BLASTX nr result

ID: Panax21_contig00023038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023038
         (983 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70428.1| hypothetical protein VITISV_037530 [Vitis vinifera]    87   6e-15
dbj|BAK61860.1| hypothetical protein [Citrus unshiu]                   69   2e-09
ref|XP_002309472.1| predicted protein [Populus trichocarpa] gi|2...    68   3e-09
ref|NP_001060609.1| Os07g0673600 [Oryza sativa Japonica Group] g...    60   8e-07
emb|CBI20706.3| unnamed protein product [Vitis vinifera]               57   5e-06

>emb|CAN70428.1| hypothetical protein VITISV_037530 [Vitis vinifera]
          Length = 456

 Score = 87.0 bits (214), Expect = 6e-15
 Identities = 63/124 (50%), Positives = 73/124 (58%), Gaps = 5/124 (4%)
 Frame = -1

Query: 365 LRLTGSKLEKPTTAQIMATSTAPPAAMLSKKLLRDGEKXXXXXXXXXXXXXXAVNAAAVS 186
           +RLTGSKL  P TA  +A  T PPA MLS+K LRDGE               AVNAAAV 
Sbjct: 266 VRLTGSKLATPITAPTIAPRTTPPATMLSRKFLRDGE-XPEAASAASGSTMEAVNAAAVR 324

Query: 185 PVIAFSFKEAWT*SAALDDFEFTNSVFFVGFN----GNAVEIGD*RS-FWLADINGIAIE 21
           PV AFS +EA+T S    DF FT + FF GF       A E+G   S F LA+++ IAIE
Sbjct: 325 PVXAFSLREAFTSSRLPLDFGFTATAFFDGFTCSGWKKASEVGLWSSLFXLAEVSRIAIE 384

Query: 20  TEAI 9
           T AI
Sbjct: 385 TLAI 388


>dbj|BAK61860.1| hypothetical protein [Citrus unshiu]
          Length = 123

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 47/123 (38%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
 Frame = +1

Query: 10  MASVSMAMPLISASQKDLQSPISTA----LPLKPTKKTLFVNSKSSRAALQVQASLKEKA 177
           MASVSMAMPL SA+Q  L  P S +    LP++P+K   F+    SRA LQVQASLKEKA
Sbjct: 1   MASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKA 60

Query: 178 ITGXXXXXXXXXXXXXXXXXXXXXXXXXXLNNFXXXXXXXXXXXXXXXXXXXXFSNFDPV 357
           +TG                          L NF                     +NFDPV
Sbjct: 61  VTGLTAAALTASMVIPEVAEAAGPGLSPSLKNFLLSIVAGGVVLAALVGAVIGVANFDPV 120

Query: 358 KRS 366
           KR+
Sbjct: 121 KRT 123


>ref|XP_002309472.1| predicted protein [Populus trichocarpa] gi|222855448|gb|EEE92995.1|
           predicted protein [Populus trichocarpa]
          Length = 124

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 47/124 (37%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
 Frame = +1

Query: 10  MASVSMAMPLISASQKDLQSPISTA-----LPLKPTKKTLFVNSKSSRAALQVQASLKEK 174
           MASVSMAMPL SASQK L+ P ++      LP++P+ +        SRA L+VQASLKEK
Sbjct: 1   MASVSMAMPLASASQKRLEQPPNSQSFLKPLPIRPSMEVGLSTKSKSRARLEVQASLKEK 60

Query: 175 AITGXXXXXXXXXXXXXXXXXXXXXXXXXXLNNFXXXXXXXXXXXXXXXXXXXXFSNFDP 354
           A+TG                          L NF                     SNFDP
Sbjct: 61  AVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSIAAGGVVAVAIIGAVLGVSNFDP 120

Query: 355 VKRS 366
           VKRS
Sbjct: 121 VKRS 124


>ref|NP_001060609.1| Os07g0673600 [Oryza sativa Japonica Group]
           gi|113612145|dbj|BAF22523.1| Os07g0673600 [Oryza sativa
           Japonica Group]
          Length = 195

 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 35/70 (50%), Positives = 40/70 (57%)
 Frame = -1

Query: 365 LRLTGSKLEKPTTAQIMATSTAPPAAMLSKKLLRDGEKXXXXXXXXXXXXXXAVNAAAVS 186
           +RLTGSKLE  TTA  MATST PP  ML +K L DG +              A  AAAVS
Sbjct: 22  VRLTGSKLETATTAPTMATSTTPPDTMLRRKFLSDGVRLPCAASATSGRTIAAAMAAAVS 81

Query: 185 PVIAFSFKEA 156
           P +A SF +A
Sbjct: 82  PAVALSFIDA 91


>emb|CBI20706.3| unnamed protein product [Vitis vinifera]
          Length = 123

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 38/64 (59%), Positives = 44/64 (68%), Gaps = 5/64 (7%)
 Frame = +1

Query: 10  MASVSMAMPLISASQKDL-QSPISTA----LPLKPTKKTLFVNSKSSRAALQVQASLKEK 174
           MASVSMAM L SASQ  L Q P S A    L +KP+KK + V  KS  + L+V+ASLKEK
Sbjct: 1   MASVSMAMRLTSASQNRLLQRPTSEAFFQPLQVKPSKKAVAVKPKSRGSRLEVKASLKEK 60

Query: 175 AITG 186
           AITG
Sbjct: 61  AITG 64


Top