BLASTX nr result

ID: Panax21_contig00023020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023020
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28887.3| unnamed protein product [Vitis vinifera]              197   2e-48
ref|XP_002271945.1| PREDICTED: uncharacterized protein LOC100248...   185   6e-45
ref|XP_002320496.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_003601543.1| Ubiquitin and WLM domain-containing protein ...   135   7e-30
ref|XP_003605244.1| Ubiquitin and WLM domain-containing protein ...   130   2e-28

>emb|CBI28887.3| unnamed protein product [Vitis vinifera]
          Length = 606

 Score =  197 bits (500), Expect = 2e-48
 Identities = 111/234 (47%), Positives = 140/234 (59%), Gaps = 47/234 (20%)
 Frame = -2

Query: 563  NNEPDPDDGNSNENKIEPDPDDSRAGEIMKSEPYDETNERRIFSEPDTDDSEMTEWVPPS 384
            ++EPDPDD + N+ KIEP P    +G  M+SE Y   NE ++  EPD DD EM ++VP S
Sbjct: 306  DDEPDPDDFSDNQRKIEPCPH-YESGGFMESELYSGINESKVIFEPDPDDVEMQQFVPHS 364

Query: 383  KADQVLAKTPVHGKPDPDDL---DSQTHLI----------------------------GN 297
            + D+ LA T    +PDPDDL   DS+  ++                            GN
Sbjct: 365  RTDEKLASTKTSEEPDPDDLETLDSKVQMMKTLDEPDPDDSEVKRNGLGCGNISRLDHGN 424

Query: 296  ----------------FVEPDPDDSQNGVVTTEPDPDDSVVPLQGTFRTQTDEPDPDDQE 165
                            + EPDPDDSQ   V  EPDPDD++V    T    TDEPDPDD+E
Sbjct: 425  SLVMKTMEDQCPQRKGYKEPDPDDSQANGVMAEPDPDDNLVHPLDTSIMHTDEPDPDDEE 484

Query: 164  LKRIQDPVTIVCGRLKKAIEMLQSEVNPSEAVIILQTLFKIIRNVIEHPDEVKF 3
            L+RIQDPVT+VC RL+KAIEML+SEVN ++A I+LQTLFKIIRN+IEHPDE+KF
Sbjct: 485  LQRIQDPVTVVCNRLQKAIEMLRSEVNATQAAIVLQTLFKIIRNLIEHPDEIKF 538


>ref|XP_002271945.1| PREDICTED: uncharacterized protein LOC100248207 [Vitis vinifera]
          Length = 713

 Score =  185 bits (469), Expect = 6e-45
 Identities = 108/261 (41%), Positives = 140/261 (53%), Gaps = 67/261 (25%)
 Frame = -2

Query: 584  NKDHCEPNNEPDPDDGNSNENKIEPDPDDSRAGEIMKSEPYDETNERRIFSEPDTDDSEM 405
            N+   + ++EPDPDD + N+ KIEP P    +G  M+SE Y   NE ++  EPD DD EM
Sbjct: 386  NRAQSKVDDEPDPDDFSDNQRKIEPCPH-YESGGFMESELYSGINESKVIFEPDPDDVEM 444

Query: 404  TEWVPPSKADQVLAKTPVH----------------------------------------- 348
             ++VP S+ D+ LA T                                            
Sbjct: 445  QQFVPHSRTDEKLASTKTSEEPDPDDLEVSVKQHLVVEPEPENSQLLKTLDSKVQMMKTL 504

Query: 347  GKPDPDDLDSQTHLIG--------------------------NFVEPDPDDSQNGVVTTE 246
             +PDPDD + + + +G                           + EPDPDDSQ   V  E
Sbjct: 505  DEPDPDDSEVKRNGLGCGNISRLDHGNSLVMKTMEDQCPQRKGYKEPDPDDSQANGVMAE 564

Query: 245  PDPDDSVVPLQGTFRTQTDEPDPDDQELKRIQDPVTIVCGRLKKAIEMLQSEVNPSEAVI 66
            PDPDD++V    T    TDEPDPDD+EL+RIQDPVT+VC RL+KAIEML+SEVN ++A I
Sbjct: 565  PDPDDNLVHPLDTSIMHTDEPDPDDEELQRIQDPVTVVCNRLQKAIEMLRSEVNATQAAI 624

Query: 65   ILQTLFKIIRNVIEHPDEVKF 3
            +LQTLFKIIRN+IEHPDE+KF
Sbjct: 625  VLQTLFKIIRNLIEHPDEIKF 645


>ref|XP_002320496.1| predicted protein [Populus trichocarpa] gi|222861269|gb|EEE98811.1|
           predicted protein [Populus trichocarpa]
          Length = 618

 Score =  162 bits (411), Expect = 3e-38
 Identities = 93/207 (44%), Positives = 121/207 (58%), Gaps = 13/207 (6%)
 Frame = -2

Query: 584 NKDHCEPNNEPDPDDGNSNENKIEPDPDDSRAG--EIMK------SEPYDETN----ERR 441
           +K   +P+++PDPD+   N+NK EPDPDDS+    E+M        E  D  N      +
Sbjct: 368 HKSQWKPHHQPDPDEHPFNQNKNEPDPDDSQGNHHEVMDILNGNHHEVMDTLNGGIRADK 427

Query: 440 IFSEPDTDDSEMTEWVPPSKADQVLAKTPVHGKPDPDDLDSQTHLIGNFVEPDPDDSQ-N 264
            F EPD DD  +TE                       +++   HL   + EPDPD+S+ N
Sbjct: 428 TFDEPDPDDCLVTE-----------------------NIEDHLHLKKAYKEPDPDESETN 464

Query: 263 GVVTTEPDPDDSVVPLQGTFRTQTDEPDPDDQELKRIQDPVTIVCGRLKKAIEMLQSEVN 84
            VV  EPDPDD +       R Q DEPDPDD+EL+RIQDPV++VC RL+KA E L++E+N
Sbjct: 465 QVVQAEPDPDDDLAASDEVSRMQIDEPDPDDEELRRIQDPVSVVCSRLQKATETLRAELN 524

Query: 83  PSEAVIILQTLFKIIRNVIEHPDEVKF 3
            +EA   LQTLFKIIRNVIEHPD+ KF
Sbjct: 525 STEAAAALQTLFKIIRNVIEHPDQSKF 551


>ref|XP_003601543.1| Ubiquitin and WLM domain-containing protein [Medicago truncatula]
           gi|355490591|gb|AES71794.1| Ubiquitin and WLM
           domain-containing protein [Medicago truncatula]
          Length = 666

 Score =  135 bits (339), Expect = 7e-30
 Identities = 82/188 (43%), Positives = 104/188 (55%), Gaps = 2/188 (1%)
 Frame = -2

Query: 560 NEPDPDDGNSNENKIEPDPDDSRAGEIMKSEPYDETNERRIFSEPDTDDSEMTEWVPPSK 381
           NEPDPDD   N  K EPDPDDS  G+ +       T + R   +    D  +TE      
Sbjct: 411 NEPDPDDRIENGMKHEPDPDDSYHGKAVLFTVCPNTTDSRTVFKQKPIDFGVTEPSHSQT 470

Query: 380 ADQVLAKTPVHGKPDPDDLDSQTHLIGNFV-EPDPDDSQNGV-VTTEPDPDDSVVPLQGT 207
           +   +  T ++       L S T  I  F+ EP  D+    + +T EPDPDD +VP    
Sbjct: 471 STVNMDATYLNANDSETSLKSITPAIAVFIKEPAHDEFDAEMNMTEEPDPDDCMVPTPIL 530

Query: 206 FRTQTDEPDPDDQELKRIQDPVTIVCGRLKKAIEMLQSEVNPSEAVIILQTLFKIIRNVI 27
              QT EPDPDDQEL+RI   +T VC RL+KA+EML+SEVNP +    LQTL KIIRN I
Sbjct: 531 STLQTGEPDPDDQELQRINGAMTAVCSRLQKALEMLKSEVNPMQGTSTLQTLLKIIRNAI 590

Query: 26  EHPDEVKF 3
           EHP+  K+
Sbjct: 591 EHPEMEKY 598


>ref|XP_003605244.1| Ubiquitin and WLM domain-containing protein [Medicago truncatula]
           gi|355506299|gb|AES87441.1| Ubiquitin and WLM
           domain-containing protein [Medicago truncatula]
          Length = 652

 Score =  130 bits (326), Expect = 2e-28
 Identities = 80/189 (42%), Positives = 101/189 (53%), Gaps = 3/189 (1%)
 Frame = -2

Query: 560 NEPDPDDGNSNENKIEPDPDDSRAGEIMKSEPYDETNERRIFSEPDTDDSEMTEWVPPSK 381
           NEPDPDD   N  K EPDPDDS  G+ +       T + R   +    D  +TE      
Sbjct: 411 NEPDPDDRIENGMKHEPDPDDSYHGKAVLFTVCPNTTDSRTVFKQKPIDFGVTE------ 464

Query: 380 ADQVLAKTPVHGKPDPDDLDSQTHLIGNFVEPDPDDSQNGV---VTTEPDPDDSVVPLQG 210
                   P H +    ++D+ T+L  N  E         +   +T EPDPDD +VP   
Sbjct: 465 --------PSHSQTSTVNMDA-TYLNANDSETSLKSITPAIEMNMTEEPDPDDCMVPTPI 515

Query: 209 TFRTQTDEPDPDDQELKRIQDPVTIVCGRLKKAIEMLQSEVNPSEAVIILQTLFKIIRNV 30
               QT EPDPDDQEL+RI   +T VC RL+KA+EML+SEVNP +    LQTL KIIRN 
Sbjct: 516 LSTLQTGEPDPDDQELQRINGAMTAVCSRLQKALEMLKSEVNPMQGTSTLQTLLKIIRNA 575

Query: 29  IEHPDEVKF 3
           IEHP+  K+
Sbjct: 576 IEHPEMEKY 584


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