BLASTX nr result

ID: Panax21_contig00022962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022962
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313577.1| predicted protein [Populus trichocarpa] gi|2...   229   4e-58
ref|XP_003616331.1| Nucleolar complex protein-like protein [Medi...   214   1e-53
ref|XP_003544990.1| PREDICTED: nucleolar complex protein 4 homol...   208   6e-52
ref|NP_179316.2| CCAAT-binding factor [Arabidopsis thaliana] gi|...   202   5e-50
ref|XP_003519333.1| PREDICTED: nucleolar complex protein 4 homol...   202   5e-50

>ref|XP_002313577.1| predicted protein [Populus trichocarpa] gi|222849985|gb|EEE87532.1|
           predicted protein [Populus trichocarpa]
          Length = 575

 Score =  229 bits (583), Expect = 4e-58
 Identities = 120/215 (55%), Positives = 156/215 (72%), Gaps = 5/215 (2%)
 Frame = +3

Query: 3   TWLRSKFDELAQSLIEIAVSSDSEPTLREVVLDTIMEFVKVGNGGRFHSAIFHKLIHTIV 182
           TWLRSKFDE  +SL+++AVS  +E  L+EVVLDT+MEFVK GNGGRF+SAI+H+ +  IV
Sbjct: 88  TWLRSKFDEFVKSLVDVAVSPKAEDALKEVVLDTLMEFVKTGNGGRFNSAIYHRFLVNIV 147

Query: 183 ESTSGVDTLSDFLESKYFKYIDVRFFTYISLEKLVRNLEMKNISDDKNVTDNG-----SH 347
           +ST  +D + + L SKYFKYID+R+FTYI++EK  +NLE+K+ISD K  T++G     S 
Sbjct: 148 QSTESLDFVLELLASKYFKYIDIRYFTYINIEKFAKNLELKDISDGK--TESGDKVGESD 205

Query: 348 PRVSTELSVHNIHHILSHIPPLEALDEKSEYEMWNGSGIFIKEGNHKKHVEVLKAEDKKR 527
            R S ELS++ IH+I+S+IPPLE   + S+YE+W GSG       H      LK EDK  
Sbjct: 206 SRESLELSIYKIHYIISNIPPLEDPKQNSDYELWGGSG----PSQH------LKTEDKDL 255

Query: 528 KTKNNGDSVPSAVNVAKKMKLKFTKAWISFLSLPL 632
           K++ + + V SA N AKKMKLKFTKAWISFL LPL
Sbjct: 256 KSEKHDNDVLSAGNYAKKMKLKFTKAWISFLRLPL 290


>ref|XP_003616331.1| Nucleolar complex protein-like protein [Medicago truncatula]
           gi|355517666|gb|AES99289.1| Nucleolar complex
           protein-like protein [Medicago truncatula]
          Length = 607

 Score =  214 bits (544), Expect = 1e-53
 Identities = 108/213 (50%), Positives = 148/213 (69%), Gaps = 3/213 (1%)
 Frame = +3

Query: 3   TWLRSKFDELAQSLIEIAVSSDSEPTLREVVLDTIMEFVKVGNGGRFHSAIFHKLIHTIV 182
           TWLRSKFDE  + LI++ V+ +S+ T++EVVLDT+MEFVKV NGG FHS+++++++ +I+
Sbjct: 98  TWLRSKFDEFLKLLIDVLVADESDETIKEVVLDTLMEFVKVANGGAFHSSLYNRILRSII 157

Query: 183 ESTSGVDTLSDFLESKYFKYIDVRFFTYISLEKLVRNLEMKNISDDKNVTDNG---SHPR 353
            STS  + L D L SKYFKYIDVR+FT+ISLEKL RNL+ K+ SDDK  + +G   S   
Sbjct: 158 HSTSNAEFLIDLLISKYFKYIDVRYFTFISLEKLTRNLDGKDASDDKTASADGTDESQLS 217

Query: 354 VSTELSVHNIHHILSHIPPLEALDEKSEYEMWNGSGIFIKEGNHKKHVEVLKAEDKKRKT 533
            STE  +HN+++ +SHIPPLE  D+ S  EMW+                    +DK+ K+
Sbjct: 218 SSTEFIIHNMYYTISHIPPLEKSDDTSHLEMWS------------------LTDDKQLKS 259

Query: 534 KNNGDSVPSAVNVAKKMKLKFTKAWISFLSLPL 632
           K   ++V SA  +AKKMKLKFTKAWI++L LPL
Sbjct: 260 KKRNNNVLSAARIAKKMKLKFTKAWIAYLRLPL 292


>ref|XP_003544990.1| PREDICTED: nucleolar complex protein 4 homolog [Glycine max]
          Length = 600

 Score =  208 bits (530), Expect = 6e-52
 Identities = 109/213 (51%), Positives = 148/213 (69%), Gaps = 3/213 (1%)
 Frame = +3

Query: 3   TWLRSKFDELAQSLIEIAVSSDSEPTLREVVLDTIMEFVKVGNGGRFHSAIFHKLIHTIV 182
           +WLRSKFDE  +SL+++  S   + TL+E+VLDT+MEFVKV NGG FHS+++HKL+ +IV
Sbjct: 92  SWLRSKFDEFLKSLLDVLASPQGDETLKELVLDTLMEFVKVSNGGAFHSSLYHKLLCSIV 151

Query: 183 ESTSGVDTLSDFLESKYFKYIDVRFFTYISLEKLVRNLEMKNISDDKNV-TDNGSHPRVS 359
            STS    L D L SKYFKYIDVR+FT+ISL+KL   LE K++SDDK    D  S  ++S
Sbjct: 152 YSTSPPTFLVDLLASKYFKYIDVRYFTFISLKKLASTLEGKDVSDDKIANADGSSESQMS 211

Query: 360 T--ELSVHNIHHILSHIPPLEALDEKSEYEMWNGSGIFIKEGNHKKHVEVLKAEDKKRKT 533
           +  E  +HN+++ +SH+PP +  D  SE EMW+ S     E +HK+      A+DK +K 
Sbjct: 212 SNMECVIHNMYYTISHVPPHQGSDNTSELEMWSSS-----ESDHKQLYGDKGADDKPQKF 266

Query: 534 KNNGDSVPSAVNVAKKMKLKFTKAWISFLSLPL 632
           +    +V SA  +AKKMKLKFTKAWI++L LPL
Sbjct: 267 QKPNKNVLSAAKIAKKMKLKFTKAWIAYLRLPL 299


>ref|NP_179316.2| CCAAT-binding factor [Arabidopsis thaliana]
           gi|330251509|gb|AEC06603.1| CCAAT-binding factor
           [Arabidopsis thaliana]
          Length = 577

 Score =  202 bits (513), Expect = 5e-50
 Identities = 107/212 (50%), Positives = 142/212 (66%), Gaps = 3/212 (1%)
 Frame = +3

Query: 6   WLRSKFDELAQSLIEIAVSSDSEPTLREVVLDTIMEFVKVGNGGRFHSAIFHKLIHTIVE 185
           WLRSKFDE  + L+++ VS  SE +LR +VL T+MEFVK+ N GRFHS+I+H+L+  I+ 
Sbjct: 93  WLRSKFDEFVKLLLDVLVSQQSEDSLRGIVLGTLMEFVKLLNAGRFHSSIYHRLLDAIIH 152

Query: 186 STSGVDTLSDFLESKYFKYIDVRFFTYISLEKLVRNLEMKNISDDKNVTDNG---SHPRV 356
           S   ++   D L SKYFKYIDVR+FTYIS+EK V+ LE  ++S D+ V +N    S  + 
Sbjct: 153 SEVDIEIFLDILTSKYFKYIDVRYFTYISMEKFVKTLE-ASVSADRTVIENNEAESDSKE 211

Query: 357 STELSVHNIHHILSHIPPLEALDEKSEYEMWNGSGIFIKEGNHKKHVEVLKAEDKKRKTK 536
           S ELSV  I+ +LS IPP E   EKS++EMW+GS   I E          K  DKK+KT+
Sbjct: 212 SLELSVRKIYQVLSQIPPPEKQAEKSQHEMWSGSDESISE----------KPTDKKKKTE 261

Query: 537 NNGDSVPSAVNVAKKMKLKFTKAWISFLSLPL 632
               ++ S   ++K+MKLKFTKAWISFL LPL
Sbjct: 262 KGDSTLLSPATISKRMKLKFTKAWISFLRLPL 293


>ref|XP_003519333.1| PREDICTED: nucleolar complex protein 4 homolog [Glycine max]
          Length = 581

 Score =  202 bits (513), Expect = 5e-50
 Identities = 104/211 (49%), Positives = 146/211 (69%), Gaps = 2/211 (0%)
 Frame = +3

Query: 6   WLRSKFDELAQSLIEIAVSSDSEPTLREVVLDTIMEFVKVGNGGRFHSAIFHKLIHTIVE 185
           WLRSKFDE  +SL+++  S   + TL+E+VLDT+MEFVKV NGG FHS+++HKL+H+IV 
Sbjct: 88  WLRSKFDEFLKSLLDVLASPQGDETLKELVLDTLMEFVKVANGGAFHSSLYHKLLHSIVY 147

Query: 186 STSGVDTLSDFLESKYFKYIDVRFFTYISLEKLVRNLEMKNISDDKNVTDNGSHPRVST- 362
           S+S    L D L +KYFKYIDVR+FT+ISL+KL   LE K++S      D  S  ++S+ 
Sbjct: 148 SSSPPTFLVDLLATKYFKYIDVRYFTFISLKKLASTLEGKDVS---GAADGTSESQLSSN 204

Query: 363 -ELSVHNIHHILSHIPPLEALDEKSEYEMWNGSGIFIKEGNHKKHVEVLKAEDKKRKTKN 539
            E  +HN+++ +SH+PP +  D  S+ EMW+ S     E +HK+      A+DK +K++ 
Sbjct: 205 MECVIHNMYYTISHVPPHKGSDNTSDLEMWSSS-----ESDHKQLSGDKGADDKPQKSQK 259

Query: 540 NGDSVPSAVNVAKKMKLKFTKAWISFLSLPL 632
              +V SA  +AKKMKLKFTKAWI++L LPL
Sbjct: 260 PNKNVLSAAKIAKKMKLKFTKAWIAYLRLPL 290


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