BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023045
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29879.3| unnamed protein product [Vitis vinifera]              331   1e-88
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   331   1e-88
emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]   331   1e-88
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   315   8e-84
ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I sub...   313   2e-83

>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  331 bits (848), Expect = 1e-88
 Identities = 173/255 (67%), Positives = 198/255 (77%), Gaps = 9/255 (3%)
 Frame = -1

Query: 822  SMFFIEALLVSPIKFRPPTMGTDSVMEHPQTGLLGKVLTSNIALGNAHDNNSERSKIVNR 643
            SMFF+E +LV PIKFRPP+ G  SVMEHPQT LLGKVL +NIALGNAH NNSERSKI++R
Sbjct: 334  SMFFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISR 393

Query: 642  WWDLQQSINLLYDGKTSMS---RNVSPGICQLLEKKEGIFRQKMMGKRVNFSCRSVISPD 472
            W DLQQSIN+L+DGKT+     R+   GICQLLEKKEG+FRQKMMGKRVNF+CRSVISPD
Sbjct: 394  WMDLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPD 453

Query: 471  PYLAVNEIGIPPYFALRLTYPERVTPWNVANLRKAIINGSEIHPGATNYADKVANWKLPX 292
            PYLAVNEIGIPPYFALRLTYPE+VTPWNV  LR AIING EIHPGAT+Y DK++  KL  
Sbjct: 454  PYLAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAV 513

Query: 291  XXXXXXXXXXKLPSSRGVAS--GKNINCEIEGKIVYRHLQDGDIVLVNRQEWISE----C 130
                      KLPSSRGV +  G++ + E EGKIVYRHLQDGDIVLVNRQ  + +     
Sbjct: 514  NKKMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMA 573

Query: 129  YKVKELVAIETYLMH 85
            + V+ L   +T  MH
Sbjct: 574  HVVRVLKGEKTLRMH 588


>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score =  331 bits (848), Expect = 1e-88
 Identities = 173/255 (67%), Positives = 198/255 (77%), Gaps = 9/255 (3%)
 Frame = -1

Query: 822  SMFFIEALLVSPIKFRPPTMGTDSVMEHPQTGLLGKVLTSNIALGNAHDNNSERSKIVNR 643
            SMFF+E +LV PIKFRPP+ G  SVMEHPQT LLGKVL +NIALGNAH NNSERSKI++R
Sbjct: 405  SMFFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISR 464

Query: 642  WWDLQQSINLLYDGKTSMS---RNVSPGICQLLEKKEGIFRQKMMGKRVNFSCRSVISPD 472
            W DLQQSIN+L+DGKT+     R+   GICQLLEKKEG+FRQKMMGKRVNF+CRSVISPD
Sbjct: 465  WMDLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPD 524

Query: 471  PYLAVNEIGIPPYFALRLTYPERVTPWNVANLRKAIINGSEIHPGATNYADKVANWKLPX 292
            PYLAVNEIGIPPYFALRLTYPE+VTPWNV  LR AIING EIHPGAT+Y DK++  KL  
Sbjct: 525  PYLAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAV 584

Query: 291  XXXXXXXXXXKLPSSRGVAS--GKNINCEIEGKIVYRHLQDGDIVLVNRQEWISE----C 130
                      KLPSSRGV +  G++ + E EGKIVYRHLQDGDIVLVNRQ  + +     
Sbjct: 585  NKKMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMA 644

Query: 129  YKVKELVAIETYLMH 85
            + V+ L   +T  MH
Sbjct: 645  HVVRVLKGEKTLRMH 659


>emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]
          Length = 1350

 Score =  331 bits (848), Expect = 1e-88
 Identities = 173/255 (67%), Positives = 198/255 (77%), Gaps = 9/255 (3%)
 Frame = -1

Query: 822  SMFFIEALLVSPIKFRPPTMGTDSVMEHPQTGLLGKVLTSNIALGNAHDNNSERSKIVNR 643
            SMFF+E +LV PIKFRPP+ G  SVMEHPQT LLGKVL +NIALGNAH NNSERSKI++R
Sbjct: 453  SMFFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISR 512

Query: 642  WWDLQQSINLLYDGKTSMS---RNVSPGICQLLEKKEGIFRQKMMGKRVNFSCRSVISPD 472
            W DLQQSIN+L+DGKT+     R+   GICQLLEKKEG+FRQKMMGKRVNF+CRSVISPD
Sbjct: 513  WMDLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPD 572

Query: 471  PYLAVNEIGIPPYFALRLTYPERVTPWNVANLRKAIINGSEIHPGATNYADKVANWKLPX 292
            PYLAVNEIGIPPYFALRLTYPE+VTPWNV  LR AIING EIHPGAT+Y DK++  KL  
Sbjct: 573  PYLAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAV 632

Query: 291  XXXXXXXXXXKLPSSRGVAS--GKNINCEIEGKIVYRHLQDGDIVLVNRQEWISE----C 130
                      KLPSSRGV +  G++ + E EGKIVYRHLQDGDIVLVNRQ  + +     
Sbjct: 633  NKKMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMA 692

Query: 129  YKVKELVAIETYLMH 85
            + V+ L   +T  MH
Sbjct: 693  HVVRVLKGEKTLRMH 707


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score =  315 bits (807), Expect = 8e-84
 Identities = 165/255 (64%), Positives = 191/255 (74%), Gaps = 9/255 (3%)
 Frame = -1

Query: 822  SMFFIEALLVSPIKFRPPTMGTDSVMEHPQTGLLGKVLTSNIALGNAHDNNSERSKIVNR 643
            +MFF+E +LV PIKFRPPT G DSVMEHPQT LL KVL SNI+LG+AH N  E SKIV R
Sbjct: 334  AMFFLETILVPPIKFRPPTKGGDSVMEHPQTVLLSKVLQSNISLGDAHINK-EHSKIVRR 392

Query: 642  WWDLQQSINLLYDGKTSMS---RNVSPGICQLLEKKEGIFRQKMMGKRVNFSCRSVISPD 472
            W DLQQSIN L+D KT+     R  +PGICQLLEKKEG+FRQKMMGKRVN++CRSVISPD
Sbjct: 393  WLDLQQSINTLFDSKTAKGPGQREGAPGICQLLEKKEGLFRQKMMGKRVNYACRSVISPD 452

Query: 471  PYLAVNEIGIPPYFALRLTYPERVTPWNVANLRKAIINGSEIHPGATNYADKVANWKLPX 292
            PY+ VNEIGIPP FA++LTYPERVTPWN+A LR A+INGSE HPGAT+Y DK++  KLP 
Sbjct: 453  PYIGVNEIGIPPCFAVKLTYPERVTPWNIAKLRNAVINGSECHPGATHYVDKLSINKLPP 512

Query: 291  XXXXXXXXXXKLPSSRGVA--SGKNINCEIEGKIVYRHLQDGDIVLVNRQEWISE----C 130
                      KLPSSRG    +GK   CE EGKIVYRHLQDGD+VLVNRQ  + +     
Sbjct: 513  ARKARISISRKLPSSRGAVTQAGKGSECEFEGKIVYRHLQDGDVVLVNRQPTLHKPSIMA 572

Query: 129  YKVKELVAIETYLMH 85
            + V+ L   +T  MH
Sbjct: 573  HVVRVLKGEKTLRMH 587


>ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1653

 Score =  313 bits (803), Expect = 2e-83
 Identities = 164/255 (64%), Positives = 194/255 (76%), Gaps = 9/255 (3%)
 Frame = -1

Query: 822  SMFFIEALLVSPIKFRPPTMGTDSVMEHPQTGLLGKVLTSNIALGNAHDNNSERSKIVNR 643
            SMFF+E + V PIKFRPPT G D+VMEHPQT LL KVL  NI+LG+AH N S+ SK+++R
Sbjct: 325  SMFFLENIFVPPIKFRPPTKGGDNVMEHPQTVLLTKVLQCNISLGDAHLNKSDPSKVLSR 384

Query: 642  WWDLQQSINLLYDGKTSMS---RNVSPGICQLLEKKEGIFRQKMMGKRVNFSCRSVISPD 472
            W DLQQS+N+L+D KT+     R+V+ GICQLLEKKEGIFRQKMMGKRVNF+CRSVISPD
Sbjct: 385  WMDLQQSVNMLFDNKTASGESKRDVATGICQLLEKKEGIFRQKMMGKRVNFACRSVISPD 444

Query: 471  PYLAVNEIGIPPYFALRLTYPERVTPWNVANLRKAIINGSEIHPGATNYADKVANWKLPX 292
            PYLAVNEIGIPPYFALRL+YPERVTPWNV  LR AI+NG E HPGAT+YADKV+  KLP 
Sbjct: 445  PYLAVNEIGIPPYFALRLSYPERVTPWNVVKLRNAILNGPESHPGATHYADKVSIVKLPP 504

Query: 291  XXXXXXXXXXKLPSSRGVA--SGKNINCEIEGKIVYRHLQDGDIVLVNRQEWISE----C 130
                      KLP+SRGV    GK  + E EGK+VYRHL+DGD+VLVNRQ  + +     
Sbjct: 505  KGKLLSLTSRKLPTSRGVILHQGKISDHEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMA 564

Query: 129  YKVKELVAIETYLMH 85
            + V+ L   +T  MH
Sbjct: 565  HIVRVLKGEKTVRMH 579