BLASTX nr result

ID: Panax21_contig00023132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023132
         (894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632504.1| PREDICTED: cyclin-D5-1-like [Vitis vinifera]       77   7e-12
emb|CBI33697.3| unnamed protein product [Vitis vinifera]               77   7e-12
emb|CAN71643.1| hypothetical protein VITISV_004104 [Vitis vinifera]    77   7e-12
ref|XP_002303399.1| predicted protein [Populus trichocarpa] gi|1...    67   6e-09
gb|AEV41136.1| D5-type cyclin [Populus x canadensis]                   65   2e-08

>ref|XP_003632504.1| PREDICTED: cyclin-D5-1-like [Vitis vinifera]
          Length = 270

 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 38/55 (69%), Positives = 43/55 (78%)
 Frame = +1

Query: 289 AATAVLAASDDQLTRTTMEFKINVIPSWGSSEKDHMFSCYNLLVEIEMEKSKTPK 453
           AA AVLAA D QLTR TM+ K++VI  WGS E +H+FSCY LL EIEM KSKTPK
Sbjct: 166 AAAAVLAAFDGQLTRKTMDCKMSVISLWGSRENEHIFSCYRLLQEIEMGKSKTPK 220


>emb|CBI33697.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 38/55 (69%), Positives = 43/55 (78%)
 Frame = +1

Query: 289 AATAVLAASDDQLTRTTMEFKINVIPSWGSSEKDHMFSCYNLLVEIEMEKSKTPK 453
           AA AVLAA D QLTR TM+ K++VI  WGS E +H+FSCY LL EIEM KSKTPK
Sbjct: 226 AAAAVLAAFDGQLTRKTMDCKMSVISLWGSRENEHIFSCYRLLQEIEMGKSKTPK 280


>emb|CAN71643.1| hypothetical protein VITISV_004104 [Vitis vinifera]
          Length = 194

 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 38/55 (69%), Positives = 43/55 (78%)
 Frame = +1

Query: 289 AATAVLAASDDQLTRTTMEFKINVIPSWGSSEKDHMFSCYNLLVEIEMEKSKTPK 453
           AA AVLAA D QLTR TM+ K++VI  WGS E +H+FSCY LL EIEM KSKTPK
Sbjct: 90  AAAAVLAAFDGQLTRKTMDCKMSVISLWGSRENEHIFSCYRLLQEIEMGKSKTPK 144


>ref|XP_002303399.1| predicted protein [Populus trichocarpa]
           gi|159025723|emb|CAN88862.1| D5-type cyclin [Populus
           trichocarpa] gi|222840831|gb|EEE78378.1| predicted
           protein [Populus trichocarpa]
          Length = 337

 Score = 67.0 bits (162), Expect = 6e-09
 Identities = 32/55 (58%), Positives = 43/55 (78%)
 Frame = +1

Query: 289 AATAVLAASDDQLTRTTMEFKINVIPSWGSSEKDHMFSCYNLLVEIEMEKSKTPK 453
           AA AVLAAS+ QLTR  +E K+++I SWGS E +++FSCY  + EIEM K+KTP+
Sbjct: 233 AAAAVLAASNRQLTRKELELKMDMISSWGSLENENVFSCYIAMQEIEMGKAKTPR 287


>gb|AEV41136.1| D5-type cyclin [Populus x canadensis]
          Length = 337

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 31/55 (56%), Positives = 43/55 (78%)
 Frame = +1

Query: 289 AATAVLAASDDQLTRTTMEFKINVIPSWGSSEKDHMFSCYNLLVEIEMEKSKTPK 453
           AA AVLAAS+ +LTR  +E K+++I SWGS E +++FSCY  + EIEM K+KTP+
Sbjct: 233 AAAAVLAASNRKLTRKELELKMDMISSWGSLENENVFSCYIAMQEIEMGKAKTPR 287


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