BLASTX nr result
ID: Panax21_contig00022940
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00022940 (457 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN77580.1| hypothetical protein VITISV_015346 [Vitis vinifera] 100 1e-34 ref|XP_002278276.1| PREDICTED: pentatricopeptide repeat-containi... 100 1e-34 ref|XP_002873104.1| predicted protein [Arabidopsis lyrata subsp.... 105 2e-33 emb|CAB83319.1| putative protein [Arabidopsis thaliana] 100 1e-32 ref|NP_001154694.1| nucleobase:cation symporter-1, NCS1 family [... 100 1e-32 >emb|CAN77580.1| hypothetical protein VITISV_015346 [Vitis vinifera] Length = 347 Score = 99.8 bits (247), Expect(2) = 1e-34 Identities = 47/62 (75%), Positives = 55/62 (88%) Frame = -1 Query: 457 EGLSKDGLTHEALQLFSQMKDGGNMPDVVAHTAVIEAYANAGQAKEASKTFMRMLACGVS 278 + LSKDGLTHEA++LF+Q+KD G+MPDVVAHTAVIEAYANAGQ+KEA K +MRML GV Sbjct: 190 DALSKDGLTHEAMELFAQIKDHGHMPDVVAHTAVIEAYANAGQSKEAVKVYMRMLTSGVM 249 Query: 277 PN 272 PN Sbjct: 250 PN 251 Score = 71.6 bits (174), Expect(2) = 1e-34 Identities = 39/59 (66%), Positives = 45/59 (76%) Frame = -3 Query: 179 YTYSVLIKGLAASGDRKLLKEARKYVVEMLGKGMRVNVGTYVSVFEAIAKMGIAEEGKE 3 YTYSVLIKGLA GD KL EA+KYV+EM+GKGMR N GTY ++FE AK EEG+E Sbjct: 253 YTYSVLIKGLA--GDAKL-GEAKKYVLEMMGKGMRPNAGTYTALFEGFAKEQKVEEGRE 308 >ref|XP_002278276.1| PREDICTED: pentatricopeptide repeat-containing protein At4g38150-like [Vitis vinifera] Length = 307 Score = 99.8 bits (247), Expect(2) = 1e-34 Identities = 47/62 (75%), Positives = 55/62 (88%) Frame = -1 Query: 457 EGLSKDGLTHEALQLFSQMKDGGNMPDVVAHTAVIEAYANAGQAKEASKTFMRMLACGVS 278 + LSKDGLTHEA++LF+Q+KD G+MPDVVAHTAVIEAYANAGQ+KEA K +MRML GV Sbjct: 150 DALSKDGLTHEAMELFAQIKDHGHMPDVVAHTAVIEAYANAGQSKEAVKVYMRMLTSGVM 209 Query: 277 PN 272 PN Sbjct: 210 PN 211 Score = 71.6 bits (174), Expect(2) = 1e-34 Identities = 39/59 (66%), Positives = 45/59 (76%) Frame = -3 Query: 179 YTYSVLIKGLAASGDRKLLKEARKYVVEMLGKGMRVNVGTYVSVFEAIAKMGIAEEGKE 3 YTYSVLIKGLA GD KL EA+KYV+EM+GKGMR N GTY ++FE AK EEG+E Sbjct: 213 YTYSVLIKGLA--GDAKL-GEAKKYVLEMMGKGMRPNAGTYTALFEGFAKEQKVEEGRE 268 >ref|XP_002873104.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297318941|gb|EFH49363.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 478 Score = 105 bits (262), Expect(2) = 2e-33 Identities = 50/62 (80%), Positives = 55/62 (88%) Frame = -1 Query: 457 EGLSKDGLTHEALQLFSQMKDGGNMPDVVAHTAVIEAYANAGQAKEASKTFMRMLACGVS 278 + LSKDG THEAL+LFSQ+KD MPDVVAHTA++EAYANAGQAKEA K FMRMLACGVS Sbjct: 182 DALSKDGRTHEALELFSQIKDKNQMPDVVAHTAIVEAYANAGQAKEALKVFMRMLACGVS 241 Query: 277 PN 272 PN Sbjct: 242 PN 243 Score = 62.0 bits (149), Expect(2) = 2e-33 Identities = 32/59 (54%), Positives = 41/59 (69%) Frame = -3 Query: 179 YTYSVLIKGLAASGDRKLLKEARKYVVEMLGKGMRVNVGTYVSVFEAIAKMGIAEEGKE 3 YTY+VLIKGLAA D + LK+A+KY++EM+G GM N TY +VFEA K E +E Sbjct: 245 YTYTVLIKGLAA--DVRTLKDAKKYLLEMMGNGMSPNTATYTAVFEAFVKDEKEESARE 301 >emb|CAB83319.1| putative protein [Arabidopsis thaliana] Length = 482 Score = 100 bits (248), Expect(2) = 1e-32 Identities = 48/62 (77%), Positives = 53/62 (85%) Frame = -1 Query: 457 EGLSKDGLTHEALQLFSQMKDGGNMPDVVAHTAVIEAYANAGQAKEASKTFMRMLACGVS 278 + LSKDG THEAL+LFSQ+KD MPDVVAHTA++EAYANAGQAKE K FMRMLA GVS Sbjct: 186 DALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVS 245 Query: 277 PN 272 PN Sbjct: 246 PN 247 Score = 65.1 bits (157), Expect(2) = 1e-32 Identities = 33/59 (55%), Positives = 41/59 (69%) Frame = -3 Query: 179 YTYSVLIKGLAASGDRKLLKEARKYVVEMLGKGMRVNVGTYVSVFEAIAKMGIAEEGKE 3 YTYSVLIKGLAA G K K+A+KY++EM+G GM N TY +VFEA + G E +E Sbjct: 249 YTYSVLIKGLAADG--KTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARE 305 >ref|NP_001154694.1| nucleobase:cation symporter-1, NCS1 family [Arabidopsis thaliana] gi|332003244|gb|AED90627.1| nucleobase:cation symporter-1, NCS1 family [Arabidopsis thaliana] Length = 363 Score = 100 bits (248), Expect(2) = 1e-32 Identities = 48/62 (77%), Positives = 53/62 (85%) Frame = -1 Query: 457 EGLSKDGLTHEALQLFSQMKDGGNMPDVVAHTAVIEAYANAGQAKEASKTFMRMLACGVS 278 + LSKDG THEAL+LFSQ+KD MPDVVAHTA++EAYANAGQAKE K FMRMLA GVS Sbjct: 205 DALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVS 264 Query: 277 PN 272 PN Sbjct: 265 PN 266 Score = 65.1 bits (157), Expect(2) = 1e-32 Identities = 33/59 (55%), Positives = 41/59 (69%) Frame = -3 Query: 179 YTYSVLIKGLAASGDRKLLKEARKYVVEMLGKGMRVNVGTYVSVFEAIAKMGIAEEGKE 3 YTYSVLIKGLAA G K K+A+KY++EM+G GM N TY +VFEA + G E +E Sbjct: 268 YTYSVLIKGLAADG--KTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARE 324