BLASTX nr result
ID: Panax21_contig00023139
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00023139
(2286 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003633408.1| PREDICTED: cleavage and polyadenylation spec... 1257 0.0
emb|CAN71414.1| hypothetical protein VITISV_029216 [Vitis vinifera] 1250 0.0
ref|XP_002271646.2| PREDICTED: cleavage and polyadenylation spec... 1229 0.0
ref|XP_002323824.1| predicted protein [Populus trichocarpa] gi|2... 1196 0.0
ref|NP_176297.1| cleavage and polyadenylation specificity factor... 1181 0.0
>ref|XP_003633408.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like [Vitis vinifera]
Length = 694
Score = 1257 bits (3253), Expect = 0.0
Identities = 628/695 (90%), Positives = 657/695 (94%)
Frame = +1
Query: 97 MASTGQPVSSLKRRDSLPTRESDQLIITPLGAGSEVGRSCVYMTYKGKTILFDCGIHPAY 276
MASTG P SLKR DS TRE DQLIITPLGAG+EVGRSCVYM+YKGKTILFDCGIHPAY
Sbjct: 1 MASTGPP-QSLKRPDSSLTREGDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAY 59
Query: 277 SGMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLL 456
SGMAALPYFDEIDPSTIDVLL+THFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLL
Sbjct: 60 SGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLL 119
Query: 457 SDYVKVSKVSVEDMLFDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMV 636
SDYVKVSKVSVEDML+DEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMV
Sbjct: 120 SDYVKVSKVSVEDMLYDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMV 179
Query: 637 DIAGVRVLYTGDYSREEDRHLRAAELPQFSPDVCIIESTYGVQLHQSRHIREKRFTDVIH 816
DIAGVRVLYTGDYSREEDRHLRAAE+PQFSPD+CIIESTYGVQLHQ RH+REKRFTDVIH
Sbjct: 180 DIAGVRVLYTGDYSREEDRHLRAAEIPQFSPDICIIESTYGVQLHQPRHVREKRFTDVIH 239
Query: 817 STVAQGGRVLIPAFALGRAQELLLILDEYWSNHPELHNIPIYYASPLAKRCMAVYQTYIN 996
ST++QGGRVLIPAFALGRAQELLLILDEYWSNHPELHNIPIYYASPLAKRCMAVYQTYIN
Sbjct: 240 STISQGGRVLIPAFALGRAQELLLILDEYWSNHPELHNIPIYYASPLAKRCMAVYQTYIN 299
Query: 997 SMNERIRSQFANSNPFDFKHISPLKSIDNFEDVGPSVVMASPGGLQSGLSRQLFDKWCAD 1176
SMNERIR+QFANSNPFDFKHISPLKSI+NF DVGPSVVMASP GLQSGLSRQLFD WC+D
Sbjct: 300 SMNERIRNQFANSNPFDFKHISPLKSIENFNDVGPSVVMASPSGLQSGLSRQLFDMWCSD 359
Query: 1177 KKNSCVIPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLK 1356
KKN+CVIPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHAD+AQTSTFLK
Sbjct: 360 KKNACVIPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADFAQTSTFLK 419
Query: 1357 ELMPPNIILVHGEANEMGRLKQKLISLFADRNTKIVSPKNCQSVEMYFNSEKMAKTVGKL 1536
ELMPPNIILVHGEANEMGRLKQKLI+ FADRNTKI+SPKNCQSVEMYFNSEKMAKT+G+L
Sbjct: 420 ELMPPNIILVHGEANEMGRLKQKLITQFADRNTKIISPKNCQSVEMYFNSEKMAKTIGRL 479
Query: 1537 AEKTPEVGETVSGLLVKKGFSYQIMASEDLHVFSQLSTANVMQRISIPYTGAFGVIKHRL 1716
AEKTP VGETVSGLLVKKGF+YQIMA +DLHVFSQLSTANV QRI+IPYTGAFGVIKHRL
Sbjct: 480 AEKTPGVGETVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYTGAFGVIKHRL 539
Query: 1717 KQIYXXXXXXXXXXXGVPALRVHDRVTVKQESEKHISLHWTADPISDMVSDSVVALVLNA 1896
KQIY VPA RVH+RVTVK ESEKHISLHWT+DPISDMVSDS+VALVLN
Sbjct: 540 KQIYESVESLPDEESEVPAFRVHERVTVKHESEKHISLHWTSDPISDMVSDSIVALVLNI 599
Query: 1897 SREMPKVVVESEPIKDEVENEKKAEKIIHALLVSLFGDVKLGENGKLVITVDGNVAHLDK 2076
SRE+PKVVVESE IK E EN KKAEK+IHALLVSLFGDVKLGENG LVI+VDGNVAHLDK
Sbjct: 600 SREIPKVVVESEAIKTEEENGKKAEKVIHALLVSLFGDVKLGENGNLVISVDGNVAHLDK 659
Query: 2077 QSGDVESENSGLKERVRMAFQRIQTAVKPIPLSAS 2181
QSG+VESEN GLKERVR+AFQRIQ AVKPIPLS S
Sbjct: 660 QSGNVESENEGLKERVRVAFQRIQNAVKPIPLSVS 694
>emb|CAN71414.1| hypothetical protein VITISV_029216 [Vitis vinifera]
Length = 687
Score = 1250 bits (3235), Expect = 0.0
Identities = 622/686 (90%), Positives = 651/686 (94%)
Frame = +1
Query: 124 SLKRRDSLPTRESDQLIITPLGAGSEVGRSCVYMTYKGKTILFDCGIHPAYSGMAALPYF 303
SLKR DS TRE DQLIITPLGAG+EVGRSCVYM+YKGKTILFDCGIHPAYSGMAALPYF
Sbjct: 2 SLKRPDSSLTREGDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYF 61
Query: 304 DEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVSKV 483
DEIDPSTIDVLL+THFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVSKV
Sbjct: 62 DEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVSKV 121
Query: 484 SVEDMLFDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLY 663
SVEDML+DEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLY
Sbjct: 122 SVEDMLYDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLY 181
Query: 664 TGDYSREEDRHLRAAELPQFSPDVCIIESTYGVQLHQSRHIREKRFTDVIHSTVAQGGRV 843
TGDYSREEDRHLRAAE+PQFSPD+CIIESTYGVQLHQ RH+REKRFTDVIHST++QGGRV
Sbjct: 182 TGDYSREEDRHLRAAEIPQFSPDICIIESTYGVQLHQPRHVREKRFTDVIHSTISQGGRV 241
Query: 844 LIPAFALGRAQELLLILDEYWSNHPELHNIPIYYASPLAKRCMAVYQTYINSMNERIRSQ 1023
LIPAFALGRAQELLLILDEYWSNHPELHNIPIYYASPLAKRCMAVYQTYINSMNERIR+Q
Sbjct: 242 LIPAFALGRAQELLLILDEYWSNHPELHNIPIYYASPLAKRCMAVYQTYINSMNERIRNQ 301
Query: 1024 FANSNPFDFKHISPLKSIDNFEDVGPSVVMASPGGLQSGLSRQLFDKWCADKKNSCVIPG 1203
FANSNPFDFKHISPLKSI+NF DVGPSVVMASP GLQSGLSRQLFD WC+DKKN+CVIPG
Sbjct: 302 FANSNPFDFKHISPLKSIENFNDVGPSVVMASPSGLQSGLSRQLFDMWCSDKKNACVIPG 361
Query: 1204 YVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMPPNIIL 1383
YVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHAD+AQTSTFLKELMPPNIIL
Sbjct: 362 YVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADFAQTSTFLKELMPPNIIL 421
Query: 1384 VHGEANEMGRLKQKLISLFADRNTKIVSPKNCQSVEMYFNSEKMAKTVGKLAEKTPEVGE 1563
VHGEANEMGRLKQKLI+ FADRNTKI+SPKNCQSVEMYFNSEKMAKT+G+LAEKTP VGE
Sbjct: 422 VHGEANEMGRLKQKLITQFADRNTKIISPKNCQSVEMYFNSEKMAKTIGRLAEKTPGVGE 481
Query: 1564 TVSGLLVKKGFSYQIMASEDLHVFSQLSTANVMQRISIPYTGAFGVIKHRLKQIYXXXXX 1743
TVSGLLVKKGF+YQIMA +DLHVFSQLSTANV QRI+IPYTGAFGVIKHRLKQIY
Sbjct: 482 TVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYTGAFGVIKHRLKQIYESVES 541
Query: 1744 XXXXXXGVPALRVHDRVTVKQESEKHISLHWTADPISDMVSDSVVALVLNASREMPKVVV 1923
VPA RVH+RVTVK ESEKHISLHWT+DPISDMVSDS+VALVLN SRE+PKVVV
Sbjct: 542 LPDEESEVPAFRVHERVTVKHESEKHISLHWTSDPISDMVSDSIVALVLNISREIPKVVV 601
Query: 1924 ESEPIKDEVENEKKAEKIIHALLVSLFGDVKLGENGKLVITVDGNVAHLDKQSGDVESEN 2103
ESE IK E EN KKAEK+IHALLVSLFGDVKLGENG LVI+VDGNVAHLDKQSG+VESEN
Sbjct: 602 ESEAIKTEEENGKKAEKVIHALLVSLFGDVKLGENGNLVISVDGNVAHLDKQSGNVESEN 661
Query: 2104 SGLKERVRMAFQRIQTAVKPIPLSAS 2181
GLKERVR+AFQRIQ AVKPIPLS S
Sbjct: 662 EGLKERVRVAFQRIQNAVKPIPLSVS 687
>ref|XP_002271646.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like [Vitis vinifera]
Length = 693
Score = 1229 bits (3180), Expect = 0.0
Identities = 616/695 (88%), Positives = 649/695 (93%)
Frame = +1
Query: 97 MASTGQPVSSLKRRDSLPTRESDQLIITPLGAGSEVGRSCVYMTYKGKTILFDCGIHPAY 276
MASTG P SLKR DS TR DQLIITPLGAG+EVGRSCVYM+YKGKTILFDCGIHPAY
Sbjct: 1 MASTG-PSQSLKRPDSSLTR-GDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAY 58
Query: 277 SGMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLL 456
SGMAALPYFDEIDPSTIDVLL+THFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLL
Sbjct: 59 SGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLL 118
Query: 457 SDYVKVSKVSVEDMLFDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMV 636
SDYVKVSKVSVEDML+DEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMV
Sbjct: 119 SDYVKVSKVSVEDMLYDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMV 178
Query: 637 DIAGVRVLYTGDYSREEDRHLRAAELPQFSPDVCIIESTYGVQLHQSRHIREKRFTDVIH 816
DIAGVRVLYTGDYSREEDRHLRAAE+PQF PD+CIIESTYGVQLHQ RH+REKRFTDVIH
Sbjct: 179 DIAGVRVLYTGDYSREEDRHLRAAEIPQFCPDICIIESTYGVQLHQPRHVREKRFTDVIH 238
Query: 817 STVAQGGRVLIPAFALGRAQELLLILDEYWSNHPELHNIPIYYASPLAKRCMAVYQTYIN 996
ST++QGGRVLIPA+ALGRAQELLLILDEYWSNHPELHN+PIYYASPLAKRCMAVYQTYIN
Sbjct: 239 STISQGGRVLIPAYALGRAQELLLILDEYWSNHPELHNVPIYYASPLAKRCMAVYQTYIN 298
Query: 997 SMNERIRSQFANSNPFDFKHISPLKSIDNFEDVGPSVVMASPGGLQSGLSRQLFDKWCAD 1176
SMNERIR+QFANSNPFDFKHISPLKSI+NF DVGPSVVMASPGGLQSGLSRQLFD WC+D
Sbjct: 299 SMNERIRNQFANSNPFDFKHISPLKSIENFNDVGPSVVMASPGGLQSGLSRQLFDMWCSD 358
Query: 1177 KKNSCVIPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLK 1356
KKN+CVIPGYVV GTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHAD+AQTSTFLK
Sbjct: 359 KKNACVIPGYVVGGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADFAQTSTFLK 418
Query: 1357 ELMPPNIILVHGEANEMGRLKQKLISLFADRNTKIVSPKNCQSVEMYFNSEKMAKTVGKL 1536
ELMPPNIILVHGEANEMGRLKQKLI+ FAD NTKI+SPKNCQSVEMYFNSEKMAKT+G+L
Sbjct: 419 ELMPPNIILVHGEANEMGRLKQKLITQFADCNTKIISPKNCQSVEMYFNSEKMAKTIGRL 478
Query: 1537 AEKTPEVGETVSGLLVKKGFSYQIMASEDLHVFSQLSTANVMQRISIPYTGAFGVIKHRL 1716
AEKTPEVGETVSGLLVKKGF+YQIMA +DLHVF QLSTANV QRI+IPYTGAFGVIKHRL
Sbjct: 479 AEKTPEVGETVSGLLVKKGFTYQIMAPDDLHVFWQLSTANVTQRITIPYTGAFGVIKHRL 538
Query: 1717 KQIYXXXXXXXXXXXGVPALRVHDRVTVKQESEKHISLHWTADPISDMVSDSVVALVLNA 1896
KQIY VPA RVH+RVTVK +SEKHISLHWT+DPISDMVSDS+VALVLN
Sbjct: 539 KQIYESVESLPDEESEVPAFRVHERVTVKHDSEKHISLHWTSDPISDMVSDSIVALVLNI 598
Query: 1897 SREMPKVVVESEPIKDEVENEKKAEKIIHALLVSLFGDVKLGENGKLVITVDGNVAHLDK 2076
S E+PKV+VESE IK E EN KKAEK+IHALLVSLFGDVKL NG LVI+VDGNV HLDK
Sbjct: 599 SLEIPKVIVESEAIKTEEENGKKAEKVIHALLVSLFGDVKLEGNGNLVISVDGNVVHLDK 658
Query: 2077 QSGDVESENSGLKERVRMAFQRIQTAVKPIPLSAS 2181
QSG+VESEN GLKERVR+AFQRIQ AVKPIP S S
Sbjct: 659 QSGNVESENEGLKERVRVAFQRIQNAVKPIPPSVS 693
>ref|XP_002323824.1| predicted protein [Populus trichocarpa] gi|222866826|gb|EEF03957.1|
predicted protein [Populus trichocarpa]
Length = 699
Score = 1196 bits (3094), Expect = 0.0
Identities = 591/693 (85%), Positives = 645/693 (93%), Gaps = 1/693 (0%)
Frame = +1
Query: 97 MASTGQPVSSLKRRDSLPTRES-DQLIITPLGAGSEVGRSCVYMTYKGKTILFDCGIHPA 273
MASTGQ SLKRRD+ TRE DQL +TPLGAG+EVGRSCVYM++KGKT+LFDCGIHPA
Sbjct: 1 MASTGQS-QSLKRRDAPVTREGGDQLTLTPLGAGNEVGRSCVYMSFKGKTVLFDCGIHPA 59
Query: 274 YSGMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLL 453
YSGMAALPYFDEIDPSTIDVLL+THFHLDHAASLPYFLEKTTF+GRVFMTHATKAIYKLL
Sbjct: 60 YSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFRGRVFMTHATKAIYKLL 119
Query: 454 LSDYVKVSKVSVEDMLFDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFM 633
L+DYVKVSKVSVEDMLFDE+DI RSMDKIEVIDFHQT++VNGI+FWCYTAGHVLGAAMFM
Sbjct: 120 LTDYVKVSKVSVEDMLFDEKDINRSMDKIEVIDFHQTVDVNGIKFWCYTAGHVLGAAMFM 179
Query: 634 VDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDVCIIESTYGVQLHQSRHIREKRFTDVI 813
VDIAGVRVLYTGDYSREEDRHLRAAE+PQFSPD+CIIESTYGVQLHQ RHIREKRFTDVI
Sbjct: 180 VDIAGVRVLYTGDYSREEDRHLRAAEMPQFSPDICIIESTYGVQLHQPRHIREKRFTDVI 239
Query: 814 HSTVAQGGRVLIPAFALGRAQELLLILDEYWSNHPELHNIPIYYASPLAKRCMAVYQTYI 993
HST++ GGRVLIPAFALGRAQELLLILDEYWSNHPELHNIP+YYASPLAK+CM VYQTYI
Sbjct: 240 HSTISLGGRVLIPAFALGRAQELLLILDEYWSNHPELHNIPVYYASPLAKKCMTVYQTYI 299
Query: 994 NSMNERIRSQFANSNPFDFKHISPLKSIDNFEDVGPSVVMASPGGLQSGLSRQLFDKWCA 1173
SMNERIR+QFA+SNPF FKHISPL SI++F DVGPSVVMA+PGGLQSGLSRQLFD WC+
Sbjct: 300 LSMNERIRNQFADSNPFKFKHISPLNSIEDFTDVGPSVVMATPGGLQSGLSRQLFDMWCS 359
Query: 1174 DKKNSCVIPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFL 1353
DKKN+CVIPG++VEGTLAKTIINEPKEV LMNGLTAPLNMQVHYISFSAHADYAQTSTFL
Sbjct: 360 DKKNACVIPGFLVEGTLAKTIINEPKEVQLMNGLTAPLNMQVHYISFSAHADYAQTSTFL 419
Query: 1354 KELMPPNIILVHGEANEMGRLKQKLISLFADRNTKIVSPKNCQSVEMYFNSEKMAKTVGK 1533
KELMPPNIILVHGEANEMGRLKQKLI+ F D NTKI++PKNCQSVEMYFNSEKMAKT GK
Sbjct: 420 KELMPPNIILVHGEANEMGRLKQKLITEFTDGNTKIITPKNCQSVEMYFNSEKMAKTTGK 479
Query: 1534 LAEKTPEVGETVSGLLVKKGFSYQIMASEDLHVFSQLSTANVMQRISIPYTGAFGVIKHR 1713
LAE+TP+VGETVSG+LVKKGF+YQIMA EDLHVFSQLST N+ QRI+IP++GAFGVIKHR
Sbjct: 480 LAERTPDVGETVSGILVKKGFTYQIMAPEDLHVFSQLSTGNITQRITIPFSGAFGVIKHR 539
Query: 1714 LKQIYXXXXXXXXXXXGVPALRVHDRVTVKQESEKHISLHWTADPISDMVSDSVVALVLN 1893
L+QIY G P L+VH+ VTVKQES++HISLHWTADPISDMVSDS+VALVLN
Sbjct: 540 LEQIYESVESGTDEESGSPTLQVHELVTVKQESDRHISLHWTADPISDMVSDSIVALVLN 599
Query: 1894 ASREMPKVVVESEPIKDEVENEKKAEKIIHALLVSLFGDVKLGENGKLVITVDGNVAHLD 2073
SRE+PKV+VESE IK E ENEKKAEK+I+A LVSLFGDVKLGENGKLV+ VDGNVA LD
Sbjct: 600 ISREVPKVIVESEDIKSEEENEKKAEKVIYAFLVSLFGDVKLGENGKLVLRVDGNVAELD 659
Query: 2074 KQSGDVESENSGLKERVRMAFQRIQTAVKPIPL 2172
KQSGDVESEN GLKERVR AF+RI++AV+PIPL
Sbjct: 660 KQSGDVESENEGLKERVRTAFRRIRSAVRPIPL 692
>ref|NP_176297.1| cleavage and polyadenylation specificity factor subunit 3-I
[Arabidopsis thaliana] gi|30696512|ref|NP_849835.1|
cleavage and polyadenylation specificity factor subunit
3-I [Arabidopsis thaliana]
gi|79320389|ref|NP_001031215.1| cleavage and
polyadenylation specificity factor subunit 3-I
[Arabidopsis thaliana]
gi|75262219|sp|Q9C952.1|CPSF3_ARATH RecName:
Full=Cleavage and polyadenylation specificity factor
subunit 3-I; AltName: Full=Cleavage and polyadenylation
specificity factor 73 kDa subunit I; Short=AtCPSF73-I;
Short=CPSF 73 kDa subunit I
gi|12323330|gb|AAG51638.1|AC018908_4 putative cleavage
and polyadenylation specificity factor; 72745-70039
[Arabidopsis thaliana] gi|23297661|gb|AAN13003.1|
putative cleavage and polyadenylation specificity factor
[Arabidopsis thaliana] gi|24415578|gb|AAN41458.1|
putative cleavage and polyadenylation specificity factor
73 kDa subunit [Arabidopsis thaliana]
gi|222422865|dbj|BAH19419.1| AT1G61010 [Arabidopsis
thaliana] gi|222423059|dbj|BAH19511.1| AT1G61010
[Arabidopsis thaliana] gi|332195645|gb|AEE33766.1|
cleavage and polyadenylation specificity factor subunit
3-I [Arabidopsis thaliana] gi|332195646|gb|AEE33767.1|
cleavage and polyadenylation specificity factor subunit
3-I [Arabidopsis thaliana] gi|332195647|gb|AEE33768.1|
cleavage and polyadenylation specificity factor subunit
3-I [Arabidopsis thaliana]
Length = 693
Score = 1181 bits (3056), Expect = 0.0
Identities = 580/688 (84%), Positives = 645/688 (93%), Gaps = 1/688 (0%)
Frame = +1
Query: 121 SSLKRRDSLPTRESDQLIITPLGAGSEVGRSCVYMTYKGKTILFDCGIHPAYSGMAALPY 300
+SLKRR+ +R+ DQLI+TPLGAGSEVGRSCVYM+++GK ILFDCGIHPAYSGMAALPY
Sbjct: 6 TSLKRREQPISRDGDQLIVTPLGAGSEVGRSCVYMSFRGKNILFDCGIHPAYSGMAALPY 65
Query: 301 FDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVSK 480
FDEIDPS+IDVLLITHFH+DHAASLPYFLEKTTF GRVFMTHATKAIYKLLL+DYVKVSK
Sbjct: 66 FDEIDPSSIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDYVKVSK 125
Query: 481 VSVEDMLFDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVL 660
VSVEDMLFDEQDI +SMDKIEVIDFHQT+EVNGI+FWCYTAGHVLGAAMFMVDIAGVR+L
Sbjct: 126 VSVEDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRIL 185
Query: 661 YTGDYSREEDRHLRAAELPQFSPDVCIIESTYGVQLHQSRHIREKRFTDVIHSTVAQGGR 840
YTGDYSREEDRHLRAAELPQFSPD+CIIEST GVQLHQSRHIREKRFTDVIHSTVAQGGR
Sbjct: 186 YTGDYSREEDRHLRAAELPQFSPDICIIESTSGVQLHQSRHIREKRFTDVIHSTVAQGGR 245
Query: 841 VLIPAFALGRAQELLLILDEYWSNHPELHNIPIYYASPLAKRCMAVYQTYINSMNERIRS 1020
VLIPAFALGRAQELLLILDEYW+NHP+LHNIPIYYASPLAK+CMAVYQTYI SMN+RIR+
Sbjct: 246 VLIPAFALGRAQELLLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILSMNDRIRN 305
Query: 1021 QFANSNPFDFKHISPLKSIDNFEDVGPSVVMASPGGLQSGLSRQLFDKWCADKKNSCVIP 1200
QFANSNPF FKHISPL SID+F DVGPSVVMA+PGGLQSGLSRQLFD WC+DKKN+C+IP
Sbjct: 306 QFANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGLSRQLFDSWCSDKKNACIIP 365
Query: 1201 GYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMPPNII 1380
GY+VEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMPPNII
Sbjct: 366 GYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMPPNII 425
Query: 1381 LVHGEANEMGRLKQKLISLFADRNTKIVSPKNCQSVEMYFNSEKMAKTVGKLAEKTPEVG 1560
LVHGEANEM RLKQKL++ F D NTKI++PKNC+SVEMYFNSEK+AKT+G+LAEKTP+VG
Sbjct: 426 LVHGEANEMMRLKQKLLTEFPDGNTKIMTPKNCESVEMYFNSEKLAKTIGRLAEKTPDVG 485
Query: 1561 ETVSGLLVKKGFSYQIMASEDLHVFSQLSTANVMQRISIPYTGAFGVIKHRLKQIYXXXX 1740
+TVSG+LVKKGF+YQIMA ++LHVFSQLSTA V QRI+IP+ GAFGVIKHRL++I+
Sbjct: 486 DTVSGILVKKGFTYQIMAPDELHVFSQLSTATVTQRITIPFVGAFGVIKHRLEKIFESVE 545
Query: 1741 XXXXXXXGVPALRVHDRVTVKQESEKHISLHWTADPISDMVSDSVVALVLNASREMPKVV 1920
G+PAL+VH+RVTVKQESEKHISL W++DPISDMVSDS+VAL+LN SRE+PK+V
Sbjct: 546 FSTDEESGLPALKVHERVTVKQESEKHISLQWSSDPISDMVSDSIVALILNISREVPKIV 605
Query: 1921 VESE-PIKDEVENEKKAEKIIHALLVSLFGDVKLGENGKLVITVDGNVAHLDKQSGDVES 2097
+E E +K E EN KK EK+I+ALLVSLFGDVKLGENGKLVI VDGNVA LDK+SG+VES
Sbjct: 606 MEEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGENGKLVIRVDGNVAQLDKESGEVES 665
Query: 2098 ENSGLKERVRMAFQRIQTAVKPIPLSAS 2181
E+SGLKERVR+AF+RIQ+AVKPIPLSAS
Sbjct: 666 EHSGLKERVRVAFERIQSAVKPIPLSAS 693