BLASTX nr result

ID: Panax21_contig00022955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022955
         (780 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275926.1| PREDICTED: zinc finger CCCH domain-containin...   181   2e-43
emb|CAN83255.1| hypothetical protein VITISV_036981 [Vitis vinifera]   181   2e-43
emb|CBI20604.3| unnamed protein product [Vitis vinifera]              164   3e-38
gb|ABK92961.1| unknown [Populus trichocarpa]                          162   6e-38
gb|ADL36656.1| C3HL domain class transcription factor [Malus x d...   153   4e-35

>ref|XP_002275926.1| PREDICTED: zinc finger CCCH domain-containing protein 20 [Vitis
           vinifera]
          Length = 379

 Score =  181 bits (458), Expect = 2e-43
 Identities = 94/125 (75%), Positives = 104/125 (83%)
 Frame = +1

Query: 10  FNSVSELAGSMRSLQIGKASRMSMSPPSWGVQMGSGFGSPRTSSTLRPGFISLPATPTRN 189
           FNS+SEL  SMR+LQ+GKA    MSP SWGVQMGSGFGSPR  STLRPGF SLP+TPTR 
Sbjct: 260 FNSMSELVASMRNLQVGKAK---MSPQSWGVQMGSGFGSPR-GSTLRPGFCSLPSTPTRT 315

Query: 190 LTRSGLGVFELWDQSCEEEPVMERVESGRDLRAKIYAKLSKENSLARVDSSGSGPDVGWV 369
             RSGLG  ++WD++CEEEP MERVESGRDLRA+IYAK+SKENSL R DSS S PD GWV
Sbjct: 316 PARSGLGGLDVWDKTCEEEPAMERVESGRDLRARIYAKISKENSLDR-DSSPSAPDFGWV 374

Query: 370 SELVK 384
           SELVK
Sbjct: 375 SELVK 379


>emb|CAN83255.1| hypothetical protein VITISV_036981 [Vitis vinifera]
          Length = 426

 Score =  181 bits (458), Expect = 2e-43
 Identities = 94/125 (75%), Positives = 104/125 (83%)
 Frame = +1

Query: 10  FNSVSELAGSMRSLQIGKASRMSMSPPSWGVQMGSGFGSPRTSSTLRPGFISLPATPTRN 189
           FNS+SEL  SMR+LQ+GKA    MSP SWGVQMGSGFGSPR  STLRPGF SLP+TPTR 
Sbjct: 307 FNSMSELVASMRNLQVGKAK---MSPQSWGVQMGSGFGSPR-GSTLRPGFCSLPSTPTRT 362

Query: 190 LTRSGLGVFELWDQSCEEEPVMERVESGRDLRAKIYAKLSKENSLARVDSSGSGPDVGWV 369
             RSGLG  ++WD++CEEEP MERVESGRDLRA+IYAK+SKENSL R DSS S PD GWV
Sbjct: 363 PARSGLGGLDVWDKTCEEEPAMERVESGRDLRARIYAKISKENSLDR-DSSPSAPDFGWV 421

Query: 370 SELVK 384
           SELVK
Sbjct: 422 SELVK 426


>emb|CBI20604.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score =  164 bits (414), Expect = 3e-38
 Identities = 85/113 (75%), Positives = 94/113 (83%)
 Frame = +1

Query: 46  SLQIGKASRMSMSPPSWGVQMGSGFGSPRTSSTLRPGFISLPATPTRNLTRSGLGVFELW 225
           +LQ+GKA    MSP SWGVQMGSGFGSPR  STLRPGF SLP+TPTR   RSGLG  ++W
Sbjct: 199 NLQVGKAK---MSPQSWGVQMGSGFGSPR-GSTLRPGFCSLPSTPTRTPARSGLGGLDVW 254

Query: 226 DQSCEEEPVMERVESGRDLRAKIYAKLSKENSLARVDSSGSGPDVGWVSELVK 384
           D++CEEEP MERVESGRDLRA+IYAK+SKENSL R DSS S PD GWVSELVK
Sbjct: 255 DKTCEEEPAMERVESGRDLRARIYAKISKENSLDR-DSSPSAPDFGWVSELVK 306


>gb|ABK92961.1| unknown [Populus trichocarpa]
          Length = 384

 Score =  162 bits (411), Expect = 6e-38
 Identities = 94/132 (71%), Positives = 103/132 (78%), Gaps = 7/132 (5%)
 Frame = +1

Query: 10  FNSVSELAGSMRSLQIGKASRMSMSPP--SWGVQMGSGFGSPRTSSTLRPGFISLPATPT 183
           FNS+SEL  SMR LQ+GK   M +  P  SWGVQ GS FGSPR SS LRPGF SLP+TPT
Sbjct: 257 FNSMSELLASMRGLQLGK---MKIGSPVGSWGVQSGSRFGSPRGSS-LRPGFCSLPSTPT 312

Query: 184 RNL-TRSGLGVFELWDQS--CEEEPVMERVESGRDLRAKIYAKLSKENSL--ARVDSSGS 348
           R + TRSGLG  ++W  S  CEEEP MERVESGRDLRAKIYAKLSKENSL   RV+S+ S
Sbjct: 313 RTMVTRSGLGQLDIWGDSSTCEEEPAMERVESGRDLRAKIYAKLSKENSLDPDRVESAVS 372

Query: 349 GPDVGWVSELVK 384
           GPDVGWVSELVK
Sbjct: 373 GPDVGWVSELVK 384


>gb|ADL36656.1| C3HL domain class transcription factor [Malus x domestica]
          Length = 369

 Score =  153 bits (387), Expect = 4e-35
 Identities = 82/129 (63%), Positives = 91/129 (70%), Gaps = 4/129 (3%)
 Frame = +1

Query: 7   GFNSVSELAGSMRSLQIGKASRMSM-SPPSWGVQMGSGFGSPRTSSTLRPGFISLPATPT 183
           G NSVSEL  SMR+ ++ K   M M SPPSWG QMGSGFG     S  R GF SLP TPT
Sbjct: 242 GRNSVSELVASMRNFKLAK---MKMNSPPSWGAQMGSGFGPSPRGSAFRSGFCSLPLTPT 298

Query: 184 RNLTRSGLGVFELWDQSCEEEPVMERVESGRDLRAKIYAKLSKENS---LARVDSSGSGP 354
           R   R G    +LWDQ C EEP MERVESGRDLRA++YA+LSKENS   +ARVDS  S P
Sbjct: 299 RTTVRVGPNPVDLWDQRCGEEPAMERVESGRDLRARMYARLSKENSFGRVARVDSGSSAP 358

Query: 355 DVGWVSELV 381
           DVGW+SELV
Sbjct: 359 DVGWISELV 367


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