BLASTX nr result

ID: Panax21_contig00023027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023027
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61446.1| hypothetical protein VITISV_024139 [Vitis vinifera]    56   4e-15
ref|XP_002278415.1| PREDICTED: WD repeat-containing protein 5 [V...    56   3e-14
ref|XP_004147003.1| PREDICTED: WD repeat-containing protein 5-li...    58   4e-14
ref|XP_004158942.1| PREDICTED: WD repeat-containing protein 5-li...    58   4e-14
ref|XP_002520730.1| WD-repeat protein, putative [Ricinus communi...    55   7e-13

>emb|CAN61446.1| hypothetical protein VITISV_024139 [Vitis vinifera]
          Length = 315

 Score = 56.2 bits (134), Expect(3) = 4e-15
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = +3

Query: 201 TPAIFGLPAFECVKTLRGHTNFVFCVNFSPQSNLVIFDSF 320
           T  I+   + ECVKTLRGHT+ VFCVNF+PQSNL++  SF
Sbjct: 91  TLRIWDAQSAECVKTLRGHTDLVFCVNFNPQSNLIVSGSF 130



 Score = 45.1 bits (105), Expect(3) = 4e-15
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
 Frame = +2

Query: 59  ISCIKILNNGKLFAS--LDKP--PWG*LKPYLKSSILVGHSDNLNNLAWSSDSRYIWS 220
           +SC+K  ++G L AS  LDK    W      LKS  LVGHS  +++LAWSSDS YI S
Sbjct: 29  VSCVKFSSDGTLLASASLDKTLIVWSSQTLTLKSR-LVGHSGGISDLAWSSDSHYICS 85



 Score = 25.0 bits (53), Expect(3) = 4e-15
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +1

Query: 4  LPYRPYRLHQTL 39
          LPYRPYRL +TL
Sbjct: 11 LPYRPYRLLRTL 22


>ref|XP_002278415.1| PREDICTED: WD repeat-containing protein 5 [Vitis vinifera]
          Length = 315

 Score = 56.2 bits (134), Expect(3) = 3e-14
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = +3

Query: 201 TPAIFGLPAFECVKTLRGHTNFVFCVNFSPQSNLVIFDSF 320
           T  I+   + ECVKTLRGHT+ VFCVNF+PQSNL++  SF
Sbjct: 91  TLRIWDAQSAECVKTLRGHTDLVFCVNFNPQSNLIVSGSF 130



 Score = 45.1 bits (105), Expect(3) = 3e-14
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
 Frame = +2

Query: 59  ISCIKILNNGKLFAS--LDKP--PWG*LKPYLKSSILVGHSDNLNNLAWSSDSRYIWS 220
           +SC+K  ++G L AS  LDK    W      LKS  LVGHS  +++LAWSSDS YI S
Sbjct: 29  VSCVKFSSDGTLLASASLDKTLIVWSSQTLTLKSR-LVGHSGGISDLAWSSDSHYICS 85



 Score = 21.9 bits (45), Expect(3) = 3e-14
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +1

Query: 4  LPYRPYRLHQTL 39
          L YRPYRL +TL
Sbjct: 11 LQYRPYRLLRTL 22


>ref|XP_004147003.1| PREDICTED: WD repeat-containing protein 5-like [Cucumis sativus]
          Length = 358

 Score = 57.8 bits (138), Expect(2) = 4e-14
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = +3

Query: 222 PAFECVKTLRGHTNFVFCVNFSPQSNLVIFDSF 320
           P  ECVKTLRGH++FVFCVNF+PQSNL++  SF
Sbjct: 141 PTGECVKTLRGHSDFVFCVNFNPQSNLIVSGSF 173



 Score = 45.4 bits (106), Expect(2) = 4e-14
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 7/61 (11%)
 Frame = +2

Query: 59  ISCIKILNNGKLFAS--LDKPPWG*LKPYLKSSI-----LVGHSDNLNNLAWSSDSRYIW 217
           +SC+K  N+G L AS  LDK     L  +  SS+     LVGHS+ +++LAWSSDS YI 
Sbjct: 70  VSCVKFSNDGTLLASASLDKT----LIIWSSSSLTLRHRLVGHSEGISDLAWSSDSHYIC 125

Query: 218 S 220
           S
Sbjct: 126 S 126


>ref|XP_004158942.1| PREDICTED: WD repeat-containing protein 5-like [Cucumis sativus]
          Length = 335

 Score = 57.8 bits (138), Expect(2) = 4e-14
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = +3

Query: 222 PAFECVKTLRGHTNFVFCVNFSPQSNLVIFDSF 320
           P  ECVKTLRGH++FVFCVNF+PQSNL++  SF
Sbjct: 118 PTGECVKTLRGHSDFVFCVNFNPQSNLIVSGSF 150



 Score = 45.4 bits (106), Expect(2) = 4e-14
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 7/61 (11%)
 Frame = +2

Query: 59  ISCIKILNNGKLFAS--LDKPPWG*LKPYLKSSI-----LVGHSDNLNNLAWSSDSRYIW 217
           +SC+K  N+G L AS  LDK     L  +  SS+     LVGHS+ +++LAWSSDS YI 
Sbjct: 47  VSCVKFSNDGTLLASASLDKT----LIIWSSSSLTLRHRLVGHSEGISDLAWSSDSHYIC 102

Query: 218 S 220
           S
Sbjct: 103 S 103


>ref|XP_002520730.1| WD-repeat protein, putative [Ricinus communis]
           gi|223540115|gb|EEF41692.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 318

 Score = 54.7 bits (130), Expect(3) = 7e-13
 Identities = 21/33 (63%), Positives = 29/33 (87%)
 Frame = +3

Query: 222 PAFECVKTLRGHTNFVFCVNFSPQSNLVIFDSF 320
           P F+C+KTL+GH++ VFCVNF+PQSNL++  SF
Sbjct: 101 PPFDCLKTLKGHSDVVFCVNFNPQSNLIVSGSF 133



 Score = 41.6 bits (96), Expect(3) = 7e-13
 Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 7/61 (11%)
 Frame = +2

Query: 59  ISCIKILNNGKLFAS--LDKPPWG*LKPYLKSSI-----LVGHSDNLNNLAWSSDSRYIW 217
           +SC+K  N+G L AS  LDK     L  +  S++     L GHS+ +++LAWSSDS YI 
Sbjct: 31  VSCVKFSNDGTLLASASLDKT----LIIWSASNLSLLHRLFGHSEGVSDLAWSSDSHYIC 86

Query: 218 S 220
           S
Sbjct: 87  S 87



 Score = 22.3 bits (46), Expect(3) = 7e-13
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1

Query: 7  PYRPYRLHQTL 39
          PY+PYRL +TL
Sbjct: 14 PYKPYRLLKTL 24


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