BLASTX nr result

ID: Panax21_contig00023131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023131
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261...   189   3e-46
gb|ABK96450.1| unknown [Populus trichocarpa x Populus deltoides]      188   4e-46
emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera]   187   1e-45
ref|XP_002312464.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
ref|XP_002526000.1| cleavage and polyadenylation specificity fac...   181   5e-44

>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
          Length = 2299

 Score =  189 bits (479), Expect = 3e-46
 Identities = 90/143 (62%), Positives = 106/143 (74%), Gaps = 4/143 (2%)
 Frame = +3

Query: 3    DWGYSKPVVALDMLWNLVFVVASVAMLICAAKEWPVVPLRVWICVYAGQCLVHVVLVWME 182
            DWGYSKPVVALDM+WN+ FV+ S+ MLIC A+E P  P+R+WIC YA QC VHVVLVW+E
Sbjct: 2006 DWGYSKPVVALDMMWNMSFVIVSIVMLICTARERPNTPIRLWICGYALQCGVHVVLVWLE 2065

Query: 183  YRRRNMRRVVDVE----ANYHYLDQSQDEDEEERVSVSGITNRSGFAKKCEYVNTMVSFI 350
            YRRRN RRV D E      +   D +  EDE+   S SG  N+S   K+CE VNTM SF+
Sbjct: 2066 YRRRNRRRVRDEEQQQQPQHSDSDVNDSEDEDGNSSASGGFNQSSVTKRCESVNTMASFL 2125

Query: 351  WWMVGFYWVVSGGEILLQSAPRL 419
            WW+VGFYWVVSGGE LLQ+APRL
Sbjct: 2126 WWIVGFYWVVSGGEALLQNAPRL 2148


>gb|ABK96450.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 218

 Score =  188 bits (477), Expect = 4e-46
 Identities = 88/142 (61%), Positives = 108/142 (76%), Gaps = 3/142 (2%)
 Frame = +3

Query: 3   DWGYSKPVVALDMLWNLVFVVASVAMLICAAKEWPVVPLRVWICVYAGQCLVHVVLVWME 182
           DWGYSKPVV+LDM+WN  FVV SV ML+   KE P  P+R+WIC YA QCLVHVVLVW+E
Sbjct: 60  DWGYSKPVVSLDMMWNAAFVVVSVTMLLVTVKERPNTPIRIWICGYALQCLVHVVLVWLE 119

Query: 183 YRRRNMRRVVDVEANYHYLDQS---QDEDEEERVSVSGITNRSGFAKKCEYVNTMVSFIW 353
           YRRRN RR  D+E+     ++    + +DE++R S   I+ RS   K+CE VNTMVSF+W
Sbjct: 120 YRRRNTRRERDIESQQQSTEEENVPESDDEDDRASF--ISPRSSVTKRCESVNTMVSFLW 177

Query: 354 WMVGFYWVVSGGEILLQSAPRL 419
           WMVGFYWVVSGG++LLQ+APRL
Sbjct: 178 WMVGFYWVVSGGDVLLQNAPRL 199


>emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera]
          Length = 361

 Score =  187 bits (474), Expect = 1e-45
 Identities = 89/143 (62%), Positives = 106/143 (74%), Gaps = 4/143 (2%)
 Frame = +3

Query: 3   DWGYSKPVVALDMLWNLVFVVASVAMLICAAKEWPVVPLRVWICVYAGQCLVHVVLVWME 182
           DWGYSKPVVALDM+WN+ FV+ S+ MLIC A+E P  P+R+WIC YA QC VHVVLVW+E
Sbjct: 62  DWGYSKPVVALDMMWNMSFVIVSIVMLICTARERPNTPIRLWICGYALQCGVHVVLVWLE 121

Query: 183 YRRRNMRRVVDVE----ANYHYLDQSQDEDEEERVSVSGITNRSGFAKKCEYVNTMVSFI 350
           YRRR+ RRV D E      +   D +  EDE+   S SG  N+S   K+CE VNTM SF+
Sbjct: 122 YRRRSRRRVRDEEQQQQPQHSDSDVNDSEDEDGNSSASGGFNQSSVTKRCESVNTMASFL 181

Query: 351 WWMVGFYWVVSGGEILLQSAPRL 419
           WW+VGFYWVVSGGE LLQ+APRL
Sbjct: 182 WWIVGFYWVVSGGEALLQNAPRL 204


>ref|XP_002312464.1| predicted protein [Populus trichocarpa] gi|222852284|gb|EEE89831.1|
           predicted protein [Populus trichocarpa]
          Length = 351

 Score =  186 bits (471), Expect = 2e-45
 Identities = 87/140 (62%), Positives = 104/140 (74%), Gaps = 1/140 (0%)
 Frame = +3

Query: 3   DWGYSKPVVALDMLWNLVFVVASVAMLICAAKEWPVVPLRVWICVYAGQCLVHVVLVWME 182
           DWGYSKPVV+LDM+WN  FVV SV ML+   KE P  P+R+WIC YA QCLVHVVLVW+E
Sbjct: 60  DWGYSKPVVSLDMMWNAAFVVVSVTMLLVTVKERPNTPIRIWICGYALQCLVHVVLVWLE 119

Query: 183 YRRRNMRRVVDVEANYHYLDQSQ-DEDEEERVSVSGITNRSGFAKKCEYVNTMVSFIWWM 359
           YRRRN RR  D+E+     ++    E +EE    S I+ RS   K+CE VNTMVSF+WWM
Sbjct: 120 YRRRNTRRERDIESQQQSTEEENVPESDEEDDRASFISPRSSVTKRCESVNTMVSFLWWM 179

Query: 360 VGFYWVVSGGEILLQSAPRL 419
           VGFYWVVSGG++LLQ+AP L
Sbjct: 180 VGFYWVVSGGDVLLQNAPHL 199


>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
            communis] gi|223534732|gb|EEF36424.1| cleavage and
            polyadenylation specificity factor, putative [Ricinus
            communis]
          Length = 963

 Score =  181 bits (459), Expect = 5e-44
 Identities = 91/155 (58%), Positives = 106/155 (68%), Gaps = 16/155 (10%)
 Frame = +3

Query: 3    DWGYSKPVVALDMLWNLVFVVASVAMLICAAKEWPVVPLRVWICVYAGQCLVHVVLVWME 182
            DWGYSKPVVALDM+WN  FVV S+ MLI + KE P  P+R+WIC YA QCLVHVVLVW+E
Sbjct: 659  DWGYSKPVVALDMVWNTAFVVVSITMLILSVKEKPNTPIRIWICGYALQCLVHVVLVWIE 718

Query: 183  YRRRNMRRVVDVEANYHYLDQ----------------SQDEDEEERVSVSGITNRSGFAK 314
            YRRRN RRV D E       Q                S+DED  +R SV+  +NRS   K
Sbjct: 719  YRRRNSRRVRDEERQQQQQQQAEVEGQHEENEGENVDSEDEDGVDRASVT--SNRSSVIK 776

Query: 315  KCEYVNTMVSFIWWMVGFYWVVSGGEILLQSAPRL 419
            +CE VNTM SF+WW+VGFYWVVSGG+ LLQ+AP L
Sbjct: 777  RCESVNTMASFLWWIVGFYWVVSGGDELLQNAPHL 811


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