVVVPLVTDATWQSVVL 88
           RSSV   + RGLKI  TR++                VCEA   A+ V  V D TW+S+V+
Sbjct: 33  RSSVRFSQFRGLKIQSTRSSVSTTSCSKIIPGRARIVCEAQNTALEVGAVNDKTWKSLVV 92

Query: 87  ESDLPVLVEFWAPWCGPCRMIRPIIDELA 1
           ESD+PVLVEFWAPWCGPCRMI P+IDELA
Sbjct: 93  ESDIPVLVEFWAPWCGPCRMIHPVIDELA 121


>gb|AFX67008.1| putative thioredoxin m2 [Solanum tuberosum]
          Length = 182

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 48/89 (53%), Positives = 58/89 (65%)
 Frame = -3

Query: 267 RSSVNLPESRGLKILPTRATGXXXXXXXXXXXXXXXVCEAPEIAVVVPLVTDATWQSVVL 88
           RSSV   +S GLKI P R++                VCEA   AV V  V+D TW+++V+
Sbjct: 33  RSSVRFSQSSGLKIQPIRSSVSTSSCSKIIPRGGRVVCEAQNAAVEVAAVSDKTWKTLVV 92

Query: 87  ESDLPVLVEFWAPWCGPCRMIRPIIDELA 1
           ES +PVLVEFWAPWCGPCRMI P+IDELA
Sbjct: 93  ESTVPVLVEFWAPWCGPCRMIHPVIDELA 121


>gb|ABK96292.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 190

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 52/95 (54%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
 Frame = -3

Query: 267 RSSVNLPESRGLKILPTRAT------GXXXXXXXXXXXXXXXVCEAPEIAVVVPLVTDAT 106
           R S+ LP  +GLK+    +T                      VCEA E AV V  VTDAT
Sbjct: 35  RRSLRLPHVKGLKLSFNSSTINRSPGSFVTLTSSRLSRGGRIVCEAQETAVEVASVTDAT 94

Query: 105 WQSVVLESDLPVLVEFWAPWCGPCRMIRPIIDELA 1
           W+SVVLES+ PVLVEFWAPWCGPCRMI PIIDELA
Sbjct: 95  WKSVVLESESPVLVEFWAPWCGPCRMIHPIIDELA 129


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