BLASTX nr result

ID: Panax21_contig00023144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023144
         (1142 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632477.1| PREDICTED: uncharacterized protein LOC100854...   213   6e-53
ref|XP_002534099.1| ring finger protein, putative [Ricinus commu...   212   2e-52
emb|CAN61677.1| hypothetical protein VITISV_018326 [Vitis vinifera]   207   4e-51
ref|XP_002310548.1| predicted protein [Populus trichocarpa] gi|2...   204   4e-50
ref|XP_002522602.1| ring finger protein, putative [Ricinus commu...   193   6e-47

>ref|XP_003632477.1| PREDICTED: uncharacterized protein LOC100854068 [Vitis vinifera]
          Length = 372

 Score =  213 bits (543), Expect = 6e-53
 Identities = 117/245 (47%), Positives = 152/245 (62%), Gaps = 25/245 (10%)
 Frame = -3

Query: 702 FVILICFLIVFRKYR-LNR-RRTNSPNLDQANEEFINEDHGPEFIHPIWLINTIGLQQSV 529
           F ++ C  +V + Y   NR RR++ P  +  +E+FI+E+  P   HPIWLINT+GLQQSV
Sbjct: 49  FFVVSCCTVVLKYYSGWNRSRRSDPPVQNHTHEDFIDEEQSPVVYHPIWLINTVGLQQSV 108

Query: 528 IDSIEIFKYKKDQVLIEGTDCSVCLTEFQEDESLRLLPKCSHAFHIPCIDTWLRSHKNCP 349
           ID I + KY K++ LIEGT+CSVCL EF+EDESLRLLPKCSHAFH+PCIDTWLRSHKNCP
Sbjct: 109 IDLITVIKYNKEEGLIEGTECSVCLGEFEEDESLRLLPKCSHAFHVPCIDTWLRSHKNCP 168

Query: 348 VCRAPIXXXXXXXXXXXVERNLNGLRSREDNLAGNLENNVELGSDQVGEDGE-------- 193
           +CRAPI           VE++ N   SRED    N E +  LGS +VGE G         
Sbjct: 169 LCRAPIIHENVGSHLNAVEQDSNDSGSREDMEIDNSETHSGLGSSEVGEGGTAEVGVGVL 228

Query: 192 ---------------NIMGARNFDVRVQSDLADHIVKVEGELQQRRRLISMDSSSASMIH 58
                            M A  +++RV SDL D+    E +++  RR +SMD S+AS I+
Sbjct: 229 AVEEARTNEIVRKGLPYMNAGKYELRVLSDLVDNHRASEEQIEPVRRSVSMDLSAASEIY 288

Query: 57  FAVAD 43
            A+A+
Sbjct: 289 LAMAN 293


>ref|XP_002534099.1| ring finger protein, putative [Ricinus communis]
           gi|223525847|gb|EEF28281.1| ring finger protein,
           putative [Ricinus communis]
          Length = 344

 Score =  212 bits (539), Expect = 2e-52
 Identities = 126/258 (48%), Positives = 151/258 (58%), Gaps = 35/258 (13%)
 Frame = -3

Query: 708 GAFV---ILICFLIVFRKYR---LNRRRTNSPNLDQANEEFINEDHGPEFIHPIWLINTI 547
           G F+   IL+C L    + R     R R+  P +    E+F++ED GP+  HPIW INT+
Sbjct: 5   GGFIGAAILVCILATILRARNRISTRSRSLPPIIFATQEDFLDEDQGPQLDHPIWYINTV 64

Query: 546 GLQQSVIDSIEIFKYKKDQVLIEGTDCSVCLTEFQEDESLRLLPKCSHAFHIPCIDTWLR 367
           GLQQSVIDSI +FKYKKD+ LIEGT+CSVCL EFQEDESLRLLPKCSHAFHIPCIDTWLR
Sbjct: 65  GLQQSVIDSIAVFKYKKDEGLIEGTECSVCLNEFQEDESLRLLPKCSHAFHIPCIDTWLR 124

Query: 366 SHKNCPVCRAPIXXXXXXXXXXXVERNLNGLRSREDNLAGNLENNVEL--GSDQVGEDG- 196
           SHKNCP+CRAP+            E   + L S   +   N  NN  L   S+ VGEDG 
Sbjct: 125 SHKNCPLCRAPVISDNFDVQVELPESTSSDLSSTGGSQTENSTNNSGLITISNSVGEDGT 184

Query: 195 -----------------ENIMG----ARNFDV-----RVQSDLADHIVKVEGELQQRRRL 94
                            E I G      NF V     RVQSDL D  + ++ E+Q  RR 
Sbjct: 185 DEVRDGDDTNCALPIEDETIGGNSKTGLNFAVLGNHSRVQSDLVDTRLTIKAEMQPVRRS 244

Query: 93  ISMDSSSASMIHFAVADV 40
            S+DSSSA  I+ +V  V
Sbjct: 245 ASLDSSSAMAIYSSVGKV 262


>emb|CAN61677.1| hypothetical protein VITISV_018326 [Vitis vinifera]
          Length = 371

 Score =  207 bits (527), Expect = 4e-51
 Identities = 111/225 (49%), Positives = 141/225 (62%), Gaps = 23/225 (10%)
 Frame = -3

Query: 648 RRTNSPNLDQANEEFINEDHGPEFIHPIWLINTIGLQQSVIDSIEIFKYKKDQVLIEGTD 469
           RR++ P  +  +E+FI+E+  P   HPIWLINT+GLQQSVID I + KY K++ LIEGT+
Sbjct: 68  RRSDPPVQNHTHEDFIDEEQSPVVYHPIWLINTVGLQQSVIDLITVIKYNKEEGLIEGTE 127

Query: 468 CSVCLTEFQEDESLRLLPKCSHAFHIPCIDTWLRSHKNCPVCRAPIXXXXXXXXXXXVER 289
           CSVCL EF+EDESLRLLPKCSHAFH+PCIDTWLRSHKNCP+CRAPI           VE+
Sbjct: 128 CSVCLGEFEEDESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPIIHENVGSHLNAVEQ 187

Query: 288 NLNGLRSREDNLAGNLENNVELGSDQVGEDGE-----------------------NIMGA 178
           + N   SRED    N E +  LGS +VGE G                          M A
Sbjct: 188 DSNDSGSREDMEIDNSETHSGLGSSEVGEGGAAEVGVGVMAVEEARTNEIVRKGLPYMNA 247

Query: 177 RNFDVRVQSDLADHIVKVEGELQQRRRLISMDSSSASMIHFAVAD 43
             +++RV SDL D+    E +++  RR +SMD S+AS I  A+A+
Sbjct: 248 GKYELRVLSDLVDNHRASEEQIEPVRRSVSMDLSAASEICLAMAN 292


>ref|XP_002310548.1| predicted protein [Populus trichocarpa] gi|222853451|gb|EEE90998.1|
           predicted protein [Populus trichocarpa]
          Length = 395

 Score =  204 bits (518), Expect = 4e-50
 Identities = 115/260 (44%), Positives = 152/260 (58%), Gaps = 31/260 (11%)
 Frame = -3

Query: 693 LICFL--IVFRKYRLNRRRTNSPNLDQANEEFINEDHGPEFIHPIWLINTIGLQQSVIDS 520
           ++C +  + + +++ +RR  + P      E+F++ED G E  H IW IN +GLQQSVIDS
Sbjct: 70  ILCLVSRLCYNRHQNSRRSRSLPVFFGTQEDFLDEDQGTEINHHIWYINFLGLQQSVIDS 129

Query: 519 IEIFKYKKDQVLIEGTDCSVCLTEFQEDESLRLLPKCSHAFHIPCIDTWLRSHKNCPVCR 340
           I +F +KKD+ LI+GT+CSVCL+EFQE+ESLRLLPKCSHAFHIPCIDTWLRSHKNCP+CR
Sbjct: 130 ITVFNFKKDEGLIDGTECSVCLSEFQENESLRLLPKCSHAFHIPCIDTWLRSHKNCPLCR 189

Query: 339 APIXXXXXXXXXXXVERNLNGLRSREDNLAGNLENNVELG---SDQVGEDG--------E 193
           AP+                  L SRE+    N ENN+  G   S+  GEDG        E
Sbjct: 190 APVVSDNFDAQVALTVPTTGDLSSREEPQMENSENNIPSGLMSSNHAGEDGSGEVRNGEE 249

Query: 192 NIMGARNFD------------------VRVQSDLADHIVKVEGELQQRRRLISMDSSSAS 67
            I G    D                   R++SDL D +V VE E+Q  RR +S+D S+AS
Sbjct: 250 PICGLPVVDESNAGNSSLNSNHFISRNPRIRSDLVDKLVVVEEEMQPVRRSVSLDFSTAS 309

Query: 66  MIHFAVADVGDEAYLKKADS 7
            I+  +A+V        +DS
Sbjct: 310 AIYSVLANVAPGKCQANSDS 329


>ref|XP_002522602.1| ring finger protein, putative [Ricinus communis]
           gi|223538078|gb|EEF39689.1| ring finger protein,
           putative [Ricinus communis]
          Length = 378

 Score =  193 bits (491), Expect = 6e-47
 Identities = 108/228 (47%), Positives = 137/228 (60%), Gaps = 7/228 (3%)
 Frame = -3

Query: 702 FVILICFLIVFRKYRLNRRRTNSPNLDQANE----EFINEDHGPEFIHPIWLINTIGLQQ 535
           F ++ C+ I ++ Y  +RR  +S   DQ NE    EF++EDHGP   HP+W INTIGLQ 
Sbjct: 74  FFLVFCYAIYYKFYSGSRRGRSSQPQDQRNETTHEEFLDEDHGPILDHPVWYINTIGLQP 133

Query: 534 SVIDSIEIFKYKKDQVLIEGTDCSVCLTEFQEDESLRLLPKCSHAFHIPCIDTWLRSHKN 355
           SVI+SI + KYK+   L+EGTDCSVCL EF+EDE+LRLLPKCSHAFHIPCIDTWLRSH N
Sbjct: 134 SVINSISVCKYKRGDGLVEGTDCSVCLNEFEEDETLRLLPKCSHAFHIPCIDTWLRSHTN 193

Query: 354 CPVCRAPIXXXXXXXXXXXVERNLNGLRSREDNLAGNLENNVELGSDQVGEDGENIMG-- 181
           CP+CRAPI            E     L S E+   G  EN+ E   +  G DGE  +G  
Sbjct: 194 CPLCRAPI--VANSARATSSEGTSESLSSGEETRIGVSENDQESERELEGGDGELRVGIE 251

Query: 180 -ARNFDVRVQSDLADHIVKVEGELQQRRRLISMDSSSASMIHFAVADV 40
             R  +       ++ +   E  +Q  RR +S+DS SA  I  A+  V
Sbjct: 252 EEREVEDENTRKRSEFLNGEEEGIQPIRRSVSLDSLSAFKISQALVSV 299


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