BLASTX nr result

ID: Panax21_contig00022940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022940
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77580.1| hypothetical protein VITISV_015346 [Vitis vinifera]   100   1e-34
ref|XP_002278276.1| PREDICTED: pentatricopeptide repeat-containi...   100   1e-34
ref|XP_002873104.1| predicted protein [Arabidopsis lyrata subsp....   105   2e-33
emb|CAB83319.1| putative protein [Arabidopsis thaliana]               100   1e-32
ref|NP_001154694.1| nucleobase:cation symporter-1, NCS1 family [...   100   1e-32

>emb|CAN77580.1| hypothetical protein VITISV_015346 [Vitis vinifera]
          Length = 347

 Score = 99.8 bits (247), Expect(2) = 1e-34
 Identities = 47/62 (75%), Positives = 55/62 (88%)
 Frame = -1

Query: 457 EGLSKDGLTHEALQLFSQMKDGGNMPDVVAHTAVIEAYANAGQAKEASKTFMRMLACGVS 278
           + LSKDGLTHEA++LF+Q+KD G+MPDVVAHTAVIEAYANAGQ+KEA K +MRML  GV 
Sbjct: 190 DALSKDGLTHEAMELFAQIKDHGHMPDVVAHTAVIEAYANAGQSKEAVKVYMRMLTSGVM 249

Query: 277 PN 272
           PN
Sbjct: 250 PN 251



 Score = 71.6 bits (174), Expect(2) = 1e-34
 Identities = 39/59 (66%), Positives = 45/59 (76%)
 Frame = -3

Query: 179 YTYSVLIKGLAASGDRKLLKEARKYVVEMLGKGMRVNVGTYVSVFEAIAKMGIAEEGKE 3
           YTYSVLIKGLA  GD KL  EA+KYV+EM+GKGMR N GTY ++FE  AK    EEG+E
Sbjct: 253 YTYSVLIKGLA--GDAKL-GEAKKYVLEMMGKGMRPNAGTYTALFEGFAKEQKVEEGRE 308


>ref|XP_002278276.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38150-like [Vitis vinifera]
          Length = 307

 Score = 99.8 bits (247), Expect(2) = 1e-34
 Identities = 47/62 (75%), Positives = 55/62 (88%)
 Frame = -1

Query: 457 EGLSKDGLTHEALQLFSQMKDGGNMPDVVAHTAVIEAYANAGQAKEASKTFMRMLACGVS 278
           + LSKDGLTHEA++LF+Q+KD G+MPDVVAHTAVIEAYANAGQ+KEA K +MRML  GV 
Sbjct: 150 DALSKDGLTHEAMELFAQIKDHGHMPDVVAHTAVIEAYANAGQSKEAVKVYMRMLTSGVM 209

Query: 277 PN 272
           PN
Sbjct: 210 PN 211



 Score = 71.6 bits (174), Expect(2) = 1e-34
 Identities = 39/59 (66%), Positives = 45/59 (76%)
 Frame = -3

Query: 179 YTYSVLIKGLAASGDRKLLKEARKYVVEMLGKGMRVNVGTYVSVFEAIAKMGIAEEGKE 3
           YTYSVLIKGLA  GD KL  EA+KYV+EM+GKGMR N GTY ++FE  AK    EEG+E
Sbjct: 213 YTYSVLIKGLA--GDAKL-GEAKKYVLEMMGKGMRPNAGTYTALFEGFAKEQKVEEGRE 268


>ref|XP_002873104.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318941|gb|EFH49363.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 478

 Score =  105 bits (262), Expect(2) = 2e-33
 Identities = 50/62 (80%), Positives = 55/62 (88%)
 Frame = -1

Query: 457 EGLSKDGLTHEALQLFSQMKDGGNMPDVVAHTAVIEAYANAGQAKEASKTFMRMLACGVS 278
           + LSKDG THEAL+LFSQ+KD   MPDVVAHTA++EAYANAGQAKEA K FMRMLACGVS
Sbjct: 182 DALSKDGRTHEALELFSQIKDKNQMPDVVAHTAIVEAYANAGQAKEALKVFMRMLACGVS 241

Query: 277 PN 272
           PN
Sbjct: 242 PN 243



 Score = 62.0 bits (149), Expect(2) = 2e-33
 Identities = 32/59 (54%), Positives = 41/59 (69%)
 Frame = -3

Query: 179 YTYSVLIKGLAASGDRKLLKEARKYVVEMLGKGMRVNVGTYVSVFEAIAKMGIAEEGKE 3
           YTY+VLIKGLAA  D + LK+A+KY++EM+G GM  N  TY +VFEA  K    E  +E
Sbjct: 245 YTYTVLIKGLAA--DVRTLKDAKKYLLEMMGNGMSPNTATYTAVFEAFVKDEKEESARE 301


>emb|CAB83319.1| putative protein [Arabidopsis thaliana]
          Length = 482

 Score =  100 bits (248), Expect(2) = 1e-32
 Identities = 48/62 (77%), Positives = 53/62 (85%)
 Frame = -1

Query: 457 EGLSKDGLTHEALQLFSQMKDGGNMPDVVAHTAVIEAYANAGQAKEASKTFMRMLACGVS 278
           + LSKDG THEAL+LFSQ+KD   MPDVVAHTA++EAYANAGQAKE  K FMRMLA GVS
Sbjct: 186 DALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVS 245

Query: 277 PN 272
           PN
Sbjct: 246 PN 247



 Score = 65.1 bits (157), Expect(2) = 1e-32
 Identities = 33/59 (55%), Positives = 41/59 (69%)
 Frame = -3

Query: 179 YTYSVLIKGLAASGDRKLLKEARKYVVEMLGKGMRVNVGTYVSVFEAIAKMGIAEEGKE 3
           YTYSVLIKGLAA G  K  K+A+KY++EM+G GM  N  TY +VFEA  + G  E  +E
Sbjct: 249 YTYSVLIKGLAADG--KTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARE 305


>ref|NP_001154694.1| nucleobase:cation symporter-1, NCS1 family [Arabidopsis thaliana]
           gi|332003244|gb|AED90627.1| nucleobase:cation
           symporter-1, NCS1 family [Arabidopsis thaliana]
          Length = 363

 Score =  100 bits (248), Expect(2) = 1e-32
 Identities = 48/62 (77%), Positives = 53/62 (85%)
 Frame = -1

Query: 457 EGLSKDGLTHEALQLFSQMKDGGNMPDVVAHTAVIEAYANAGQAKEASKTFMRMLACGVS 278
           + LSKDG THEAL+LFSQ+KD   MPDVVAHTA++EAYANAGQAKE  K FMRMLA GVS
Sbjct: 205 DALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVS 264

Query: 277 PN 272
           PN
Sbjct: 265 PN 266



 Score = 65.1 bits (157), Expect(2) = 1e-32
 Identities = 33/59 (55%), Positives = 41/59 (69%)
 Frame = -3

Query: 179 YTYSVLIKGLAASGDRKLLKEARKYVVEMLGKGMRVNVGTYVSVFEAIAKMGIAEEGKE 3
           YTYSVLIKGLAA G  K  K+A+KY++EM+G GM  N  TY +VFEA  + G  E  +E
Sbjct: 268 YTYSVLIKGLAADG--KTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARE 324


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