BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023056
         (675 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containi...   256   4e-66
ref|XP_002517120.1| pentatricopeptide repeat-containing protein,...   199   5e-49
ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containi...   184   1e-44
ref|XP_003610734.1| Pentatricopeptide repeat-containing protein ...   181   1e-43
ref|XP_002868248.1| pentatricopeptide repeat-containing protein ...   169   6e-40

>ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera] gi|297737070|emb|CBI26271.3| unnamed
           protein product [Vitis vinifera]
          Length = 727

 Score =  256 bits (653), Expect = 4e-66
 Identities = 136/221 (61%), Positives = 161/221 (72%), Gaps = 12/221 (5%)
 Frame = -2

Query: 629 MSQPILSFPSNP-----TTVHHHYNHLFS-------LTHLKQIHAQILRSGLDRXXXXXX 486
           MSQ  L+ P NP     TT+H H+  LFS       LTHLKQ+HAQILRS LDR      
Sbjct: 1   MSQTALALPPNPNPATPTTLHSHHT-LFSALSSATSLTHLKQVHAQILRSKLDRSTSLLV 59

Query: 485 XXXXXXXXXXXXXLDYALSVFTQMQKPEPHLCNRFLRELSRSNQPEQTLLVFEKLRREGW 306
                         DYALSVF  + KPE HLCNRFLRELSRS +PE+TLLV+E++R +G 
Sbjct: 60  KLVISSCALSSSL-DYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGL 118

Query: 305 VVDRFTFPSLLKASARVSALVEGMEFHGLASKMGFDSDPFVQTGLVGMYAACGHIQEARL 126
            VDRF+FP LLKA +RV +LVEG+E HGLA+K+GFDSDPFVQTGLV MYAACG I EARL
Sbjct: 119 AVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARL 178

Query: 125 VFDKMSYRDIVTWNIMIDGYCQTRLFDNVLQLFEEMKNSNI 3
           +FDKM +RD+VTW+IMIDGYCQ+ LF++ L LFEEMKN N+
Sbjct: 179 MFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNV 219



 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 43/145 (29%), Positives = 75/145 (51%)
 Frame = -2

Query: 437 ALSVFTQMQKPEPHLCNRFLRELSRSNQPEQTLLVFEKLRREGWVVDRFTFPSLLKASAR 258
           A SVF QM K +    +  +   + S+ P++ L +F +++  G   D+ T  S++ A A 
Sbjct: 308 ARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAH 367

Query: 257 VSALVEGMEFHGLASKMGFDSDPFVQTGLVGMYAACGHIQEARLVFDKMSYRDIVTWNIM 78
           + AL +    H    K GF     +   L+ MYA CG ++ AR +FDKM  +++++W  M
Sbjct: 368 LGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCM 427

Query: 77  IDGYCQTRLFDNVLQLFEEMKNSNI 3
           I  +       + L+ F +M++ NI
Sbjct: 428 ISAFAMHGDAGSALRFFHQMEDENI 452



 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 32/113 (28%), Positives = 56/113 (49%)
 Frame = -2

Query: 341 LLVFEKLRREGWVVDRFTFPSLLKASARVSALVEGMEFHGLASKMGFDSDPFVQTGLVGM 162
           LL+FE+++      D     ++L A  R   L  G   H    +     DP +Q+ LV M
Sbjct: 208 LLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTM 267

Query: 161 YAACGHIQEARLVFDKMSYRDIVTWNIMIDGYCQTRLFDNVLQLFEEMKNSNI 3
           YA+CG +  A  +F+KM+ +++V    M+ GY +    +N   +F +M   ++
Sbjct: 268 YASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDL 320


>ref|XP_002517120.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543755|gb|EEF45283.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 477

 Score =  199 bits (505), Expect = 5e-49
 Identities = 108/220 (49%), Positives = 146/220 (66%), Gaps = 8/220 (3%)
 Frame = -2

Query: 638 MTDMSQPILSFPSNPTTVH-------HHYNHLFSLTHLKQIHAQILRSGLDRXXXXXXXX 480
           MT ++ P +  P N TT+           +   SL +LKQ+HAQILRS L          
Sbjct: 4   MTTITFPTIPLPLNSTTIGTPLIPFLSSSSSSTSLYYLKQVHAQILRSNLS--PSIILKL 61

Query: 479 XXXXXXXXXXXLDYALSVFTQMQKPEPHLCNRFLRELSRSNQPEQTLLVFEKLRREG-WV 303
                      L+YALSVFT +  P P L N+ LR LSRS++PE  LLV++K+R +G + 
Sbjct: 62  ILSSSSSSISSLNYALSVFTHIPTPHPTLSNKLLRALSRSSKPETVLLVYQKIREDGLFG 121

Query: 302 VDRFTFPSLLKASARVSALVEGMEFHGLASKMGFDSDPFVQTGLVGMYAACGHIQEARLV 123
           +D+F+FP +LKA+A+++AL +GME HG+ +K+ F  DPF+QTGL+GMY  CG I EARLV
Sbjct: 122 LDKFSFPFILKAAAKIAALNDGMEIHGVLAKLDFYKDPFLQTGLMGMYVGCGKILEARLV 181

Query: 122 FDKMSYRDIVTWNIMIDGYCQTRLFDNVLQLFEEMKNSNI 3
           FDKMSYRD+VTW+ MI+GY Q   FD+ LQLFEEM++SN+
Sbjct: 182 FDKMSYRDVVTWSTMINGYYQGGHFDDALQLFEEMRSSNV 221



 Score = 79.3 bits (194), Expect = 6e-13
 Identities = 41/142 (28%), Positives = 72/142 (50%)
 Frame = -2

Query: 428 VFTQMQKPEPHLCNRFLRELSRSNQPEQTLLVFEKLRREGWVVDRFTFPSLLKASARVSA 249
           +F QM + +    +  +   + S+QP++ L +F +++  G   D  T  S++ A A +  
Sbjct: 313 IFNQMDEKDLICWSIMISGYAESDQPQEALHLFNEMQFLGIEPDEVTMLSVISACAHLGV 372

Query: 248 LVEGMEFHGLASKMGFDSDPFVQTGLVGMYAACGHIQEARLVFDKMSYRDIVTWNIMIDG 69
           L +    H    K GF     V   L+ MYA CG ++ AR VF+KM  R++++W  MI+ 
Sbjct: 373 LDQAKRIHMFVDKNGFGKALSVNNALIDMYAKCGCLEAARAVFEKMQIRNVISWTSMINA 432

Query: 68  YCQTRLFDNVLQLFEEMKNSNI 3
           +      ++ L  F +MK  N+
Sbjct: 433 FAIHGDANSALNYFHQMKEENV 454



 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 31/143 (21%)
 Frame = -2

Query: 350 EQTLLVFEKLRREGWVVDRFTFPSLLKASARVSALVEGMEFHGLASKMGFDSDPFVQTGL 171
           +  L +FE++R      D+    +++ A AR   L  G E H L  +  F  DP +++GL
Sbjct: 207 DDALQLFEEMRSSNVEPDKMVLSTIISACARAKNLGYGKEVHDLIIENNFALDPHLESGL 266

Query: 170 VGMYAAC-------------------------------GHIQEARLVFDKMSYRDIVTWN 84
           + +YA C                               G I++ARL+F++M  +D++ W+
Sbjct: 267 ISLYAGCGCMDMAKELFTNMSSRNLVVSTTMVSGYLKVGRIEDARLIFNQMDEKDLICWS 326

Query: 83  IMIDGYCQTRLFDNVLQLFEEMK 15
           IMI GY ++      L LF EM+
Sbjct: 327 IMISGYAESDQPQEALHLFNEMQ 349


>ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Glycine max]
          Length = 721

 Score =  184 bits (468), Expect = 1e-44
 Identities = 96/188 (51%), Positives = 125/188 (66%), Gaps = 4/188 (2%)
 Frame = -2

Query: 560 SLTHLKQIHAQILRSGLDRXXXXXXXXXXXXXXXXXXXL---DYALSVFTQMQKPEPHLC 390
           +L H+KQIHAQILRS +D                        DYALS+F+ +  P     
Sbjct: 24  TLRHVKQIHAQILRSKMDNSNLLLLKLVLCCCTLPSPSPSALDYALSLFSHIPNPPTRFS 83

Query: 389 NRFLRELSRSNQPEQTLLVFEKLRREGWVVDRFTFPSLLKASARVSALVEGMEFHGLASK 210
           N+ LR+ SR   PE TL ++  LRR G+ +DRF+FP LLKA +++SAL  G+E HGLASK
Sbjct: 84  NQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLASK 143

Query: 209 MGF-DSDPFVQTGLVGMYAACGHIQEARLVFDKMSYRDIVTWNIMIDGYCQTRLFDNVLQ 33
            GF  +DPF+Q+ L+ MYAACG I +AR +FDKMS+RD+VTWNIMIDGY Q   +D+VL+
Sbjct: 144 FGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLK 203

Query: 32  LFEEMKNS 9
           L+EEMK S
Sbjct: 204 LYEEMKTS 211



 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 44/142 (30%), Positives = 76/142 (53%)
 Frame = -2

Query: 428 VFTQMQKPEPHLCNRFLRELSRSNQPEQTLLVFEKLRREGWVVDRFTFPSLLKASARVSA 249
           +F +M + +    +  +   + S QP + L +F +++R   V D+ T  S++ A A V A
Sbjct: 305 IFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGA 364

Query: 248 LVEGMEFHGLASKMGFDSDPFVQTGLVGMYAACGHIQEARLVFDKMSYRDIVTWNIMIDG 69
           LV+    H  A K GF     +   L+ MYA CG++ +AR VF+ M  +++++W+ MI+ 
Sbjct: 365 LVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINA 424

Query: 68  YCQTRLFDNVLQLFEEMKNSNI 3
           +      D+ + LF  MK  NI
Sbjct: 425 FAMHGDADSAIALFHRMKEQNI 446



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 45/173 (26%), Positives = 70/173 (40%), Gaps = 31/173 (17%)
 Frame = -2

Query: 428 VFTQMQKPEPHLCNRFLRELSRSNQPEQTLLVFEKLRREGWVVDRFTFPSLLKASARVSA 249
           +F +M   +    N  +   S++   +  L ++E+++  G   D     ++L A A    
Sbjct: 173 LFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGN 232

Query: 248 LVEGMEFHGLASKMGFDSDPFVQTGLVGMYAAC--------------------------- 150
           L  G   H      GF     +QT LV MYA C                           
Sbjct: 233 LSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSG 292

Query: 149 ----GHIQEARLVFDKMSYRDIVTWNIMIDGYCQTRLFDNVLQLFEEMKNSNI 3
               G +Q+AR +FD+M  +D+V W+ MI GY ++      LQLF EM+   I
Sbjct: 293 YAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRI 345


>ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512069|gb|AES93692.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  181 bits (459), Expect = 1e-43
 Identities = 99/218 (45%), Positives = 133/218 (61%), Gaps = 9/218 (4%)
 Frame = -2

Query: 629 MSQPILSFPSNPTTVHHHYNHLFS----LTHLKQIHAQILRSGLD----RXXXXXXXXXX 474
           M+   +S   N  T H       S    L+HLKQIHAQIL S                  
Sbjct: 1   MAMTTMSHTHNRITTHPQLLTTLSSSTTLSHLKQIHAQILHSNTTPENTNTLLSKLALSI 60

Query: 473 XXXXXXXXXLDYALSVFTQMQKPEPHLCNRFLRELSRSNQPEQTLLVFEKLRR-EGWVVD 297
                    L YALSVF+Q+  P  H  N+ LR LSRS+ PE+T+ ++  LR    + +D
Sbjct: 61  CTLSSSSSSLHYALSVFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALD 120

Query: 296 RFTFPSLLKASARVSALVEGMEFHGLASKMGFDSDPFVQTGLVGMYAACGHIQEARLVFD 117
           RF+FPSLLKA ++VSA   G+E HGLASK+GF  DPF+QTGL+ MYA+C  I +ARL+FD
Sbjct: 121 RFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFD 180

Query: 116 KMSYRDIVTWNIMIDGYCQTRLFDNVLQLFEEMKNSNI 3
           KM + D V WN++IDGYCQ   +D+ L+LFE+M++S++
Sbjct: 181 KMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDM 218



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 41/142 (28%), Positives = 78/142 (54%)
 Frame = -2

Query: 428 VFTQMQKPEPHLCNRFLRELSRSNQPEQTLLVFEKLRREGWVVDRFTFPSLLKASARVSA 249
           +F QM + +    +  +   + S+QP++ L +F+++ ++  V D+ T  S++ A + V A
Sbjct: 310 IFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGA 369

Query: 248 LVEGMEFHGLASKMGFDSDPFVQTGLVGMYAACGHIQEARLVFDKMSYRDIVTWNIMIDG 69
           L +    H    + GF     V   L+ MYA CG++ +AR VF+ M  +++++W+ MI+ 
Sbjct: 370 LAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINA 429

Query: 68  YCQTRLFDNVLQLFEEMKNSNI 3
           +      D+ ++LF  MK  NI
Sbjct: 430 FAMHGNADSAIKLFRRMKEVNI 451



 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 31/168 (18%)
 Frame = -2

Query: 428 VFTQMQKPEPHLCNRFLRELSRSNQPEQTLLVFEKLRREGWVVDRFTFPSLLKASARVSA 249
           +F +M  P+    N  +    ++   +  L +FE +R      D     ++L A      
Sbjct: 178 LFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGN 237

Query: 248 LVEGMEFHGLASKMGFDSDPFVQTGLVGMYAAC--------------------------- 150
           L  G   H      G+  D  +QT L+ MYA C                           
Sbjct: 238 LSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSG 297

Query: 149 ----GHIQEARLVFDKMSYRDIVTWNIMIDGYCQTRLFDNVLQLFEEM 18
               G +++AR +FD+M  RD+V W+ MI GY ++      L+LF+EM
Sbjct: 298 YAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEM 345


>ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297314084|gb|EFH44507.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 725

 Score =  169 bits (427), Expect = 6e-40
 Identities = 89/187 (47%), Positives = 120/187 (64%), Gaps = 1/187 (0%)
 Frame = -2

Query: 560 SLTHLKQIHAQILRSGLDRXXXXXXXXXXXXXXXXXXXLDYALSVFTQMQK-PEPHLCNR 384
           SL H+KQ+HA ILR+ ++                      YAL++F+ +   PE  + N 
Sbjct: 27  SLNHIKQLHAHILRTVINHKLNSFLFNLSFSSSSINL--SYALNLFSSISPLPESIVFNS 84

Query: 383 FLRELSRSNQPEQTLLVFEKLRREGWVVDRFTFPSLLKASARVSALVEGMEFHGLASKMG 204
            LR+LSRS +P  T+L ++++R  G   DR +FP +LKA ++VSAL EGME HG A K+ 
Sbjct: 85  LLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGFAFKIA 144

Query: 203 FDSDPFVQTGLVGMYAACGHIQEARLVFDKMSYRDIVTWNIMIDGYCQTRLFDNVLQLFE 24
             SDPFV+TGL+ MYAACG I  AR VFD+MS RD+VTWN MI+ YC+  L D   +LFE
Sbjct: 145 TLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFE 204

Query: 23  EMKNSNI 3
           EMK+SN+
Sbjct: 205 EMKDSNV 211



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 42/147 (28%), Positives = 70/147 (47%)
 Frame = -2

Query: 443 DYALSVFTQMQKPEPHLCNRFLRELSRSNQPEQTLLVFEKLRREGWVVDRFTFPSLLKAS 264
           D A  +F Q +  +       +   + S+ P++ L VFE++   G   D  T  S++ A 
Sbjct: 298 DDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISAC 357

Query: 263 ARVSALVEGMEFHGLASKMGFDSDPFVQTGLVGMYAACGHIQEARLVFDKMSYRDIVTWN 84
             +  L +    H      G +S   +   L+ MYA CG +  AR VF+KM  R++V+W+
Sbjct: 358 VNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWS 417

Query: 83  IMIDGYCQTRLFDNVLQLFEEMKNSNI 3
            MI+ +       + L LF +MK  N+
Sbjct: 418 SMINAFAMHGEASDSLSLFAQMKQENV 444