BLASTX nr result

ID: Panax21_contig00023012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023012
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276547.1| PREDICTED: chaperonin 60 subunit alpha 2, ch...   312   2e-92
emb|CBI27180.3| unnamed protein product [Vitis vinifera]              312   2e-92
ref|XP_002528171.1| rubisco subunit binding-protein alpha subuni...   300   6e-88
ref|XP_004145436.1| PREDICTED: chaperonin 60 subunit alpha 2, ch...   300   2e-87
ref|XP_003528549.1| PREDICTED: ruBisCO large subunit-binding pro...   290   3e-84

>ref|XP_002276547.1| PREDICTED: chaperonin 60 subunit alpha 2, chloroplastic-like [Vitis
           vinifera]
          Length = 602

 Score =  312 bits (800), Expect(2) = 2e-92
 Identities = 158/187 (84%), Positives = 178/187 (95%)
 Frame = -3

Query: 563 LQIDKGYMSPHFITNQDKSIVDFENARVLVTDQKISTVKEIVPLLEKTTQLTVPLLIIAE 384
           ++IDKGYMSPHFITNQDKSIV+FENA+VLVTDQKIST+K IVPLLEKTTQL+VPLLIIAE
Sbjct: 253 MKIDKGYMSPHFITNQDKSIVEFENAKVLVTDQKISTIKGIVPLLEKTTQLSVPLLIIAE 312

Query: 383 DISRQVLETMVLNKMRGLLNVAVIKCPGLGEGKKALLQDIALMTGADFLSGDLGLSLEGA 204
           DIS QVLET+V+NKM+G++NVAV+KCPG GEGKKALLQDIAL+TGADFLSGDLGL+L+ A
Sbjct: 313 DISSQVLETLVVNKMQGIINVAVVKCPGFGEGKKALLQDIALLTGADFLSGDLGLTLDSA 372

Query: 203 TSDQLGIARKIIITSNTTTIVADPSTKAELQARISQIKKDLAESDSGYMSRKLSERIAKL 24
           TSDQLGIARK+ ITSN+TT VADPSTK E+QARI QIKKDLAE+DS Y+SRKLSERIAKL
Sbjct: 373 TSDQLGIARKVTITSNSTTFVADPSTKPEIQARILQIKKDLAETDSSYLSRKLSERIAKL 432

Query: 23  SGGVAII 3
           SGGVAII
Sbjct: 433 SGGVAII 439



 Score = 53.1 bits (126), Expect(2) = 2e-92
 Identities = 24/28 (85%), Positives = 28/28 (100%)
 Frame = -1

Query: 721 AVASISAGNDEFIGNLIAESINKIGPDG 638
           AVASISAGND+F+GNLIAE+I+KIGPDG
Sbjct: 206 AVASISAGNDDFVGNLIAEAIDKIGPDG 233


>emb|CBI27180.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  312 bits (800), Expect(2) = 2e-92
 Identities = 158/187 (84%), Positives = 178/187 (95%)
 Frame = -3

Query: 563 LQIDKGYMSPHFITNQDKSIVDFENARVLVTDQKISTVKEIVPLLEKTTQLTVPLLIIAE 384
           ++IDKGYMSPHFITNQDKSIV+FENA+VLVTDQKIST+K IVPLLEKTTQL+VPLLIIAE
Sbjct: 234 MKIDKGYMSPHFITNQDKSIVEFENAKVLVTDQKISTIKGIVPLLEKTTQLSVPLLIIAE 293

Query: 383 DISRQVLETMVLNKMRGLLNVAVIKCPGLGEGKKALLQDIALMTGADFLSGDLGLSLEGA 204
           DIS QVLET+V+NKM+G++NVAV+KCPG GEGKKALLQDIAL+TGADFLSGDLGL+L+ A
Sbjct: 294 DISSQVLETLVVNKMQGIINVAVVKCPGFGEGKKALLQDIALLTGADFLSGDLGLTLDSA 353

Query: 203 TSDQLGIARKIIITSNTTTIVADPSTKAELQARISQIKKDLAESDSGYMSRKLSERIAKL 24
           TSDQLGIARK+ ITSN+TT VADPSTK E+QARI QIKKDLAE+DS Y+SRKLSERIAKL
Sbjct: 354 TSDQLGIARKVTITSNSTTFVADPSTKPEIQARILQIKKDLAETDSSYLSRKLSERIAKL 413

Query: 23  SGGVAII 3
           SGGVAII
Sbjct: 414 SGGVAII 420



 Score = 53.1 bits (126), Expect(2) = 2e-92
 Identities = 24/28 (85%), Positives = 28/28 (100%)
 Frame = -1

Query: 721 AVASISAGNDEFIGNLIAESINKIGPDG 638
           AVASISAGND+F+GNLIAE+I+KIGPDG
Sbjct: 187 AVASISAGNDDFVGNLIAEAIDKIGPDG 214


>ref|XP_002528171.1| rubisco subunit binding-protein alpha subunit, ruba, putative
           [Ricinus communis] gi|223532428|gb|EEF34222.1| rubisco
           subunit binding-protein alpha subunit, ruba, putative
           [Ricinus communis]
          Length = 556

 Score =  300 bits (768), Expect(2) = 6e-88
 Identities = 152/187 (81%), Positives = 176/187 (94%)
 Frame = -3

Query: 563 LQIDKGYMSPHFITNQDKSIVDFENARVLVTDQKISTVKEIVPLLEKTTQLTVPLLIIAE 384
           ++IDKGYMSP FITNQ+KS+V+F NARVLVTDQ+I+TVKEIVPLLEKT QL+VPLLI AE
Sbjct: 207 MKIDKGYMSPQFITNQEKSLVEFNNARVLVTDQRIATVKEIVPLLEKTMQLSVPLLIFAE 266

Query: 383 DISRQVLETMVLNKMRGLLNVAVIKCPGLGEGKKALLQDIALMTGADFLSGDLGLSLEGA 204
           D+S+QVLET+V+NKM+GLLNVAV+KCPG GEGKKALLQDIALMTGADFLSGD GL+L GA
Sbjct: 267 DMSKQVLETLVVNKMQGLLNVAVVKCPGFGEGKKALLQDIALMTGADFLSGDFGLTLMGA 326

Query: 203 TSDQLGIARKIIITSNTTTIVADPSTKAELQARISQIKKDLAESDSGYMSRKLSERIAKL 24
           TSDQLGIA+K+ ITSN+TTIVAD STKAE+QARI Q+KKDLAE+D+ Y+SRKLSERIAKL
Sbjct: 327 TSDQLGIAQKVTITSNSTTIVADSSTKAEIQARILQMKKDLAETDNKYLSRKLSERIAKL 386

Query: 23  SGGVAII 3
           SGGVA+I
Sbjct: 387 SGGVALI 393



 Score = 50.8 bits (120), Expect(2) = 6e-88
 Identities = 24/28 (85%), Positives = 27/28 (96%)
 Frame = -1

Query: 721 AVASISAGNDEFIGNLIAESINKIGPDG 638
           AVASISAGNDEF+GNLIAE+I+KIG DG
Sbjct: 160 AVASISAGNDEFVGNLIAETIDKIGNDG 187


>ref|XP_004145436.1| PREDICTED: chaperonin 60 subunit alpha 2, chloroplastic-like
           [Cucumis sativus]
          Length = 587

 Score =  300 bits (767), Expect(2) = 2e-87
 Identities = 152/187 (81%), Positives = 177/187 (94%)
 Frame = -3

Query: 563 LQIDKGYMSPHFITNQDKSIVDFENARVLVTDQKISTVKEIVPLLEKTTQLTVPLLIIAE 384
           ++IDKGYMSP FITNQDKSIV+F+NA+VLVTDQ+IS+VKEIVPLLEKT QL++PLLI AE
Sbjct: 238 MKIDKGYMSPQFITNQDKSIVEFDNAKVLVTDQRISSVKEIVPLLEKTVQLSLPLLIFAE 297

Query: 383 DISRQVLETMVLNKMRGLLNVAVIKCPGLGEGKKALLQDIALMTGADFLSGDLGLSLEGA 204
           DIS +VLET+V+NK++GL+NVAV+KCPG+GE KKALLQDIALMTGADFLSGDLGL LEGA
Sbjct: 298 DISIKVLETLVVNKIQGLVNVAVVKCPGVGERKKALLQDIALMTGADFLSGDLGLGLEGA 357

Query: 203 TSDQLGIARKIIITSNTTTIVADPSTKAELQARISQIKKDLAESDSGYMSRKLSERIAKL 24
           TSDQLGIARK++ITSN+TTIVADPSTK E+QARISQIKKDL E+D+  +SRKLSERIAKL
Sbjct: 358 TSDQLGIARKVVITSNSTTIVADPSTKDEIQARISQIKKDLVETDNPNLSRKLSERIAKL 417

Query: 23  SGGVAII 3
           SGGVA+I
Sbjct: 418 SGGVAVI 424



 Score = 49.7 bits (117), Expect(2) = 2e-87
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = -1

Query: 721 AVASISAGNDEFIGNLIAESINKIGPDG 638
           AVA IS+GNDE++GNLIAE+I KIGPDG
Sbjct: 191 AVAMISSGNDEYVGNLIAEAIEKIGPDG 218


>ref|XP_003528549.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
           chloroplastic-like [Glycine max]
          Length = 548

 Score =  290 bits (742), Expect(2) = 3e-84
 Identities = 147/187 (78%), Positives = 170/187 (90%)
 Frame = -3

Query: 563 LQIDKGYMSPHFITNQDKSIVDFENARVLVTDQKISTVKEIVPLLEKTTQLTVPLLIIAE 384
           ++ DKGYMSPHFITNQ+KSIV+F+  +VLVTDQKIS VKEIVPLLEK  QL+VPLLIIAE
Sbjct: 199 MKFDKGYMSPHFITNQEKSIVEFDWVKVLVTDQKISNVKEIVPLLEKAMQLSVPLLIIAE 258

Query: 383 DISRQVLETMVLNKMRGLLNVAVIKCPGLGEGKKALLQDIALMTGADFLSGDLGLSLEGA 204
           DI+RQVLET+V+NKM+GLL VAV+KCPG G  KKALLQDIALMTGADFLSGDLGL+L+GA
Sbjct: 259 DITRQVLETLVVNKMQGLLRVAVVKCPGFGGAKKALLQDIALMTGADFLSGDLGLTLDGA 318

Query: 203 TSDQLGIARKIIITSNTTTIVADPSTKAELQARISQIKKDLAESDSGYMSRKLSERIAKL 24
           TSDQLG A K+ ITSN TTI+ADPS KAE+QARISQIKKDL+E+D+  +SRKLSERIAKL
Sbjct: 319 TSDQLGTALKVTITSNATTIIADPSMKAEIQARISQIKKDLSETDNANLSRKLSERIAKL 378

Query: 23  SGGVAII 3
           SGG+A+I
Sbjct: 379 SGGIAVI 385



 Score = 48.5 bits (114), Expect(2) = 3e-84
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = -1

Query: 721 AVASISAGNDEFIGNLIAESINKIGPDG 638
           AVASISAGNDE++GNLIAE++ KIG DG
Sbjct: 152 AVASISAGNDEYVGNLIAEAMEKIGSDG 179


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