BLASTX nr result

ID: Panax21_contig00022956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022956
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137426.1| PREDICTED: uncharacterized protein LOC101221...    77   2e-12
ref|XP_002280975.2| PREDICTED: uncharacterized protein LOC100248...    76   3e-12
emb|CBI15135.3| unnamed protein product [Vitis vinifera]               76   3e-12
ref|XP_002514667.1| RNA polymerase-associated protein LEO1, puta...    67   1e-09

>ref|XP_004137426.1| PREDICTED: uncharacterized protein LOC101221752 [Cucumis sativus]
           gi|449486962|ref|XP_004157455.1| PREDICTED:
           uncharacterized protein LOC101229895 [Cucumis sativus]
          Length = 623

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 50/122 (40%), Positives = 57/122 (46%)
 Frame = +2

Query: 14  VGEEKRHQMMQNLFGDQXXXXXXXXXXXXXXNRQPDYASDDGDXXXXXXXXXXXXXXXXX 193
           +GEEKRHQMMQNLFGDQ              N QP+YASD+G+                 
Sbjct: 1   MGEEKRHQMMQNLFGDQSEEEEEIDSEHES-NPQPNYASDEGEGGAEPEGEGEV------ 53

Query: 194 XXXXXXXXXXXXXXXXXXXXGQGXXXXXXXSDGELHDADPVHGESEGERDQSSQEVEVGD 373
                                +G       S+GEL DADP  GESEGERDQSSQEV+VG 
Sbjct: 54  ---------------------EGHGEVEIESEGELQDADPDPGESEGERDQSSQEVDVGH 92

Query: 374 QR 379
            R
Sbjct: 93  HR 94


>ref|XP_002280975.2| PREDICTED: uncharacterized protein LOC100248444 [Vitis vinifera]
          Length = 623

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 47/122 (38%), Positives = 54/122 (44%)
 Frame = +2

Query: 14  VGEEKRHQMMQNLFGDQXXXXXXXXXXXXXXNRQPDYASDDGDXXXXXXXXXXXXXXXXX 193
           +GE KRHQMMQNLFGDQ              N QP Y SD+G+                 
Sbjct: 1   MGEHKRHQMMQNLFGDQSEEEEEEIDSEHESNPQPGYISDEGEGGPEPEGEGEI------ 54

Query: 194 XXXXXXXXXXXXXXXXXXXXGQGXXXXXXXSDGELHDADPVHGESEGERDQSSQEVEVGD 373
                                +G       S+GEL D DP  GESE ERDQSS++VEVGD
Sbjct: 55  ---------------------EGQGEAEVESEGELRDVDPDPGESEAERDQSSEDVEVGD 93

Query: 374 QR 379
           QR
Sbjct: 94  QR 95


>emb|CBI15135.3| unnamed protein product [Vitis vinifera]
          Length = 622

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 47/122 (38%), Positives = 54/122 (44%)
 Frame = +2

Query: 14  VGEEKRHQMMQNLFGDQXXXXXXXXXXXXXXNRQPDYASDDGDXXXXXXXXXXXXXXXXX 193
           +GE KRHQMMQNLFGDQ              N QP Y SD+G+                 
Sbjct: 1   MGEHKRHQMMQNLFGDQSEEEEEEIDSEHESNPQPGYISDEGEGGPEPEGEGEI------ 54

Query: 194 XXXXXXXXXXXXXXXXXXXXGQGXXXXXXXSDGELHDADPVHGESEGERDQSSQEVEVGD 373
                                +G       S+GEL D DP  GESE ERDQSS++VEVGD
Sbjct: 55  ---------------------EGQGEAEVESEGELRDVDPDPGESEAERDQSSEDVEVGD 93

Query: 374 QR 379
           QR
Sbjct: 94  QR 95


>ref|XP_002514667.1| RNA polymerase-associated protein LEO1, putative [Ricinus communis]
           gi|223546271|gb|EEF47773.1| RNA polymerase-associated
           protein LEO1, putative [Ricinus communis]
          Length = 629

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 41/122 (33%), Positives = 54/122 (44%)
 Frame = +2

Query: 14  VGEEKRHQMMQNLFGDQXXXXXXXXXXXXXXNRQPDYASDDGDXXXXXXXXXXXXXXXXX 193
           +GEEKRHQMMQNLFGDQ              N QP+YASD+ +                 
Sbjct: 1   MGEEKRHQMMQNLFGDQSEDEEEEIDSEHESNPQPNYASDEAEGGLRNEGEGEDEV---- 56

Query: 194 XXXXXXXXXXXXXXXXXXXXGQGXXXXXXXSDGELHDADPVHGESEGERDQSSQEVEVGD 373
                                +G       SD E+ + DP   ESEGER+ SS+E+++GD
Sbjct: 57  ---------------------EGNEEAEVVSDVEMREVDPDPRESEGEREASSEEIDIGD 95

Query: 374 QR 379
           +R
Sbjct: 96  ER 97


Top