BLASTX nr result
ID: Panax21_contig00023027
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00023027 (613 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN61446.1| hypothetical protein VITISV_024139 [Vitis vinifera] 56 4e-15 ref|XP_002278415.1| PREDICTED: WD repeat-containing protein 5 [V... 56 3e-14 ref|XP_004147003.1| PREDICTED: WD repeat-containing protein 5-li... 58 4e-14 ref|XP_004158942.1| PREDICTED: WD repeat-containing protein 5-li... 58 4e-14 ref|XP_002520730.1| WD-repeat protein, putative [Ricinus communi... 55 7e-13 >emb|CAN61446.1| hypothetical protein VITISV_024139 [Vitis vinifera] Length = 315 Score = 56.2 bits (134), Expect(3) = 4e-15 Identities = 25/40 (62%), Positives = 31/40 (77%) Frame = +3 Query: 201 TPAIFGLPAFECVKTLRGHTNFVFCVNFSPQSNLVIFDSF 320 T I+ + ECVKTLRGHT+ VFCVNF+PQSNL++ SF Sbjct: 91 TLRIWDAQSAECVKTLRGHTDLVFCVNFNPQSNLIVSGSF 130 Score = 45.1 bits (105), Expect(3) = 4e-15 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%) Frame = +2 Query: 59 ISCIKILNNGKLFAS--LDKP--PWG*LKPYLKSSILVGHSDNLNNLAWSSDSRYIWS 220 +SC+K ++G L AS LDK W LKS LVGHS +++LAWSSDS YI S Sbjct: 29 VSCVKFSSDGTLLASASLDKTLIVWSSQTLTLKSR-LVGHSGGISDLAWSSDSHYICS 85 Score = 25.0 bits (53), Expect(3) = 4e-15 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +1 Query: 4 LPYRPYRLHQTL 39 LPYRPYRL +TL Sbjct: 11 LPYRPYRLLRTL 22 >ref|XP_002278415.1| PREDICTED: WD repeat-containing protein 5 [Vitis vinifera] Length = 315 Score = 56.2 bits (134), Expect(3) = 3e-14 Identities = 25/40 (62%), Positives = 31/40 (77%) Frame = +3 Query: 201 TPAIFGLPAFECVKTLRGHTNFVFCVNFSPQSNLVIFDSF 320 T I+ + ECVKTLRGHT+ VFCVNF+PQSNL++ SF Sbjct: 91 TLRIWDAQSAECVKTLRGHTDLVFCVNFNPQSNLIVSGSF 130 Score = 45.1 bits (105), Expect(3) = 3e-14 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%) Frame = +2 Query: 59 ISCIKILNNGKLFAS--LDKP--PWG*LKPYLKSSILVGHSDNLNNLAWSSDSRYIWS 220 +SC+K ++G L AS LDK W LKS LVGHS +++LAWSSDS YI S Sbjct: 29 VSCVKFSSDGTLLASASLDKTLIVWSSQTLTLKSR-LVGHSGGISDLAWSSDSHYICS 85 Score = 21.9 bits (45), Expect(3) = 3e-14 Identities = 9/12 (75%), Positives = 10/12 (83%) Frame = +1 Query: 4 LPYRPYRLHQTL 39 L YRPYRL +TL Sbjct: 11 LQYRPYRLLRTL 22 >ref|XP_004147003.1| PREDICTED: WD repeat-containing protein 5-like [Cucumis sativus] Length = 358 Score = 57.8 bits (138), Expect(2) = 4e-14 Identities = 24/33 (72%), Positives = 29/33 (87%) Frame = +3 Query: 222 PAFECVKTLRGHTNFVFCVNFSPQSNLVIFDSF 320 P ECVKTLRGH++FVFCVNF+PQSNL++ SF Sbjct: 141 PTGECVKTLRGHSDFVFCVNFNPQSNLIVSGSF 173 Score = 45.4 bits (106), Expect(2) = 4e-14 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 7/61 (11%) Frame = +2 Query: 59 ISCIKILNNGKLFAS--LDKPPWG*LKPYLKSSI-----LVGHSDNLNNLAWSSDSRYIW 217 +SC+K N+G L AS LDK L + SS+ LVGHS+ +++LAWSSDS YI Sbjct: 70 VSCVKFSNDGTLLASASLDKT----LIIWSSSSLTLRHRLVGHSEGISDLAWSSDSHYIC 125 Query: 218 S 220 S Sbjct: 126 S 126 >ref|XP_004158942.1| PREDICTED: WD repeat-containing protein 5-like [Cucumis sativus] Length = 335 Score = 57.8 bits (138), Expect(2) = 4e-14 Identities = 24/33 (72%), Positives = 29/33 (87%) Frame = +3 Query: 222 PAFECVKTLRGHTNFVFCVNFSPQSNLVIFDSF 320 P ECVKTLRGH++FVFCVNF+PQSNL++ SF Sbjct: 118 PTGECVKTLRGHSDFVFCVNFNPQSNLIVSGSF 150 Score = 45.4 bits (106), Expect(2) = 4e-14 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 7/61 (11%) Frame = +2 Query: 59 ISCIKILNNGKLFAS--LDKPPWG*LKPYLKSSI-----LVGHSDNLNNLAWSSDSRYIW 217 +SC+K N+G L AS LDK L + SS+ LVGHS+ +++LAWSSDS YI Sbjct: 47 VSCVKFSNDGTLLASASLDKT----LIIWSSSSLTLRHRLVGHSEGISDLAWSSDSHYIC 102 Query: 218 S 220 S Sbjct: 103 S 103 >ref|XP_002520730.1| WD-repeat protein, putative [Ricinus communis] gi|223540115|gb|EEF41692.1| WD-repeat protein, putative [Ricinus communis] Length = 318 Score = 54.7 bits (130), Expect(3) = 7e-13 Identities = 21/33 (63%), Positives = 29/33 (87%) Frame = +3 Query: 222 PAFECVKTLRGHTNFVFCVNFSPQSNLVIFDSF 320 P F+C+KTL+GH++ VFCVNF+PQSNL++ SF Sbjct: 101 PPFDCLKTLKGHSDVVFCVNFNPQSNLIVSGSF 133 Score = 41.6 bits (96), Expect(3) = 7e-13 Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 7/61 (11%) Frame = +2 Query: 59 ISCIKILNNGKLFAS--LDKPPWG*LKPYLKSSI-----LVGHSDNLNNLAWSSDSRYIW 217 +SC+K N+G L AS LDK L + S++ L GHS+ +++LAWSSDS YI Sbjct: 31 VSCVKFSNDGTLLASASLDKT----LIIWSASNLSLLHRLFGHSEGVSDLAWSSDSHYIC 86 Query: 218 S 220 S Sbjct: 87 S 87 Score = 22.3 bits (46), Expect(3) = 7e-13 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = +1 Query: 7 PYRPYRLHQTL 39 PY+PYRL +TL Sbjct: 14 PYKPYRLLKTL 24