BLASTX nr result

ID: Panax21_contig00023082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023082
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284579.1| PREDICTED: uncharacterized protein LOC100252...   148   5e-34
gb|ABK93118.1| unknown [Populus trichocarpa] gi|118483290|gb|ABK...   130   1e-28
ref|XP_002329360.1| predicted protein [Populus trichocarpa] gi|1...   129   2e-28
gb|AFK39668.1| unknown [Medicago truncatula]                          127   9e-28
ref|XP_002278870.1| PREDICTED: uncharacterized protein LOC100249...   125   5e-27

>ref|XP_002284579.1| PREDICTED: uncharacterized protein LOC100252136 [Vitis vinifera]
           gi|302143071|emb|CBI20366.3| unnamed protein product
           [Vitis vinifera]
          Length = 98

 Score =  148 bits (373), Expect = 5e-34
 Identities = 72/101 (71%), Positives = 79/101 (78%)
 Frame = +3

Query: 60  MAAWTAATRQATNLACLSTPILAATSTRAANLIHRRGLSGGGDHHGPPKVNLWEDPLSPS 239
           MAAWTA  RQA NL  LS+P   ATS     LIHRRGL+ GGDHHGPPKVN W+DPLSPS
Sbjct: 1   MAAWTAVARQAGNLTRLSSPAPLATS-----LIHRRGLASGGDHHGPPKVNFWQDPLSPS 55

Query: 240 RWKEEHFVIASLTGWGLLIFGGYKLFAGGKKDNKEVVKVGE 362
           +WKEEHFVI SL+GWGLL +GGYK F  GKKDNKE  KVG+
Sbjct: 56  KWKEEHFVIVSLSGWGLLFYGGYKFFTKGKKDNKE-EKVGD 95


>gb|ABK93118.1| unknown [Populus trichocarpa] gi|118483290|gb|ABK93547.1| unknown
           [Populus trichocarpa]
          Length = 100

 Score =  130 bits (326), Expect = 1e-28
 Identities = 60/97 (61%), Positives = 76/97 (78%)
 Frame = +3

Query: 54  ATMAAWTAATRQATNLACLSTPILAATSTRAANLIHRRGLSGGGDHHGPPKVNLWEDPLS 233
           AT+AA  AA RQA  L+ +S+P    T  +AA LIHRRGL+G  DHHGPP++N W+DP+S
Sbjct: 2   ATLAA--AAARQAVTLSRISSP---KTPAQAAALIHRRGLAGAADHHGPPRINCWQDPMS 56

Query: 234 PSRWKEEHFVIASLTGWGLLIFGGYKLFAGGKKDNKE 344
           PS+WKEEHFVI SL+GWG+LI+GGYK F GGK + +E
Sbjct: 57  PSKWKEEHFVIVSLSGWGVLIYGGYKFFTGGKSNKEE 93


>ref|XP_002329360.1| predicted protein [Populus trichocarpa] gi|118481328|gb|ABK92607.1|
           unknown [Populus trichocarpa]
           gi|118481455|gb|ABK92670.1| unknown [Populus
           trichocarpa] gi|118483232|gb|ABK93519.1| unknown
           [Populus trichocarpa] gi|222870410|gb|EEF07541.1|
           predicted protein [Populus trichocarpa]
          Length = 100

 Score =  129 bits (325), Expect = 2e-28
 Identities = 60/97 (61%), Positives = 76/97 (78%)
 Frame = +3

Query: 54  ATMAAWTAATRQATNLACLSTPILAATSTRAANLIHRRGLSGGGDHHGPPKVNLWEDPLS 233
           AT+AA  AA RQA  L+ +S+P    T  +AA LIHRRGL+G  DHHGPP++N W+DP+S
Sbjct: 2   ATLAA--AAARQAVTLSRVSSP---KTPAQAAALIHRRGLAGAADHHGPPRINCWQDPMS 56

Query: 234 PSRWKEEHFVIASLTGWGLLIFGGYKLFAGGKKDNKE 344
           PS+WKEEHFVI SL+GWG+LI+GGYK F GGK + +E
Sbjct: 57  PSKWKEEHFVIVSLSGWGVLIYGGYKFFTGGKSNKEE 93


>gb|AFK39668.1| unknown [Medicago truncatula]
          Length = 94

 Score =  127 bits (319), Expect = 9e-28
 Identities = 57/94 (60%), Positives = 71/94 (75%)
 Frame = +3

Query: 60  MAAWTAATRQATNLACLSTPILAATSTRAANLIHRRGLSGGGDHHGPPKVNLWEDPLSPS 239
           MAAWTA  RQ+ N+  LS+P       ++A+ +HRRG++G  D HG PKVN+W+DPLSPS
Sbjct: 1   MAAWTAVARQSMNIGRLSSP-------KSASPVHRRGMAGSADPHGTPKVNIWQDPLSPS 53

Query: 240 RWKEEHFVIASLTGWGLLIFGGYKLFAGGKKDNK 341
           +WKEEHFVIASLTGW LL + GYK F GGKK+ K
Sbjct: 54  KWKEEHFVIASLTGWTLLFYSGYKFFTGGKKEEK 87


>ref|XP_002278870.1| PREDICTED: uncharacterized protein LOC100249870 isoform 1 [Vitis
           vinifera] gi|359485558|ref|XP_003633290.1| PREDICTED:
           uncharacterized protein LOC100249870 isoform 2 [Vitis
           vinifera] gi|297739274|emb|CBI28925.3| unnamed protein
           product [Vitis vinifera]
          Length = 100

 Score =  125 bits (313), Expect = 5e-27
 Identities = 58/90 (64%), Positives = 69/90 (76%)
 Frame = +3

Query: 75  AATRQATNLACLSTPILAATSTRAANLIHRRGLSGGGDHHGPPKVNLWEDPLSPSRWKEE 254
           AA RQA  L  LS+   A  S ++ANLI RRGL+G  DHHGPP++N+WEDP+SPS+WKEE
Sbjct: 7   AAARQAAILTRLSS---AKPSPQSANLIQRRGLAGAADHHGPPRINVWEDPMSPSKWKEE 63

Query: 255 HFVIASLTGWGLLIFGGYKLFAGGKKDNKE 344
           HFVI SL+GWGLL FG YK F  GKKD +E
Sbjct: 64  HFVIVSLSGWGLLFFGSYKFFTRGKKDKEE 93


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