BLASTX nr result
ID: Panax21_contig00023131
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00023131 (421 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261... 189 3e-46 gb|ABK96450.1| unknown [Populus trichocarpa x Populus deltoides] 188 4e-46 emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera] 187 1e-45 ref|XP_002312464.1| predicted protein [Populus trichocarpa] gi|2... 186 2e-45 ref|XP_002526000.1| cleavage and polyadenylation specificity fac... 181 5e-44 >ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera] Length = 2299 Score = 189 bits (479), Expect = 3e-46 Identities = 90/143 (62%), Positives = 106/143 (74%), Gaps = 4/143 (2%) Frame = +3 Query: 3 DWGYSKPVVALDMLWNLVFVVASVAMLICAAKEWPVVPLRVWICVYAGQCLVHVVLVWME 182 DWGYSKPVVALDM+WN+ FV+ S+ MLIC A+E P P+R+WIC YA QC VHVVLVW+E Sbjct: 2006 DWGYSKPVVALDMMWNMSFVIVSIVMLICTARERPNTPIRLWICGYALQCGVHVVLVWLE 2065 Query: 183 YRRRNMRRVVDVE----ANYHYLDQSQDEDEEERVSVSGITNRSGFAKKCEYVNTMVSFI 350 YRRRN RRV D E + D + EDE+ S SG N+S K+CE VNTM SF+ Sbjct: 2066 YRRRNRRRVRDEEQQQQPQHSDSDVNDSEDEDGNSSASGGFNQSSVTKRCESVNTMASFL 2125 Query: 351 WWMVGFYWVVSGGEILLQSAPRL 419 WW+VGFYWVVSGGE LLQ+APRL Sbjct: 2126 WWIVGFYWVVSGGEALLQNAPRL 2148 >gb|ABK96450.1| unknown [Populus trichocarpa x Populus deltoides] Length = 218 Score = 188 bits (477), Expect = 4e-46 Identities = 88/142 (61%), Positives = 108/142 (76%), Gaps = 3/142 (2%) Frame = +3 Query: 3 DWGYSKPVVALDMLWNLVFVVASVAMLICAAKEWPVVPLRVWICVYAGQCLVHVVLVWME 182 DWGYSKPVV+LDM+WN FVV SV ML+ KE P P+R+WIC YA QCLVHVVLVW+E Sbjct: 60 DWGYSKPVVSLDMMWNAAFVVVSVTMLLVTVKERPNTPIRIWICGYALQCLVHVVLVWLE 119 Query: 183 YRRRNMRRVVDVEANYHYLDQS---QDEDEEERVSVSGITNRSGFAKKCEYVNTMVSFIW 353 YRRRN RR D+E+ ++ + +DE++R S I+ RS K+CE VNTMVSF+W Sbjct: 120 YRRRNTRRERDIESQQQSTEEENVPESDDEDDRASF--ISPRSSVTKRCESVNTMVSFLW 177 Query: 354 WMVGFYWVVSGGEILLQSAPRL 419 WMVGFYWVVSGG++LLQ+APRL Sbjct: 178 WMVGFYWVVSGGDVLLQNAPRL 199 >emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera] Length = 361 Score = 187 bits (474), Expect = 1e-45 Identities = 89/143 (62%), Positives = 106/143 (74%), Gaps = 4/143 (2%) Frame = +3 Query: 3 DWGYSKPVVALDMLWNLVFVVASVAMLICAAKEWPVVPLRVWICVYAGQCLVHVVLVWME 182 DWGYSKPVVALDM+WN+ FV+ S+ MLIC A+E P P+R+WIC YA QC VHVVLVW+E Sbjct: 62 DWGYSKPVVALDMMWNMSFVIVSIVMLICTARERPNTPIRLWICGYALQCGVHVVLVWLE 121 Query: 183 YRRRNMRRVVDVE----ANYHYLDQSQDEDEEERVSVSGITNRSGFAKKCEYVNTMVSFI 350 YRRR+ RRV D E + D + EDE+ S SG N+S K+CE VNTM SF+ Sbjct: 122 YRRRSRRRVRDEEQQQQPQHSDSDVNDSEDEDGNSSASGGFNQSSVTKRCESVNTMASFL 181 Query: 351 WWMVGFYWVVSGGEILLQSAPRL 419 WW+VGFYWVVSGGE LLQ+APRL Sbjct: 182 WWIVGFYWVVSGGEALLQNAPRL 204 >ref|XP_002312464.1| predicted protein [Populus trichocarpa] gi|222852284|gb|EEE89831.1| predicted protein [Populus trichocarpa] Length = 351 Score = 186 bits (471), Expect = 2e-45 Identities = 87/140 (62%), Positives = 104/140 (74%), Gaps = 1/140 (0%) Frame = +3 Query: 3 DWGYSKPVVALDMLWNLVFVVASVAMLICAAKEWPVVPLRVWICVYAGQCLVHVVLVWME 182 DWGYSKPVV+LDM+WN FVV SV ML+ KE P P+R+WIC YA QCLVHVVLVW+E Sbjct: 60 DWGYSKPVVSLDMMWNAAFVVVSVTMLLVTVKERPNTPIRIWICGYALQCLVHVVLVWLE 119 Query: 183 YRRRNMRRVVDVEANYHYLDQSQ-DEDEEERVSVSGITNRSGFAKKCEYVNTMVSFIWWM 359 YRRRN RR D+E+ ++ E +EE S I+ RS K+CE VNTMVSF+WWM Sbjct: 120 YRRRNTRRERDIESQQQSTEEENVPESDEEDDRASFISPRSSVTKRCESVNTMVSFLWWM 179 Query: 360 VGFYWVVSGGEILLQSAPRL 419 VGFYWVVSGG++LLQ+AP L Sbjct: 180 VGFYWVVSGGDVLLQNAPHL 199 >ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus communis] gi|223534732|gb|EEF36424.1| cleavage and polyadenylation specificity factor, putative [Ricinus communis] Length = 963 Score = 181 bits (459), Expect = 5e-44 Identities = 91/155 (58%), Positives = 106/155 (68%), Gaps = 16/155 (10%) Frame = +3 Query: 3 DWGYSKPVVALDMLWNLVFVVASVAMLICAAKEWPVVPLRVWICVYAGQCLVHVVLVWME 182 DWGYSKPVVALDM+WN FVV S+ MLI + KE P P+R+WIC YA QCLVHVVLVW+E Sbjct: 659 DWGYSKPVVALDMVWNTAFVVVSITMLILSVKEKPNTPIRIWICGYALQCLVHVVLVWIE 718 Query: 183 YRRRNMRRVVDVEANYHYLDQ----------------SQDEDEEERVSVSGITNRSGFAK 314 YRRRN RRV D E Q S+DED +R SV+ +NRS K Sbjct: 719 YRRRNSRRVRDEERQQQQQQQAEVEGQHEENEGENVDSEDEDGVDRASVT--SNRSSVIK 776 Query: 315 KCEYVNTMVSFIWWMVGFYWVVSGGEILLQSAPRL 419 +CE VNTM SF+WW+VGFYWVVSGG+ LLQ+AP L Sbjct: 777 RCESVNTMASFLWWIVGFYWVVSGGDELLQNAPHL 811