BLASTX nr result

ID: Panax21_contig00023013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023013
         (1157 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523570.1| conserved hypothetical protein [Ricinus comm...   280   4e-73
ref|XP_002277554.1| PREDICTED: eukaryotic initiation factor 4A [...   273   6e-71
ref|XP_004141918.1| PREDICTED: ATP-dependent RNA helicase eIF4A-...   272   1e-70
ref|XP_004141917.1| PREDICTED: ATP-dependent RNA helicase eIF4A-...   269   9e-70
ref|XP_004141920.1| PREDICTED: ATP-dependent RNA helicase eIF4A-...   268   3e-69

>ref|XP_002523570.1| conserved hypothetical protein [Ricinus communis]
           gi|223537132|gb|EEF38765.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 207

 Score =  280 bits (717), Expect = 4e-73
 Identities = 143/189 (75%), Positives = 165/189 (87%)
 Frame = -2

Query: 928 RHFYLAVDRLQFKMETLVELLGMACRRPCLPMVVCCSTRDELDAVCSAVSNLSYVSISPL 749
           RHFY+AVDRL FKMETLVELLG+A RR  LPMVVCCS+RDELDAVCS VSNL Y+S + L
Sbjct: 20  RHFYVAVDRLHFKMETLVELLGVAGRRSGLPMVVCCSSRDELDAVCSVVSNLPYISFASL 79

Query: 748 YSDLSEVDRSLVLDKFRQGTIKWNKNATIQCADDEETGKEELKSRMIVATDACLPLLASG 569
           YSDL+E +R+ VL+KFRQ T++WN+N T Q  + +E  KE+ KS MIV TD CLPLLASG
Sbjct: 80  YSDLAEAERTSVLEKFRQVTMRWNQNITAQSGNKDEIEKED-KSHMIVVTDTCLPLLASG 138

Query: 568 EAPVSARVLINYELPTKKETYMRRMATCLAADGIVINMVVGGEVVTLKSIEESSSLVIAE 389
           E+P+SARVLINYELPTKKETY RRM++CLAADGIVINMVVGGEVVTLK+IEESSSLVIAE
Sbjct: 139 ESPISARVLINYELPTKKETYARRMSSCLAADGIVINMVVGGEVVTLKNIEESSSLVIAE 198

Query: 388 MPIHIFEML 362
           MPI+I E+L
Sbjct: 199 MPINISEIL 207


>ref|XP_002277554.1| PREDICTED: eukaryotic initiation factor 4A [Vitis vinifera]
           gi|296082429|emb|CBI21434.3| unnamed protein product
           [Vitis vinifera]
          Length = 210

 Score =  273 bits (698), Expect = 6e-71
 Identities = 135/190 (71%), Positives = 162/190 (85%)
 Frame = -2

Query: 931 QRHFYLAVDRLQFKMETLVELLGMACRRPCLPMVVCCSTRDELDAVCSAVSNLSYVSISP 752
           QRHFY+AVDR QFKMETLV+LL +A  RPCLP+ VCCS+RDELDAVCSAVSNL ++S++ 
Sbjct: 22  QRHFYVAVDRPQFKMETLVDLLELASHRPCLPIAVCCSSRDELDAVCSAVSNLPFISLAS 81

Query: 751 LYSDLSEVDRSLVLDKFRQGTIKWNKNATIQCADDEETGKEELKSRMIVATDACLPLLAS 572
           LYSDL+E +R+L+L+ FRQ T+++ +N   Q  +D+E  K E KS M+V TDACLP LAS
Sbjct: 82  LYSDLAEAERALILENFRQATMRY-QNVIAQSGEDKEIKKGEDKSHMVVVTDACLPFLAS 140

Query: 571 GEAPVSARVLINYELPTKKETYMRRMATCLAADGIVINMVVGGEVVTLKSIEESSSLVIA 392
           GE+ +SARVLINYELPTKKETYMRRMATCL ADGIVINMVVGGEVVTLKS+EESS L +A
Sbjct: 141 GESSISARVLINYELPTKKETYMRRMATCLGADGIVINMVVGGEVVTLKSMEESSGLTVA 200

Query: 391 EMPIHIFEML 362
           EMP+HI E+L
Sbjct: 201 EMPMHISEIL 210


>ref|XP_004141918.1| PREDICTED: ATP-dependent RNA helicase eIF4A-like isoform 2 [Cucumis
           sativus] gi|449448330|ref|XP_004141919.1| PREDICTED:
           ATP-dependent RNA helicase eIF4A-like isoform 3 [Cucumis
           sativus] gi|449530829|ref|XP_004172394.1| PREDICTED:
           ATP-dependent RNA helicase eIF4A-like isoform 2 [Cucumis
           sativus]
          Length = 211

 Score =  272 bits (696), Expect = 1e-70
 Identities = 139/190 (73%), Positives = 161/190 (84%)
 Frame = -2

Query: 931 QRHFYLAVDRLQFKMETLVELLGMACRRPCLPMVVCCSTRDELDAVCSAVSNLSYVSISP 752
           QRHFY+AVDRLQFKMETLV LL +A RRP LPMVVCCS+RDELD+VCSAVSNL Y+S++ 
Sbjct: 22  QRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLAS 81

Query: 751 LYSDLSEVDRSLVLDKFRQGTIKWNKNATIQCADDEETGKEELKSRMIVATDACLPLLAS 572
           LYSDL+E DRSL+L+KFRQ T +W++  +    +  E  K   KS MIV TDACLPLLAS
Sbjct: 82  LYSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLAS 141

Query: 571 GEAPVSARVLINYELPTKKETYMRRMATCLAADGIVINMVVGGEVVTLKSIEESSSLVIA 392
           GE+P+SA VLINYE+PTKKETYMRRM TC A+DGI+INMVVGGEVVTLKSIEESS LVIA
Sbjct: 142 GESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVIA 201

Query: 391 EMPIHIFEML 362
           EMPI+I E+L
Sbjct: 202 EMPINISEIL 211


>ref|XP_004141917.1| PREDICTED: ATP-dependent RNA helicase eIF4A-like isoform 1 [Cucumis
           sativus] gi|449530827|ref|XP_004172393.1| PREDICTED:
           ATP-dependent RNA helicase eIF4A-like isoform 1 [Cucumis
           sativus]
          Length = 233

 Score =  269 bits (688), Expect = 9e-70
 Identities = 137/190 (72%), Positives = 160/190 (84%)
 Frame = -2

Query: 931 QRHFYLAVDRLQFKMETLVELLGMACRRPCLPMVVCCSTRDELDAVCSAVSNLSYVSISP 752
           QRHFY+AVDRLQFKMETLV LL +A RRP LPMVVCCS+RDELD+VCSAVSNL Y+S++ 
Sbjct: 22  QRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLAS 81

Query: 751 LYSDLSEVDRSLVLDKFRQGTIKWNKNATIQCADDEETGKEELKSRMIVATDACLPLLAS 572
           LYSDL+E DRSL+L+KFRQ T +W++  +    +  E  K   KS MIV TDACLPLLAS
Sbjct: 82  LYSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLAS 141

Query: 571 GEAPVSARVLINYELPTKKETYMRRMATCLAADGIVINMVVGGEVVTLKSIEESSSLVIA 392
           GE+P+SA VLINYE+PTKKETYMRRM TC A+DGI+INMVVGGEVVTLKSIEESS LVIA
Sbjct: 142 GESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVIA 201

Query: 391 EMPIHIFEML 362
           EMPI++  +L
Sbjct: 202 EMPINVSILL 211


>ref|XP_004141920.1| PREDICTED: ATP-dependent RNA helicase eIF4A-like isoform 4 [Cucumis
           sativus] gi|449530831|ref|XP_004172395.1| PREDICTED:
           ATP-dependent RNA helicase eIF4A-like isoform 3 [Cucumis
           sativus]
          Length = 208

 Score =  268 bits (684), Expect = 3e-69
 Identities = 136/185 (73%), Positives = 157/185 (84%)
 Frame = -2

Query: 931 QRHFYLAVDRLQFKMETLVELLGMACRRPCLPMVVCCSTRDELDAVCSAVSNLSYVSISP 752
           QRHFY+AVDRLQFKMETLV LL +A RRP LPMVVCCS+RDELD+VCSAVSNL Y+S++ 
Sbjct: 22  QRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLAS 81

Query: 751 LYSDLSEVDRSLVLDKFRQGTIKWNKNATIQCADDEETGKEELKSRMIVATDACLPLLAS 572
           LYSDL+E DRSL+L+KFRQ T +W++  +    +  E  K   KS MIV TDACLPLLAS
Sbjct: 82  LYSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLAS 141

Query: 571 GEAPVSARVLINYELPTKKETYMRRMATCLAADGIVINMVVGGEVVTLKSIEESSSLVIA 392
           GE+P+SA VLINYE+PTKKETYMRRM TC A+DGI+INMVVGGEVVTLKSIEESS LVIA
Sbjct: 142 GESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVIA 201

Query: 391 EMPIH 377
           EMPI+
Sbjct: 202 EMPIN 206


Top