BLASTX nr result

ID: Panax21_contig00023138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023138
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271475.2| PREDICTED: uncharacterized protein LOC100249...    73   3e-11
ref|XP_002533696.1| basic helix-loop-helix-containing protein, p...    73   3e-11
emb|CAN69972.1| hypothetical protein VITISV_001452 [Vitis vinifera]    71   1e-10
ref|NP_001234845.1| Prf interactor 30137 [Solanum lycopersicum] ...    67   1e-09
ref|XP_002309084.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09

>ref|XP_002271475.2| PREDICTED: uncharacterized protein LOC100249509 [Vitis vinifera]
           gi|297740322|emb|CBI30504.3| unnamed protein product
           [Vitis vinifera]
          Length = 720

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/68 (50%), Positives = 44/68 (64%)
 Frame = +2

Query: 125 MESTTLRQFLQTICCNSPWNYAVFWKLQHQTEMLLTLEDGYFHTPKQTNSTESIVDNICF 304
           ME++ LRQ L++ C NS W YAVFW+L+HQ  MLLT EDGY   P      ESI D+I  
Sbjct: 1   METSALRQLLKSFCNNSHWKYAVFWRLKHQNPMLLTWEDGYCDYPNPREPVESISDDIYL 60

Query: 305 KGSDEIFS 328
             +++I S
Sbjct: 61  NNANDISS 68


>ref|XP_002533696.1| basic helix-loop-helix-containing protein, putative [Ricinus
           communis] gi|223526407|gb|EEF28691.1| basic
           helix-loop-helix-containing protein, putative [Ricinus
           communis]
          Length = 740

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 32/68 (47%), Positives = 46/68 (67%)
 Frame = +2

Query: 125 MESTTLRQFLQTICCNSPWNYAVFWKLQHQTEMLLTLEDGYFHTPKQTNSTESIVDNICF 304
           M +T LRQ L+++C NS WNYAV WKL+H + M+LT EDGYF+  K      +I D++  
Sbjct: 1   MGATALRQLLKSLCSNSTWNYAVLWKLRHGSPMILTWEDGYFNYSKSRELVGTISDDVYG 60

Query: 305 KGSDEIFS 328
           KG+ ++ S
Sbjct: 61  KGASDLIS 68


>emb|CAN69972.1| hypothetical protein VITISV_001452 [Vitis vinifera]
          Length = 708

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/68 (48%), Positives = 43/68 (63%)
 Frame = +2

Query: 125 MESTTLRQFLQTICCNSPWNYAVFWKLQHQTEMLLTLEDGYFHTPKQTNSTESIVDNICF 304
           ME++ LRQ L++ C NS W YAVFW+L+HQ  MLLT EDGY   P      ESI D+I  
Sbjct: 1   METSALRQLLKSFCNNSHWKYAVFWRLKHQNPMLLTWEDGYCDYPNPREPVESISDDIYL 60

Query: 305 KGSDEIFS 328
             +++  S
Sbjct: 61  NNANDXSS 68


>ref|NP_001234845.1| Prf interactor 30137 [Solanum lycopersicum]
           gi|56157408|gb|AAV80420.1| Prf interactor 30137 [Solanum
           lycopersicum]
          Length = 740

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 27/45 (60%), Positives = 34/45 (75%)
 Frame = +2

Query: 125 MESTTLRQFLQTICCNSPWNYAVFWKLQHQTEMLLTLEDGYFHTP 259
           M + +LR FL+++C  SPWNYAVFWKLQHQ  ++LT EDGY   P
Sbjct: 1   MSAASLRHFLESLCFKSPWNYAVFWKLQHQCPIILTWEDGYLDVP 45


>ref|XP_002309084.1| predicted protein [Populus trichocarpa] gi|222855060|gb|EEE92607.1|
           predicted protein [Populus trichocarpa]
          Length = 708

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/69 (42%), Positives = 45/69 (65%)
 Frame = +2

Query: 125 MESTTLRQFLQTICCNSPWNYAVFWKLQHQTEMLLTLEDGYFHTPKQTNSTESIVDNICF 304
           M +T LRQ L+++C NS W YAV WK+++ + M+LT EDGYF  PK     ++I  ++  
Sbjct: 1   MGTTDLRQLLESLCNNSDWKYAVLWKMRYGSPMILTWEDGYFDCPKPREPLQTISSDVYC 60

Query: 305 KGSDEIFSS 331
            G +++ SS
Sbjct: 61  NGGNDLASS 69


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