BLASTX nr result

ID: Panax21_contig00023122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023122
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77253.1| unknown [Picea sitchensis]                             104   9e-21
ref|XP_003593323.1| RMD5-like protein [Medicago truncatula] gi|3...   102   2e-20
gb|ABN05733.1| Zinc finger, RING-type [Medicago truncatula]           102   2e-20
ref|XP_002264694.1| PREDICTED: protein RMD5 homolog A isoform 1 ...   102   3e-20
emb|CAN68476.1| hypothetical protein VITISV_029625 [Vitis vinifera]   102   3e-20

>gb|ADE77253.1| unknown [Picea sitchensis]
          Length = 384

 Score =  104 bits (259), Expect = 9e-21
 Identities = 44/58 (75%), Positives = 52/58 (89%)
 Frame = -1

Query: 381 IFVCPVSRDQSSDENPPMLLPCGHVLCTQSIAKLSKNGTRSFKCPYCPDVASISQCRQ 208
           IF CPVSRDQS++ENPPML+PCGHVLC QSI KLSK+ TR+FKCPYCP  A+++QCRQ
Sbjct: 324 IFACPVSRDQSTEENPPMLMPCGHVLCKQSIVKLSKSNTRTFKCPYCPLEATVAQCRQ 381


>ref|XP_003593323.1| RMD5-like protein [Medicago truncatula] gi|355482371|gb|AES63574.1|
           RMD5-like protein [Medicago truncatula]
          Length = 387

 Score =  102 bits (255), Expect = 2e-20
 Identities = 45/58 (77%), Positives = 50/58 (86%)
 Frame = -1

Query: 381 IFVCPVSRDQSSDENPPMLLPCGHVLCTQSIAKLSKNGTRSFKCPYCPDVASISQCRQ 208
           IFVCPVSRDQ S+ENPPMLLPC HVLC QSI KLSKN TR+FKCPYCP  A+++ CRQ
Sbjct: 327 IFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSKNSTRTFKCPYCPAEATVAHCRQ 384


>gb|ABN05733.1| Zinc finger, RING-type [Medicago truncatula]
          Length = 166

 Score =  102 bits (255), Expect = 2e-20
 Identities = 45/58 (77%), Positives = 50/58 (86%)
 Frame = -1

Query: 381 IFVCPVSRDQSSDENPPMLLPCGHVLCTQSIAKLSKNGTRSFKCPYCPDVASISQCRQ 208
           IFVCPVSRDQ S+ENPPMLLPC HVLC QSI KLSKN TR+FKCPYCP  A+++ CRQ
Sbjct: 106 IFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSKNSTRTFKCPYCPAEATVAHCRQ 163


>ref|XP_002264694.1| PREDICTED: protein RMD5 homolog A isoform 1 [Vitis vinifera]
           gi|359475593|ref|XP_003631711.1| PREDICTED: protein RMD5
           homolog A isoform 2 [Vitis vinifera]
           gi|296088090|emb|CBI35449.3| unnamed protein product
           [Vitis vinifera]
          Length = 383

 Score =  102 bits (254), Expect = 3e-20
 Identities = 43/58 (74%), Positives = 50/58 (86%)
 Frame = -1

Query: 381 IFVCPVSRDQSSDENPPMLLPCGHVLCTQSIAKLSKNGTRSFKCPYCPDVASISQCRQ 208
           IFVCPVSRDQ S+ENPPML+PCGHVLC QSI KLSK+ TR FKCPYCP+ +++ QC Q
Sbjct: 323 IFVCPVSRDQGSEENPPMLMPCGHVLCKQSIMKLSKSSTRMFKCPYCPNESTVGQCMQ 380


>emb|CAN68476.1| hypothetical protein VITISV_029625 [Vitis vinifera]
          Length = 153

 Score =  102 bits (254), Expect = 3e-20
 Identities = 43/58 (74%), Positives = 50/58 (86%)
 Frame = -1

Query: 381 IFVCPVSRDQSSDENPPMLLPCGHVLCTQSIAKLSKNGTRSFKCPYCPDVASISQCRQ 208
           IFVCPVSRDQ S+ENPPML+PCGHVLC QSI KLSK+ TR FKCPYCP+ +++ QC Q
Sbjct: 93  IFVCPVSRDQGSEENPPMLMPCGHVLCKQSIMKLSKSSTRMFKCPYCPNESTVGQCTQ 150


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